RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 ZNF524Q96C55 264 aa14.25□□□□□ -0.13
CD40-207ENST00000620709 OR5B2Q96R09 309 aa14.25□□□□□ -0.13
CD40-207ENST00000620709 SLC19A3Q9BZV2 496 aa14.25□□□□□ -0.13
CD40-207ENST00000620709 KLHL13Q9P2N7 655 aa14.25□□□□□ -0.13
CD40-207ENST00000620709 ROS1P08922 2347 aa14.25□□□□□ -0.13
CD40-207ENST00000620709 H7C1Q1 480 aa14.25□□□□□ -0.13
CD40-207ENST00000620709 NR1H2P55055 460 aa14.25□□□□□ -0.13
CD40-207ENST00000620709 BLMHQ13867 455 aa14.25□□□□□ -0.13
CD40-207ENST00000620709 MAD2L1BPQ15013 274 aaPredicted RBP14.25□□□□□ -0.13
CD40-207ENST00000620709 TMPRSS11FQ6ZWK6 438 aa14.25□□□□□ -0.13
CD40-207ENST00000620709 CLDN22Q8N7P3 220 aa14.25□□□□□ -0.13
CD40-207ENST00000620709 HDAC2Q92769 488 aaKnown RBP14.25□□□□□ -0.13
CD40-207ENST00000620709 BPIFA2Q96DR5 249 aa14.25□□□□□ -0.13
CD40-207ENST00000620709 MEPEQ9NQ76 525 aaPredicted RBP14.25□□□□□ -0.13
CD40-207ENST00000620709 C20orf141Q9NUB4 165 aa14.25□□□□□ -0.13
CD40-207ENST00000620709 IMPAD1Q9NX62 359 aa14.25□□□□□ -0.13
CD40-207ENST00000620709 HTR3EA5X5Y0 456 aa14.24□□□□□ -0.13
CD40-207ENST00000620709 UNC119BA6NIH7 251 aa14.24□□□□□ -0.13
CD40-207ENST00000620709 YES1P07947 543 aa14.24□□□□□ -0.13
CD40-207ENST00000620709 PSMB1P20618 241 aaKnown RBP14.24□□□□□ -0.13
CD40-207ENST00000620709 TOP3AQ13472 1001 aaPredicted RBP14.24□□□□□ -0.13
CD40-207ENST00000620709 RBM48Q5RL73 367 aaKnown RBP14.24□□□□□ -0.13
CD40-207ENST00000620709 C6orf141Q5SZD1 244 aa14.24□□□□□ -0.13
CD40-207ENST00000620709 SLX4IPQ5VYV7 408 aa14.24□□□□□ -0.13
CD40-207ENST00000620709 TFAP2EQ6VUC0 442 aa14.24□□□□□ -0.13
CD40-207ENST00000620709 ZNF620Q6ZNG0 422 aa14.24□□□□□ -0.13
CD40-207ENST00000620709 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.24□□□□□ -0.13
CD40-207ENST00000620709 ENTHD1Q8IYW4 607 aa14.24□□□□□ -0.13
CD40-207ENST00000620709 CIARTQ8N365 385 aaPredicted RBP14.24□□□□□ -0.13
CD40-207ENST00000620709 TMEM171Q8WVE6 324 aa14.24□□□□□ -0.13
CD40-207ENST00000620709 DNAJA3Q96EY1 480 aa14.24□□□□□ -0.13
CD40-207ENST00000620709 TMEM43Q9BTV4 400 aa14.24□□□□□ -0.13
CD40-207ENST00000620709 ADAM19Q9H013 955 aa14.24□□□□□ -0.13
CD40-207ENST00000620709 SERINC1Q9NRX5 453 aa14.24□□□□□ -0.13
CD40-207ENST00000620709 BLOC1S6Q9UL45 172 aa14.24□□□□□ -0.13
CD40-207ENST00000620709 CDH10Q9Y6N8 788 aa14.24□□□□□ -0.13
CD40-207ENST00000620709 TRIM64A6NGJ6 449 aa14.23□□□□□ -0.13
CD40-207ENST00000620709 TRIM64BA6NI03 449 aa14.23□□□□□ -0.13
CD40-207ENST00000620709 CDC42EP2O14613 210 aa14.23□□□□□ -0.13
CD40-207ENST00000620709 MPZL2O60487 215 aa14.23□□□□□ -0.13
CD40-207ENST00000620709 IGF2P01344 180 aa14.23□□□□□ -0.13
CD40-207ENST00000620709 IGFBP1P08833 259 aaPredicted RBP14.23□□□□□ -0.13
CD40-207ENST00000620709 SAGP10523 405 aaPredicted RBP14.23□□□□□ -0.13
CD40-207ENST00000620709 TFPIP10646 304 aa14.23□□□□□ -0.13
CD40-207ENST00000620709 MAKP20794 623 aa14.23□□□□□ -0.13
CD40-207ENST00000620709 TACR3P29371 465 aa14.23□□□□□ -0.13
CD40-207ENST00000620709 PTH2RP49190 550 aa14.23□□□□□ -0.13
CD40-207ENST00000620709 CDK5R2Q13319 367 aa14.23□□□□□ -0.13
CD40-207ENST00000620709 TMEM236Q5W0B7 351 aa14.23□□□□□ -0.13
CD40-207ENST00000620709 C12orf73Q69YU5 71 aa14.23□□□□□ -0.13
CD40-207ENST00000620709 RPL13AP3Q6NVV1 102 aa14.23□□□□□ -0.13
CD40-207ENST00000620709 C3orf33Q6P1S2 294 aa14.23□□□□□ -0.13
CD40-207ENST00000620709 SLC43A2Q8N370 569 aa14.23□□□□□ -0.13
CD40-207ENST00000620709 CNIH3Q8TBE1 160 aa14.23□□□□□ -0.13
CD40-207ENST00000620709 TMEM234Q8WY98 164 aa14.23□□□□□ -0.13
CD40-207ENST00000620709 ST8SIA1Q92185 356 aa14.23□□□□□ -0.13
CD40-207ENST00000620709 AKAP1Q92667 903 aaKnown RBP eCLIP14.23□□□□□ -0.13
CD40-207ENST00000620709 KISS1RQ969F8 398 aaPredicted RBP14.23□□□□□ -0.13
CD40-207ENST00000620709 HDHD5Q9BXW7 423 aa14.23□□□□□ -0.13
CD40-207ENST00000620709 EGLN3Q9H6Z9 239 aa14.23□□□□□ -0.13
CD40-207ENST00000620709 SLC25A19Q9HC21 320 aa14.23□□□□□ -0.13
CD40-207ENST00000620709 TBC1D23Q9NUY8 699 aa14.23□□□□□ -0.13
CD40-207ENST00000620709 KLHL9Q9P2J3 617 aa14.23□□□□□ -0.13
CD40-207ENST00000620709 PRR14LQ5THK1 2151 aa14.23□□□□□ -0.13
CD40-207ENST00000620709 EFCAB9A8MZ26 197 aa14.22□□□□□ -0.13
CD40-207ENST00000620709 LY6G6DO95868 133 aa14.22□□□□□ -0.13
CD40-207ENST00000620709 SMIM18P0DKX4 95 aa14.22□□□□□ -0.13
CD40-207ENST00000620709 HTR3AP46098 478 aa14.22□□□□□ -0.13
CD40-207ENST00000620709 POLR2HP52434 150 aaKnown RBP14.22□□□□□ -0.13
CD40-207ENST00000620709 RAC3P60763 192 aa14.22□□□□□ -0.13
CD40-207ENST00000620709 CDK5Q00535 292 aa14.22□□□□□ -0.13
CD40-207ENST00000620709 TEKQ02763 1124 aa14.22□□□□□ -0.13
CD40-207ENST00000620709 RASGEF1BQ0VAM2 473 aa14.22□□□□□ -0.13
CD40-207ENST00000620709 STK11Q15831 433 aa14.22□□□□□ -0.13
CD40-207ENST00000620709 KRTAP21-3Q3LHN1 58 aa14.22□□□□□ -0.13
CD40-207ENST00000620709 SLC25A53Q5H9E4 307 aa14.22□□□□□ -0.13
CD40-207ENST00000620709 SFRP5Q5T4F7 317 aa14.22□□□□□ -0.13
CD40-207ENST00000620709 SLC27A4Q6P1M0 643 aa14.22□□□□□ -0.13
CD40-207ENST00000620709 CASP12Q6UXS9 341 aa14.22□□□□□ -0.13
CD40-207ENST00000620709 GRINAQ7Z429 371 aa14.22□□□□□ -0.13
CD40-207ENST00000620709 GABRG1Q8N1C3 465 aa14.22□□□□□ -0.13
CD40-207ENST00000620709 FANK1Q8TC84 345 aa14.22□□□□□ -0.13
CD40-207ENST00000620709 ZNF566Q969W8 418 aa14.22□□□□□ -0.13
CD40-207ENST00000620709 SGTBQ96EQ0 304 aa14.22□□□□□ -0.13
CD40-207ENST00000620709 TEX12Q9BXU0 123 aa14.22□□□□□ -0.13
CD40-207ENST00000620709 PRRG3Q9BZD7 231 aa14.22□□□□□ -0.13
CD40-207ENST00000620709 PLA2G12AQ9BZM1 189 aa14.22□□□□□ -0.13
CD40-207ENST00000620709 IL20Q9NYY1 176 aa14.22□□□□□ -0.13
CD40-207ENST00000620709 PRSS50Q9UI38 385 aa14.22□□□□□ -0.13
CD40-207ENST00000620709 OSGIN1Q9UJX0 560 aa14.22□□□□□ -0.13
CD40-207ENST00000620709 RAI1Q7Z5J4 1906 aaPredicted RBP14.22□□□□□ -0.13
CD40-207ENST00000620709 IGKV1D-42A0A075B6H8 117 aa14.21□□□□□ -0.13
CD40-207ENST00000620709 SLC1A7O00341 560 aa14.21□□□□□ -0.13
CD40-207ENST00000620709 HS3ST1O14792 307 aa14.21□□□□□ -0.13
CD40-207ENST00000620709 CCDC159P0C7I6 412 aa14.21□□□□□ -0.13
CD40-207ENST00000620709 CXCR1P25024 350 aa14.21□□□□□ -0.13
CD40-207ENST00000620709 GIPRP48546 466 aa14.21□□□□□ -0.13
CD40-207ENST00000620709 CXCR4P61073 352 aa14.21□□□□□ -0.13
CD40-207ENST00000620709 GINS1Q14691 196 aa14.21□□□□□ -0.13
CD40-207ENST00000620709 FREM1Q5H8C1 2179 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms