RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 CD14P08571 375 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 RAB40ALP0C0E4 278 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 HSF1Q00613 529 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 DYRK1AQ13627 763 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 BPIFB2Q8N4F0 458 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 RAB40AQ8WXH6 277 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 MALSU1Q96EH3 234 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 CENPOQ9BU64 300 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 PLA2G2FQ9BZM2 168 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 CRLF2Q9HC73 371 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 SEMA4GQ9NTN9 838 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 NDRG4Q9ULP0 352 aaKnown RBP10.45□□□□□ -0.74
CLIP1-219ENST00000620786 SELENOFO60613 162 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 CD22P20273 847 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 TEKQ02763 1124 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 CAMK2BQ13554 666 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 CRMP1Q14194 572 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 PDLIM3Q53GG5 364 aaPredicted RBP10.45□□□□□ -0.74
CLIP1-219ENST00000620786 RNLSQ5VYX0 342 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 NXNL2Q5VZ03 156 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 Q6ZSR9 355 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 SPARTQ8N0X7 666 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 KCNG3Q8TAE7 436 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 CDX2Q99626 313 aaPredicted RBP10.45□□□□□ -0.74
CLIP1-219ENST00000620786 MMP28Q9H239 520 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 PAQR5Q9NXK6 330 aaPredicted RBP10.45□□□□□ -0.74
CLIP1-219ENST00000620786 FBXO7Q9Y3I1 522 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 ARHGAP33O14559 1287 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 PRAF2O60831 178 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 CNIH1O95406 144 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 DAPP51397 102 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 EMP3P54852 163 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 HTD2P86397 168 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 AKR1C1Q04828 323 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 MEP1BQ16820 701 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 ARHGAP11BQ3KRB8 267 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 Q6ZTK2 550 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 SLC22A24Q8N4F4 322 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 UTP4Q969X6 686 aaKnown RBP10.45□□□□□ -0.74
CLIP1-219ENST00000620786 EMC6Q9BV81 110 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 NMNAT2Q9BZQ4 307 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 NOX3Q9HBY0 568 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 C19orf53Q9UNZ5 99 aaPredicted RBP10.45□□□□□ -0.74
CLIP1-219ENST00000620786 PCDHGA5Q9Y5G8 931 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 A0A1W2PR48 441 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 GABARAPH6UMI1 98 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 M0R082 166 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 TNFRSF10AO00220 468 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 MBTPS2O43462 519 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 GABARAPO95166 117 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 ARR3P36575 388 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 DUSP2Q05923 314 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 ALKBH1Q13686 389 aaKnown RBP10.45□□□□□ -0.74
CLIP1-219ENST00000620786 HACD4Q5VWC8 232 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 LRRC56Q8IYG6 542 aaPredicted RBP10.45□□□□□ -0.74
CLIP1-219ENST00000620786 DAZAP1Q96EP5 407 aaKnown RBP10.45□□□□□ -0.74
CLIP1-219ENST00000620786 BARHL1Q9BZE3 327 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 PPA2Q9H2U2 334 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 NRIP3Q9NQ35 241 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 A0A1W2PNR3 127 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 TCRBV5S1A1TA0A578 114 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 H7C1Q1 480 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 RAB27BO00194 218 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 KRBOX4Q5JUW0 171 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 SYT9Q86SS6 491 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 SLC15A4Q8N697 577 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 SEMA6DQ8NFY4 1073 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 FAM210AQ96ND0 272 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 CHST8Q9H2A9 424 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 MYH15Q9Y2K3 1946 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 HSD17B6O14756 317 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 CLDN15P56746 228 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 RPL11P62913 178 aaKnown RBP10.44□□□□□ -0.74
CLIP1-219ENST00000620786 DHRS13Q6UX07 377 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 Q7L0L9 218 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.44□□□□□ -0.74
CLIP1-219ENST00000620786 LRRC28Q86X40 367 aaPredicted RBP10.44□□□□□ -0.74
CLIP1-219ENST00000620786 BATF2Q8N1L9 274 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 OR6T1Q8NGN1 323 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 C3orf49Q96BT1 292 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 AMBRA1Q9C0C7 1298 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 WDR37Q9Y2I8 494 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 HS3ST1O14792 307 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 FPR3P25089 353 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 C21orf33P30042 268 aaPredicted RBP10.44□□□□□ -0.74
CLIP1-219ENST00000620786 CLDN12P56749 244 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 SELENBP1Q13228 472 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 RBMS3Q6XE24 437 aaKnown RBP10.44□□□□□ -0.74
CLIP1-219ENST00000620786 RNF170Q96K19 258 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 LYSMD1Q96S90 227 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 OR52A5Q9H2C5 316 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 TMEM38AQ9H6F2 299 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 EMC7Q9NPA0 242 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 UFSP2Q9NUQ7 469 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 PRELID3BQ9Y3B1 194 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 IGHV3-15A0A0B4J1V0 119 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 SLC22A20A6NK97 555 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 MT-CO3P00414 261 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 CEACAM5P06731 702 aa10.44□□□□□ -0.74
CLIP1-219ENST00000620786 QDPRP09417 244 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms