RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 PUDPQ08623 228 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 PMS2P3Q13401 168 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 CCNIQ14094 377 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 DAG1Q14118 895 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 SQLEQ14534 574 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 IQCCQ4KMZ1 466 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 C1QTNF12Q5T7M4 302 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 FAM166AQ6J272 317 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 LINC00114Q6XXX2 140 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 ZNF813Q6ZN06 617 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 DHDDSQ86SQ9 333 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 KRT73Q86Y46 540 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 PAQR4Q8N4S7 273 aaPredicted RBP9.85□□□□□ -0.83
CPNE3-210ENST00000621245 C10orf53Q8N6V4 93 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 HIPK4Q8NE63 616 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 VANGL1Q8TAA9 524 aaPredicted RBP9.85□□□□□ -0.83
CPNE3-210ENST00000621245 CKAP2Q8WWK9 683 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 TAMM41Q96BW9 452 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 C1orf159Q96HA4 380 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 SNX18Q96RF0 628 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 MCHR1Q99705 422 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 SYT3Q9BQG1 590 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 USP22Q9UPT9 525 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 TMA7Q9Y2S6 64 aaKnown RBP9.85□□□□□ -0.83
CPNE3-210ENST00000621245 ARHGAP32A7KAX9 2087 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 TANC2Q9HCD6 1990 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 NCR1O76036 304 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 TGFAP01135 160 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 ZNF35P13682 527 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 IFNGR1P15260 489 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 TCN1P20061 433 aaPredicted RBP9.84□□□□□ -0.83
CPNE3-210ENST00000621245 SLC6A2P23975 617 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 GIFP27352 417 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 ARR3P36575 388 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 GIPRP48546 466 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 PTDSS1P48651 473 aaKnown RBP9.84□□□□□ -0.83
CPNE3-210ENST00000621245 SEC24CP53992 1094 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 BIDP55957 195 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 HNRNPA0Q13151 305 aaKnown RBP9.84□□□□□ -0.83
CPNE3-210ENST00000621245 RIN1Q13671 783 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 GSG1Q2KHT4 349 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 CR1LQ2VPA4 569 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 ENTPD8Q5MY95 495 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 ELFN2Q5R3F8 820 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 C5orf46Q6UWT4 87 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 ZNF627Q7L945 461 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 SKA3Q8IX90 412 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 SCAIQ8N9R8 606 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 TMEM158Q8WZ71 300 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 ATP6V1G3Q96LB4 118 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 TMEM43Q9BTV4 400 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 SPATA5L1Q9BVQ7 753 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 ASPNQ9BXN1 380 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 ULBP2Q9BZM5 246 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 TMEM27Q9HBJ8 222 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 DYNLRB1Q9NP97 96 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 KCNS2Q9ULS6 477 aa9.84□□□□□ -0.83
CPNE3-210ENST00000621245 M0QX08 132 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 CH25HO95992 272 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 HPXP02790 462 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 TACSTD2P09758 323 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 ADORA3P0DMS8 318 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 CCL2P13500 99 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 SRD5A1P18405 259 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 NR4A1P22736 598 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 PPIBP23284 216 aaKnown RBP9.83□□□□□ -0.84
CPNE3-210ENST00000621245 AHCYP23526 432 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 CSNK1A1P48729 337 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 GZMMP51124 257 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 RUNX1T1Q06455 604 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 RAB39AQ14964 217 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 ZNF74Q16587 644 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 FXNQ16595 210 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 CYP51A1Q16850 503 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 ALKBH6Q3KRA9 238 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 NET1Q7Z628 596 aaPredicted RBP9.83□□□□□ -0.84
CPNE3-210ENST00000621245 OR6N1Q8NGY5 312 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 OR5J2Q8NH18 312 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 OR6S1Q8NH40 331 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 GTF3AQ92664 365 aaKnown RBP9.83□□□□□ -0.84
CPNE3-210ENST00000621245 TMEM54Q969K7 222 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 YIPF5Q969M3 257 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 MRPL24Q96A35 216 aaKnown RBP9.83□□□□□ -0.84
CPNE3-210ENST00000621245 LRR1Q96L50 414 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 ANKRD27Q96NW4 1050 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 TSPAN32Q96QS1 320 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 ZNF607Q96SK3 696 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 FOXB1Q99853 325 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 SH3GL3Q99963 347 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 PRSS27Q9BQR3 290 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 C19orf24Q9BVV8 132 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 RAB1BQ9H0U4 201 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 OR51B6Q9H340 312 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 TAS2R5Q9NYW4 299 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 LPAR3Q9UBY5 353 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 ANGPT4Q9Y264 503 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 POFUT2Q9Y2G5 429 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 CORINQ9Y5Q5 1042 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 NOX1Q9Y5S8 564 aa9.83□□□□□ -0.84
CPNE3-210ENST00000621245 PRORSD1PA6NEY8 169 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms