RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 CD3EP07766 207 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 ACADSP16219 412 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 CSNK1A1P48729 337 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 DAP3P51398 398 aaKnown RBP7.2□□□□□ -1.26
NEK3-209ENST00000618856 SMIM11AP58511 58 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 PRPS1P60891 318 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 CAMK2DQ13557 499 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 CEACAM16Q2WEN9 425 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 ZNF672Q499Z4 452 aaPredicted RBP7.2□□□□□ -1.26
NEK3-209ENST00000618856 DNAL1Q4LDG9 190 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 ALG10Q5BKT4 473 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 C10orf128Q5T292 105 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 C9orf135Q5VTT2 229 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 ZNF770Q6IQ21 691 aaPredicted RBP7.2□□□□□ -1.26
NEK3-209ENST00000618856 HMBOX1Q6NT76 420 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 C1orf94Q6P1W5 598 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 TMEM108Q6UXF1 575 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 CYP2R1Q6VVX0 501 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 ZNF730Q6ZMV8 503 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 FAM122BQ7Z309 247 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 ZER1Q7Z7L7 766 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 DHFR2Q86XF0 187 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 KRTAP1-3Q8IUG1 177 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 GPR137CQ8N3F9 429 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 OR4K5Q8NGD3 323 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 OR4C15Q8NGM1 316 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 OR52N5Q8NH56 324 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 ZNF519Q8TB69 540 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 ZNF566Q969W8 418 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 CLPTM1LQ96KA5 538 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 TNFRSF13CQ96RJ3 184 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 KCNK17Q96T54 332 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 BTBD10Q9BSF8 475 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 TRIM15Q9C019 465 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 NRIP3Q9NQ35 241 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 INIPQ9NRY2 104 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 CCM2LQ9NUG4 571 aaPredicted RBP7.2□□□□□ -1.26
NEK3-209ENST00000618856 ZNF701Q9NV72 531 aaPredicted RBP7.2□□□□□ -1.26
NEK3-209ENST00000618856 BEX4Q9NWD9 120 aaPredicted RBP7.2□□□□□ -1.26
NEK3-209ENST00000618856 MGAT4BQ9UQ53 548 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 SIGLEC7Q9Y286 467 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 FAM32AQ9Y421 112 aaKnown RBP7.2□□□□□ -1.26
NEK3-209ENST00000618856 UGT2A1Q9Y4X1 527 aa7.2□□□□□ -1.26
NEK3-209ENST00000618856 PRRC2AP48634 2157 aaKnown RBP7.2□□□□□ -1.26
NEK3-209ENST00000618856 ROS1P08922 2347 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 CADP27708 2225 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 TRAV27A0A087WT01 109 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 IGHV1-18A0A0C4DH31 117 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 A0A1W2PR80 420 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 A0A1W2PRG6 482 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 AQP12BA6NM10 295 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 M0R3G1 203 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 ABCD4O14678 606 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 GSC2O15499 205 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 AHCYL1O43865 530 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 MGRN1O60291 552 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 TRMUO75648 421 aaKnown RBP7.19□□□□□ -1.26
NEK3-209ENST00000618856 KRT33AO76009 404 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 KRT36O76013 467 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 PDE5AO76074 875 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 TXNDC12O95881 172 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 BCL10O95999 233 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 WNT11O96014 354 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 IGHG1P01857 330 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 UMPSP11172 480 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 CBR1P16152 277 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 HOXB6P17509 224 aaKnown RBP7.19□□□□□ -1.26
NEK3-209ENST00000618856 DNASE1P24855 282 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 HOXC12P31275 282 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 RPL27P61353 136 aaKnown RBP7.19□□□□□ -1.26
NEK3-209ENST00000618856 IL1RL1Q01638 556 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 MELKQ14680 651 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 DEFB113Q30KQ7 82 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 PGGHGQ32M88 737 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 ZBED5Q49AG3 693 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 FBXW10Q5XX13 1052 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 FAM205BPQ63HN1 556 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 KLHL17Q6TDP4 642 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 FOXL2NBQ6ZUU3 175 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 HDDC2Q7Z4H3 204 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 OAFQ86UD1 273 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 DTX2Q86UW9 622 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 MEX3DQ86XN8 651 aaKnown RBP7.19□□□□□ -1.26
NEK3-209ENST00000618856 ZDHHC21Q8IVQ6 265 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 AQP12AQ8IXF9 295 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 ADGRG5Q8IZF4 528 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 CDK20Q8IZL9 346 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 LRRC75A-AS1Q8N1F1 130 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 NOXO1Q8NFA2 376 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 KBTBD8Q8NFY9 601 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 OR13C2Q8NGS9 318 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 OR51A7Q8NH64 312 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 AKAP1Q92667 903 aaKnown RBP eCLIP7.19□□□□□ -1.26
NEK3-209ENST00000618856 HDAC2Q92769 488 aaKnown RBP7.19□□□□□ -1.26
NEK3-209ENST00000618856 PIGTQ969N2 578 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 MCHR2Q969V1 340 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 TSPAN32Q96QS1 320 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 THTPAQ9BU02 230 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 ALG12Q9BV10 488 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 KATNB1Q9BVA0 655 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms