RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 HIST3H2AQ7L7L0 130 aa14.85□□□□□ -0.03
HMGN3-203ENST00000620514 NANOGNBQ7Z5D8 188 aa14.85□□□□□ -0.03
HMGN3-203ENST00000620514 OR2T12Q8NG77 320 aa14.85□□□□□ -0.03
HMGN3-203ENST00000620514 FGFBP3Q8TAT2 258 aa14.85□□□□□ -0.03
HMGN3-203ENST00000620514 HIST1H2ACQ93077 130 aa14.85□□□□□ -0.03
HMGN3-203ENST00000620514 TNFRSF13CQ96RJ3 184 aa14.85□□□□□ -0.03
HMGN3-203ENST00000620514 ZNF442Q9H7R0 627 aa14.85□□□□□ -0.03
HMGN3-203ENST00000620514 C20orf141Q9NUB4 165 aa14.85□□□□□ -0.03
HMGN3-203ENST00000620514 CMTM6Q9NX76 183 aa14.85□□□□□ -0.03
HMGN3-203ENST00000620514 GLTPQ9NZD2 209 aa14.85□□□□□ -0.03
HMGN3-203ENST00000620514 RIMS3Q9UJD0 308 aa14.85□□□□□ -0.03
HMGN3-203ENST00000620514 TMEM129A0AVI4 362 aa14.84□□□□□ -0.03
HMGN3-203ENST00000620514 BLOC1S5-TXNDC5H3BN57 136 aa14.84□□□□□ -0.03
HMGN3-203ENST00000620514 hCG_2039718K7EN88 272 aa14.84□□□□□ -0.03
HMGN3-203ENST00000620514 TLX2O43763 284 aaPredicted RBP14.84□□□□□ -0.03
HMGN3-203ENST00000620514 OR5F1O95221 314 aa14.84□□□□□ -0.03
HMGN3-203ENST00000620514 MT-ND1P03886 318 aa14.84□□□□□ -0.03
HMGN3-203ENST00000620514 PATE4P0C8F1 98 aa14.84□□□□□ -0.03
HMGN3-203ENST00000620514 ZNF14P17017 642 aaPredicted RBP14.84□□□□□ -0.03
HMGN3-203ENST00000620514 NPR2P20594 1047 aa14.84□□□□□ -0.03
HMGN3-203ENST00000620514 PTDSS1P48651 473 aaKnown RBP14.84□□□□□ -0.03
HMGN3-203ENST00000620514 RUNX1T1Q06455 604 aa14.84□□□□□ -0.03
HMGN3-203ENST00000620514 LOXL1Q08397 574 aaPredicted RBP14.84□□□□□ -0.03
HMGN3-203ENST00000620514 SNTB2Q13425 540 aaKnown RBP14.84□□□□□ -0.03
HMGN3-203ENST00000620514 DAG1Q14118 895 aa14.84□□□□□ -0.03
HMGN3-203ENST00000620514 MSMPQ1L6U9 139 aa14.84□□□□□ -0.03
HMGN3-203ENST00000620514 SPATA21Q7Z572 469 aa14.84□□□□□ -0.03
HMGN3-203ENST00000620514 SKA3Q8IX90 412 aa14.84□□□□□ -0.03
HMGN3-203ENST00000620514 MICU2Q8IYU8 434 aa14.84□□□□□ -0.03
HMGN3-203ENST00000620514 SVOPLQ8N434 492 aa14.84□□□□□ -0.03
HMGN3-203ENST00000620514 ZNF566Q969W8 418 aa14.84□□□□□ -0.03
HMGN3-203ENST00000620514 SLC25A44Q96H78 314 aaPredicted RBP14.84□□□□□ -0.03
HMGN3-203ENST00000620514 FKBP7Q9Y680 259 aa14.84□□□□□ -0.03
HMGN3-203ENST00000620514 CHD3Q12873 2000 aaKnown RBP14.83□□□□□ -0.03
HMGN3-203ENST00000620514 PIP5K1CO60331 668 aa14.83□□□□□ -0.04
HMGN3-203ENST00000620514 OR7A10O76100 309 aa14.83□□□□□ -0.04
HMGN3-203ENST00000620514 BCL10O95999 233 aa14.83□□□□□ -0.04
HMGN3-203ENST00000620514 IFNA14P01570 189 aa14.83□□□□□ -0.04
HMGN3-203ENST00000620514 F13BP05160 661 aa14.83□□□□□ -0.04
HMGN3-203ENST00000620514 CSF3P09919 207 aa14.83□□□□□ -0.04
HMGN3-203ENST00000620514 PGA4P0DJD7 388 aa14.83□□□□□ -0.04
HMGN3-203ENST00000620514 PGA3P0DJD8 388 aa14.83□□□□□ -0.04
HMGN3-203ENST00000620514 FUT1P19526 365 aa14.83□□□□□ -0.04
HMGN3-203ENST00000620514 FUT4P22083 530 aa14.83□□□□□ -0.04
HMGN3-203ENST00000620514 MDH1P40925 334 aaKnown RBP14.83□□□□□ -0.04
HMGN3-203ENST00000620514 RBM34P42696 430 aaKnown RBP14.83□□□□□ -0.04
HMGN3-203ENST00000620514 GIPRP48546 466 aa14.83□□□□□ -0.04
HMGN3-203ENST00000620514 PDLIM4P50479 330 aa14.83□□□□□ -0.04
HMGN3-203ENST00000620514 RAB1AP62820 205 aa14.83□□□□□ -0.04
HMGN3-203ENST00000620514 RPL18Q07020 188 aaKnown RBP14.83□□□□□ -0.04
HMGN3-203ENST00000620514 CARTPTQ16568 116 aa14.83□□□□□ -0.04
HMGN3-203ENST00000620514 HSP90B2PQ58FF3 399 aa14.83□□□□□ -0.04
HMGN3-203ENST00000620514 ZCCHC24Q8N2G6 241 aaKnown RBP14.83□□□□□ -0.04
HMGN3-203ENST00000620514 IL17RDQ8NFM7 739 aa14.83□□□□□ -0.04
HMGN3-203ENST00000620514 TMEM239Q8WW34 195 aa14.83□□□□□ -0.04
HMGN3-203ENST00000620514 SGTBQ96EQ0 304 aa14.83□□□□□ -0.04
HMGN3-203ENST00000620514 TPD52L3Q96J77 140 aa14.83□□□□□ -0.04
HMGN3-203ENST00000620514 DOK1Q99704 481 aa14.83□□□□□ -0.04
HMGN3-203ENST00000620514 DNHD1Q96M86 4753 aa14.82□□□□□ -0.04
HMGN3-203ENST00000620514 ELOVL7A1L3X0 281 aa14.82□□□□□ -0.04
HMGN3-203ENST00000620514 SH3PXD2BA1X283 911 aa14.82□□□□□ -0.04
HMGN3-203ENST00000620514 VWC2LB2RUY7 222 aa14.82□□□□□ -0.04
HMGN3-203ENST00000620514 SLC22A2O15244 555 aa14.82□□□□□ -0.04
HMGN3-203ENST00000620514 DHHO43323 396 aa14.82□□□□□ -0.04
HMGN3-203ENST00000620514 IGFBP1P08833 259 aaPredicted RBP14.82□□□□□ -0.04
HMGN3-203ENST00000620514 QDPRP09417 244 aa14.82□□□□□ -0.04
HMGN3-203ENST00000620514 ZNF35P13682 527 aa14.82□□□□□ -0.04
HMGN3-203ENST00000620514 NR4A1P22736 598 aa14.82□□□□□ -0.04
HMGN3-203ENST00000620514 AQP2P41181 271 aa14.82□□□□□ -0.04
HMGN3-203ENST00000620514 PPOXP50336 477 aa14.82□□□□□ -0.04
HMGN3-203ENST00000620514 LSM11P83369 360 aaKnown RBP eCLIP14.82□□□□□ -0.042e-7■■□□□ 11.8
HMGN3-203ENST00000620514 MYBPC1Q00872 1141 aa14.82□□□□□ -0.04
HMGN3-203ENST00000620514 RAB39AQ14964 217 aa14.82□□□□□ -0.04
HMGN3-203ENST00000620514 SLC15A3Q8IY34 581 aa14.82□□□□□ -0.04
HMGN3-203ENST00000620514 CDK20Q8IZL9 346 aa14.82□□□□□ -0.04
HMGN3-203ENST00000620514 MOSPD2Q8NHP6 518 aa14.82□□□□□ -0.04
HMGN3-203ENST00000620514 RP9Q8TA86 221 aaKnown RBP14.82□□□□□ -0.04
HMGN3-203ENST00000620514 FOXN4Q96NZ1 517 aa14.82□□□□□ -0.04
HMGN3-203ENST00000620514 ZNF347Q96SE7 839 aa14.82□□□□□ -0.04
HMGN3-203ENST00000620514 SH3GL3Q99963 347 aa14.82□□□□□ -0.04
HMGN3-203ENST00000620514 POLR2J2Q9GZM3 115 aaKnown RBP14.82□□□□□ -0.04
HMGN3-203ENST00000620514 POLR2J3Q9H1A7 115 aaKnown RBP14.82□□□□□ -0.04
HMGN3-203ENST00000620514 TMEM38BQ9NVV0 291 aa14.82□□□□□ -0.04
HMGN3-203ENST00000620514 A8MV72 311 aaPredicted RBP14.81□□□□□ -0.04
HMGN3-203ENST00000620514 UBL3O95164 117 aa14.81□□□□□ -0.04
HMGN3-203ENST00000620514 RAB36O95755 333 aa14.81□□□□□ -0.04
HMGN3-203ENST00000620514 COX4I1P13073 169 aa14.81□□□□□ -0.04
HMGN3-203ENST00000620514 USF1P22415 310 aaPredicted RBP14.81□□□□□ -0.04
HMGN3-203ENST00000620514 YAP1P46937 504 aaKnown RBP14.81□□□□□ -0.04
HMGN3-203ENST00000620514 VLDLRP98155 873 aa14.81□□□□□ -0.04
HMGN3-203ENST00000620514 GGTLC2Q14390 218 aa14.81□□□□□ -0.04
HMGN3-203ENST00000620514 C6orf52Q5T4I8 152 aa14.81□□□□□ -0.04
HMGN3-203ENST00000620514 PIWIL3Q7Z3Z3 882 aaKnown RBP14.81□□□□□ -0.04
HMGN3-203ENST00000620514 VTCN1Q7Z7D3 282 aa14.81□□□□□ -0.04
HMGN3-203ENST00000620514 TREML1Q86YW5 311 aa14.81□□□□□ -0.04
HMGN3-203ENST00000620514 SLC22A24Q8N4F4 322 aa14.81□□□□□ -0.04
HMGN3-203ENST00000620514 ASB10Q8WXI3 467 aa14.81□□□□□ -0.04
HMGN3-203ENST00000620514 MED4Q9NPJ6 270 aa14.81□□□□□ -0.04
HMGN3-203ENST00000620514 INIPQ9NRY2 104 aa14.81□□□□□ -0.04
HMGN3-203ENST00000620514 A4GNTQ9UNA3 340 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms