RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 ZNF582Q96NG8 517 aaPredicted RBP8.22□□□□□ -1.09
HDAC9-229ENST00000622668 GORASP2Q9H8Y8 452 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 KCNIP1Q9NZI2 227 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 PIEZO2Q9H5I5 2752 aa8.22□□□□□ -1.09
HDAC9-229ENST00000622668 CDHR4A6H8M9 788 aa8.21□□□□□ -1.09
HDAC9-229ENST00000622668 WRBO00258 174 aa8.21□□□□□ -1.09
HDAC9-229ENST00000622668 CDC14BO60729 498 aa8.21□□□□□ -1.09
HDAC9-229ENST00000622668 ACTL6BO94805 426 aa8.21□□□□□ -1.09
HDAC9-229ENST00000622668 PTGER4P35408 488 aa8.21□□□□□ -1.09
HDAC9-229ENST00000622668 NUP62P37198 522 aaPredicted RBP8.21□□□□□ -1.09
HDAC9-229ENST00000622668 MAP2K6P52564 334 aa8.21□□□□□ -1.09
HDAC9-229ENST00000622668 RAB1AP62820 205 aa8.21□□□□□ -1.09
HDAC9-229ENST00000622668 PSG6Q00889 435 aa8.21□□□□□ -1.09
HDAC9-229ENST00000622668 RPL18Q07020 188 aaKnown RBP8.21□□□□□ -1.09
HDAC9-229ENST00000622668 SRSF6Q13247 344 aaKnown RBP8.21□□□□□ -1.09
HDAC9-229ENST00000622668 TSTQ16762 297 aaKnown RBP8.21□□□□□ -1.09
HDAC9-229ENST00000622668 SPATA46Q5T0L3 261 aa8.21□□□□□ -1.09
HDAC9-229ENST00000622668 OTPQ5XKR4 325 aa8.21□□□□□ -1.09
HDAC9-229ENST00000622668 MRM1Q6IN84 353 aaKnown RBP8.21□□□□□ -1.09
HDAC9-229ENST00000622668 ENKURQ8TC29 256 aa8.21□□□□□ -1.09
HDAC9-229ENST00000622668 GCDHQ92947 438 aaPredicted RBP8.21□□□□□ -1.09
HDAC9-229ENST00000622668 URM1Q9BTM9 101 aaKnown RBP8.21□□□□□ -1.09
HDAC9-229ENST00000622668 MALT1Q9UDY8 824 aa8.21□□□□□ -1.09
HDAC9-229ENST00000622668 EPG5Q9HCE0 2579 aa8.21□□□□□ -1.09
HDAC9-229ENST00000622668 HOXB9P17482 250 aaPredicted RBP8.21□□□□□ -1.1
HDAC9-229ENST00000622668 F8A1P23610 371 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 SRP14P37108 136 aaKnown RBP8.21□□□□□ -1.1
HDAC9-229ENST00000622668 PSMD7P51665 324 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 ARPC4P59998 168 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 GNB2P62879 340 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 ARF1P84077 181 aaKnown RBP8.21□□□□□ -1.1
HDAC9-229ENST00000622668 FUT7Q11130 342 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 NADK2Q4G0N4 442 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 C1orf185Q5T7R7 199 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 OLFML2AQ68BL7 652 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 KLHDC8BQ8IXV7 354 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 OR6V1Q8N148 313 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 PACRGLQ8N7B6 248 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 ELP5Q8TE02 316 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 ZNF350Q9GZX5 532 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 TINAGQ9UJW2 476 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 CENPFP49454 3210 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 KIAA0513O60268 411 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 TFPTP0C1Z6 253 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 IL18Q14116 193 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 ZNF846Q147U1 533 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 PCOLCEQ15113 449 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 HSD17B12Q53GQ0 312 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 RGS7BPQ6MZT1 257 aaPredicted RBP8.21□□□□□ -1.1
HDAC9-229ENST00000622668 DHRS4L2Q6PKH6 230 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 P2RY8Q86VZ1 359 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 DIRAS2Q96HU8 199 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 VSTM2LQ96N03 204 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 MRPL39Q9NYK5 338 aaKnown RBP8.21□□□□□ -1.1
HDAC9-229ENST00000622668 KCNS2Q9ULS6 477 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 RAB26Q9ULW5 256 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 TIMM10BQ9Y5J6 103 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 ZFYVE26Q68DK2 2539 aa8.21□□□□□ -1.1
HDAC9-229ENST00000622668 WDR1O75083 606 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 CYC1P08574 325 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 ARRB2P32121 409 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 ARR3P36575 388 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 ADH7P40394 386 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 GLP1RP43220 463 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 NR1H2P55055 460 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 GNG2P59768 71 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 TLE1Q04724 770 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 KIAA0040Q15053 153 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 PLGLAQ15195 96 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 OCLNQ16625 522 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 LTC4SQ16873 150 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 SPRED3Q2MJR0 410 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 CORO6Q6QEF8 472 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 ZNF227Q86WZ6 799 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 TUSC5Q8IXB3 177 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 SLC7A13Q8TCU3 470 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 COX4I2Q96KJ9 171 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 KCTD7Q96MP8 289 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 FOXB1Q99853 325 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 AMBRA1Q9C0C7 1298 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 WDR76Q9H967 626 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 SLC25A37Q9NYZ2 338 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 MYEF2Q9P2K5 600 aaKnown RBP8.2□□□□□ -1.1
HDAC9-229ENST00000622668 hCG_2014768A0A024R1R8 64 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 LRRTM2O43300 516 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 YES1P07947 543 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 GUSBP08236 651 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 NDUFB7P17568 137 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 CHRNB4P30926 498 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 EDDM3BP56851 147 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 RAC3P60763 192 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 TBR1Q16650 682 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 DPY19L2P2Q6ZN68 376 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 LINGO2Q7L985 606 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 CEACAM19Q7Z692 300 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 ZNF565Q8N9K5 539 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 OR1J1Q8NGS3 322 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 OR5AK2Q8NH90 309 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 ABHD3Q8WU67 409 aa8.2□□□□□ -1.1
HDAC9-229ENST00000622668 SMURF1Q9HCE7 757 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms