RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 CTXN1P60606 82 aa16.02■□□□□ 0.16
LITAF-220ENST00000620789 ARF1P84077 181 aaKnown RBP16.02■□□□□ 0.16
LITAF-220ENST00000620789 RUNX1T1Q06455 604 aa16.02■□□□□ 0.16
LITAF-220ENST00000620789 TBRG1Q3YBR2 411 aa16.02■□□□□ 0.16
LITAF-220ENST00000620789 ANKRD16Q6P6B7 361 aa16.02■□□□□ 0.16
LITAF-220ENST00000620789 ASRGL1Q7L266 308 aa16.02■□□□□ 0.16
LITAF-220ENST00000620789 OR4C15Q8NGM1 316 aa16.02■□□□□ 0.16
LITAF-220ENST00000620789 MAGEE2Q8TD90 523 aaPredicted RBP16.02■□□□□ 0.16
LITAF-220ENST00000620789 BCL2L2Q92843 193 aaPredicted RBP16.02■□□□□ 0.16
LITAF-220ENST00000620789 RSRC1Q96IZ7 334 aaKnown RBP16.02■□□□□ 0.16
LITAF-220ENST00000620789 HS3ST6Q96QI5 342 aa16.02■□□□□ 0.16
LITAF-220ENST00000620789 GPA33Q99795 319 aa16.02■□□□□ 0.16
LITAF-220ENST00000620789 MRPL13Q9BYD1 178 aaKnown RBP16.02■□□□□ 0.16
LITAF-220ENST00000620789 NDEL1Q9GZM8 345 aa16.02■□□□□ 0.16
LITAF-220ENST00000620789 NELFAQ9H3P2 528 aa16.02■□□□□ 0.16
LITAF-220ENST00000620789 ABCA4P78363 2273 aa16.02■□□□□ 0.15
LITAF-220ENST00000620789 PRR14LQ5THK1 2151 aa16.02■□□□□ 0.15
LITAF-220ENST00000620789 CSMD1Q96PZ7 3565 aa16.01■□□□□ 0.15
LITAF-220ENST00000620789 UNC119BA6NIH7 251 aa16.01■□□□□ 0.15
LITAF-220ENST00000620789 PTP4A3O75365 173 aa16.01■□□□□ 0.15
LITAF-220ENST00000620789 TRMUO75648 421 aaKnown RBP16.01■□□□□ 0.15
LITAF-220ENST00000620789 NDUFB2O95178 105 aa16.01■□□□□ 0.15
LITAF-220ENST00000620789 ACADSP16219 412 aa16.01■□□□□ 0.15
LITAF-220ENST00000620789 ZNF26P17031 533 aaPredicted RBP16.01■□□□□ 0.15
LITAF-220ENST00000620789 FPR3P25089 353 aa16.01■□□□□ 0.15
LITAF-220ENST00000620789 RPL4P36578 427 aaKnown RBP16.01■□□□□ 0.15
LITAF-220ENST00000620789 CLRN1P58418 232 aa16.01■□□□□ 0.15
LITAF-220ENST00000620789 RPL27P61353 136 aaKnown RBP16.01■□□□□ 0.15
LITAF-220ENST00000620789 TOP3AQ13472 1001 aaPredicted RBP16.01■□□□□ 0.15
LITAF-220ENST00000620789 HIST3H3Q16695 136 aa16.01■□□□□ 0.15
LITAF-220ENST00000620789 NCMAPQ5T1S8 102 aa16.01■□□□□ 0.15
LITAF-220ENST00000620789 C1orf94Q6P1W5 598 aa16.01■□□□□ 0.15
LITAF-220ENST00000620789 KLHL24Q6TFL4 600 aa16.01■□□□□ 0.15
LITAF-220ENST00000620789 LINC00471Q8N535 108 aa16.01■□□□□ 0.15
LITAF-220ENST00000620789 NOXO1Q8NFA2 376 aa16.01■□□□□ 0.15
LITAF-220ENST00000620789 TSPAN32Q96QS1 320 aa16.01■□□□□ 0.15
LITAF-220ENST00000620789 ESRP2Q9H6T0 727 aaKnown RBP16.01■□□□□ 0.15
LITAF-220ENST00000620789 REEP1Q9H902 201 aa16.01■□□□□ 0.15
LITAF-220ENST00000620789 OBP2BQ9NPH6 170 aa16.01■□□□□ 0.15
LITAF-220ENST00000620789 VNN3Q9NY84 501 aa16.01■□□□□ 0.15
LITAF-220ENST00000620789 NPAP1Q9NZP6 1156 aa16.01■□□□□ 0.15
LITAF-220ENST00000620789 ZNF346Q9UL40 294 aaKnown RBP16.01■□□□□ 0.15
LITAF-220ENST00000620789 MAGED1Q9Y5V3 778 aaPredicted RBP16.01■□□□□ 0.15
LITAF-220ENST00000620789 A0A096LPE4 126 aa16■□□□□ 0.15
LITAF-220ENST00000620789 ARPC4-TTLL3A0A0A6YYG9 625 aa16■□□□□ 0.15
LITAF-220ENST00000620789 A0A1W2PPZ6 126 aa16■□□□□ 0.15
LITAF-220ENST00000620789 WNT11O96014 354 aa16■□□□□ 0.15
LITAF-220ENST00000620789 CST1P01037 141 aa16■□□□□ 0.15
LITAF-220ENST00000620789 CD14P08571 375 aa16■□□□□ 0.15
LITAF-220ENST00000620789 HOXB1P14653 301 aaPredicted RBP16■□□□□ 0.15
LITAF-220ENST00000620789 ERFP50548 548 aa16■□□□□ 0.15
LITAF-220ENST00000620789 PPP1R8Q12972 351 aaKnown RBP16■□□□□ 0.15
LITAF-220ENST00000620789 FAM205BPQ63HN1 556 aa16■□□□□ 0.15
LITAF-220ENST00000620789 PGBD2Q6P3X8 592 aa16■□□□□ 0.15
LITAF-220ENST00000620789 LRFN4Q6PJG9 635 aa16■□□□□ 0.15
LITAF-220ENST00000620789 ZNF627Q7L945 461 aa16■□□□□ 0.15
LITAF-220ENST00000620789 KATNB1Q9BVA0 655 aa16■□□□□ 0.15
LITAF-220ENST00000620789 PLEKHF2Q9H8W4 249 aa16■□□□□ 0.15
LITAF-220ENST00000620789 POFUT2Q9Y2G5 429 aa16■□□□□ 0.15
LITAF-220ENST00000620789 SAMHD1Q9Y3Z3 626 aaKnown RBP16■□□□□ 0.15
LITAF-220ENST00000620789 U3KQV3 271 aa16■□□□□ 0.15
LITAF-220ENST00000620789 ANKRD17O75179 2603 aaKnown RBP15.99■□□□□ 0.15
LITAF-220ENST00000620789 DPRXA6NFQ7 191 aa15.99■□□□□ 0.15
LITAF-220ENST00000620789 SEC14L2O76054 403 aa15.99■□□□□ 0.15
LITAF-220ENST00000620789 CCNB2O95067 398 aa15.99■□□□□ 0.15
LITAF-220ENST00000620789 QDPRP09417 244 aa15.99■□□□□ 0.15
LITAF-220ENST00000620789 ACVR1BP36896 505 aa15.99■□□□□ 0.15
LITAF-220ENST00000620789 GSSP48637 474 aa15.99■□□□□ 0.15
LITAF-220ENST00000620789 ZNF83P51522 516 aa15.99■□□□□ 0.15
LITAF-220ENST00000620789 FXYD6P3P58550 94 aa15.99■□□□□ 0.15
LITAF-220ENST00000620789 UBE2NP61088 152 aaKnown RBP15.99■□□□□ 0.15
LITAF-220ENST00000620789 ERVK-25P63136 954 aa15.99■□□□□ 0.15
LITAF-220ENST00000620789 BSPH1Q075Z2 132 aa15.99■□□□□ 0.15
LITAF-220ENST00000620789 GK3PQ14409 553 aa15.99■□□□□ 0.15
LITAF-220ENST00000620789 C1orf146Q5VVC0 180 aa15.99■□□□□ 0.15
LITAF-220ENST00000620789 SMARCD3Q6STE5 483 aa15.99■□□□□ 0.15
LITAF-220ENST00000620789 KLHL17Q6TDP4 642 aa15.99■□□□□ 0.15
LITAF-220ENST00000620789 THSD4Q6ZMP0 1018 aa15.99■□□□□ 0.15
LITAF-220ENST00000620789 SYT14Q8NB59 555 aa15.99■□□□□ 0.15
LITAF-220ENST00000620789 PAPD5Q8NDF8 572 aaKnown RBP15.99■□□□□ 0.15
LITAF-220ENST00000620789 OR9Q2Q8NGE9 314 aa15.99■□□□□ 0.15
LITAF-220ENST00000620789 ZNF519Q8TB69 540 aa15.99■□□□□ 0.15
LITAF-220ENST00000620789 GNPDA2Q8TDQ7 276 aa15.99■□□□□ 0.15
LITAF-220ENST00000620789 NRGNQ92686 78 aa15.99■□□□□ 0.15
LITAF-220ENST00000620789 HDAC2Q92769 488 aaKnown RBP15.99■□□□□ 0.15
LITAF-220ENST00000620789 GPX7Q96SL4 187 aaPredicted RBP15.99■□□□□ 0.15
LITAF-220ENST00000620789 KCNK17Q96T54 332 aa15.99■□□□□ 0.15
LITAF-220ENST00000620789 FOXB1Q99853 325 aa15.99■□□□□ 0.15
LITAF-220ENST00000620789 TMEM204Q9BSN7 226 aa15.99■□□□□ 0.15
LITAF-220ENST00000620789 YY1AP1Q9H869 796 aa15.99■□□□□ 0.15
LITAF-220ENST00000620789 CCM2LQ9NUG4 571 aaPredicted RBP15.99■□□□□ 0.15
LITAF-220ENST00000620789 ADAM18Q9Y3Q7 739 aa15.99■□□□□ 0.15
LITAF-220ENST00000620789 A6NIZ1 184 aa15.98■□□□□ 0.15
LITAF-220ENST00000620789 DHHO43323 396 aa15.98■□□□□ 0.15
LITAF-220ENST00000620789 FKBP6O75344 327 aa15.98■□□□□ 0.15
LITAF-220ENST00000620789 CD3EP07766 207 aa15.98■□□□□ 0.15
LITAF-220ENST00000620789 NR2C1P13056 603 aa15.98■□□□□ 0.15
LITAF-220ENST00000620789 PAX7P23759 505 aa15.98■□□□□ 0.15
LITAF-220ENST00000620789 ZNF133P52736 654 aaPredicted RBP15.98■□□□□ 0.15
LITAF-220ENST00000620789 RAP1BP61224 184 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms