RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 B4GALT1P15291 398 aa13.94□□□□□ -0.18
BRCA1-228ENST00000618469 AQP2P41181 271 aa13.94□□□□□ -0.18
BRCA1-228ENST00000618469 CAPZA2P47755 286 aa13.94□□□□□ -0.18
BRCA1-228ENST00000618469 KRT72Q14CN4 511 aa13.94□□□□□ -0.18
BRCA1-228ENST00000618469 PGGHGQ32M88 737 aa13.94□□□□□ -0.18
BRCA1-228ENST00000618469 MEX3DQ86XN8 651 aaKnown RBP13.94□□□□□ -0.18
BRCA1-228ENST00000618469 DEPDC4Q8N2C3 294 aa13.94□□□□□ -0.18
BRCA1-228ENST00000618469 OR6X1Q8NH79 312 aa13.94□□□□□ -0.18
BRCA1-228ENST00000618469 MOSPD2Q8NHP6 518 aa13.94□□□□□ -0.18
BRCA1-228ENST00000618469 ZNF566Q969W8 418 aa13.94□□□□□ -0.18
BRCA1-228ENST00000618469 BPIFA2Q96DR5 249 aa13.94□□□□□ -0.18
BRCA1-228ENST00000618469 SLC38A2Q96QD8 506 aa13.94□□□□□ -0.18
BRCA1-228ENST00000618469 CDRT15Q96T59 188 aa13.94□□□□□ -0.18
BRCA1-228ENST00000618469 KCNS3Q9BQ31 491 aa13.94□□□□□ -0.18
BRCA1-228ENST00000618469 GSX2Q9BZM3 304 aa13.94□□□□□ -0.18
BRCA1-228ENST00000618469 INIPQ9NRY2 104 aa13.94□□□□□ -0.18
BRCA1-228ENST00000618469 DCAF13Q9NV06 445 aaKnown RBP13.94□□□□□ -0.18
BRCA1-228ENST00000618469 FAIMQ9NVQ4 179 aa13.94□□□□□ -0.18
BRCA1-228ENST00000618469 POFUT2Q9Y2G5 429 aa13.94□□□□□ -0.18
BRCA1-228ENST00000618469 ENPP4Q9Y6X5 453 aa13.94□□□□□ -0.18
BRCA1-228ENST00000618469 ZNF503-AS2A6NEH8 195 aa13.93□□□□□ -0.18
BRCA1-228ENST00000618469 hCG_2039718K7EN88 272 aa13.93□□□□□ -0.18
BRCA1-228ENST00000618469 ARPC2O15144 300 aa13.93□□□□□ -0.18
BRCA1-228ENST00000618469 TMCC2O75069 709 aa13.93□□□□□ -0.18
BRCA1-228ENST00000618469 BCL10O95999 233 aa13.93□□□□□ -0.18
BRCA1-228ENST00000618469 PGA4P0DJD7 388 aa13.93□□□□□ -0.18
BRCA1-228ENST00000618469 PGA3P0DJD8 388 aa13.93□□□□□ -0.18
BRCA1-228ENST00000618469 MSX2P35548 267 aaPredicted RBP13.93□□□□□ -0.18
BRCA1-228ENST00000618469 CDKN1AP38936 164 aa13.93□□□□□ -0.18
BRCA1-228ENST00000618469 FXNQ16595 210 aa13.93□□□□□ -0.18
BRCA1-228ENST00000618469 ZNF730Q6ZMV8 503 aa13.93□□□□□ -0.18
BRCA1-228ENST00000618469 ZNF813Q6ZN06 617 aa13.93□□□□□ -0.18
BRCA1-228ENST00000618469 NOXO1Q8NFA2 376 aa13.93□□□□□ -0.18
BRCA1-228ENST00000618469 LIPHQ8WWY8 451 aa13.93□□□□□ -0.18
BRCA1-228ENST00000618469 ACOT11Q8WXI4 607 aaPredicted RBP13.93□□□□□ -0.18
BRCA1-228ENST00000618469 GTPBP3Q969Y2 492 aaKnown RBP13.93□□□□□ -0.18
BRCA1-228ENST00000618469 SLC25A44Q96H78 314 aaPredicted RBP13.93□□□□□ -0.18
BRCA1-228ENST00000618469 FOXB1Q99853 325 aa13.93□□□□□ -0.18
BRCA1-228ENST00000618469 GLTPQ9NZD2 209 aa13.93□□□□□ -0.18
BRCA1-228ENST00000618469 MOKQ9UQ07 419 aa13.93□□□□□ -0.18
BRCA1-228ENST00000618469 ATP23Q9Y6H3 246 aa13.93□□□□□ -0.18
BRCA1-228ENST00000618469 CHD3Q12873 2000 aaKnown RBP13.92□□□□□ -0.18
BRCA1-228ENST00000618469 E7EQL1 145 aa13.92□□□□□ -0.18
BRCA1-228ENST00000618469 IGHG1P01857 330 aa13.92□□□□□ -0.18
BRCA1-228ENST00000618469 CECR9P0C854 216 aa13.92□□□□□ -0.18
BRCA1-228ENST00000618469 HOXB1P14653 301 aaPredicted RBP13.92□□□□□ -0.18
BRCA1-228ENST00000618469 MAKP20794 623 aa13.92□□□□□ -0.18
BRCA1-228ENST00000618469 GPR4P46093 362 aa13.92□□□□□ -0.18
BRCA1-228ENST00000618469 DAP3P51398 398 aaKnown RBP13.92□□□□□ -0.18
BRCA1-228ENST00000618469 IDH3GP51553 393 aaPredicted RBP13.92□□□□□ -0.18
BRCA1-228ENST00000618469 MNAT1P51948 309 aa13.92□□□□□ -0.18
BRCA1-228ENST00000618469 ATP5J2P56134 94 aa13.92□□□□□ -0.18
BRCA1-228ENST00000618469 CLRN1P58418 232 aa13.92□□□□□ -0.18
BRCA1-228ENST00000618469 VLDLRP98155 873 aa13.92□□□□□ -0.18
BRCA1-228ENST00000618469 NPRL3Q12980 569 aa13.92□□□□□ -0.18
BRCA1-228ENST00000618469 TOP3AQ13472 1001 aaPredicted RBP13.92□□□□□ -0.18
BRCA1-228ENST00000618469 FGD3Q5JSP0 725 aa13.92□□□□□ -0.18
BRCA1-228ENST00000618469 HDDC2Q7Z4H3 204 aa13.92□□□□□ -0.18
BRCA1-228ENST00000618469 TSEN54Q7Z6J9 526 aaKnown RBP13.92□□□□□ -0.18
BRCA1-228ENST00000618469 YTHDF3Q7Z739 585 aaKnown RBP13.92□□□□□ -0.18
BRCA1-228ENST00000618469 MDP1Q86V88 176 aa13.92□□□□□ -0.18
BRCA1-228ENST00000618469 ASB10Q8WXI3 467 aa13.92□□□□□ -0.18
BRCA1-228ENST00000618469 TMEM54Q969K7 222 aa13.92□□□□□ -0.18
BRCA1-228ENST00000618469 NSMCE2Q96MF7 247 aa13.92□□□□□ -0.18
BRCA1-228ENST00000618469 DHRS9Q9BPW9 319 aa13.92□□□□□ -0.18
BRCA1-228ENST00000618469 TRAF4Q9BUZ4 470 aaPredicted RBP13.92□□□□□ -0.18
BRCA1-228ENST00000618469 GORASP2Q9H8Y8 452 aa13.92□□□□□ -0.18
BRCA1-228ENST00000618469 SEC61A2Q9H9S3 476 aa13.92□□□□□ -0.18
BRCA1-228ENST00000618469 MOV10Q9HCE1 1003 aaKnown RBP13.92□□□□□ -0.18
BRCA1-228ENST00000618469 ZNF701Q9NV72 531 aaPredicted RBP13.92□□□□□ -0.18
BRCA1-228ENST00000618469 NDUFAF4Q9P032 175 aa13.92□□□□□ -0.18
BRCA1-228ENST00000618469 CD300AQ9UGN4 299 aa13.92□□□□□ -0.18
BRCA1-228ENST00000618469 HIF3AQ9Y2N7 669 aa13.92□□□□□ -0.18
BRCA1-228ENST00000618469 FAM32AQ9Y421 112 aaKnown RBP13.92□□□□□ -0.18
BRCA1-228ENST00000618469 TRAV27A0A087WT01 109 aa13.91□□□□□ -0.18
BRCA1-228ENST00000618469 A0A087WUU8 490 aa13.91□□□□□ -0.18
BRCA1-228ENST00000618469 HTR3EA5X5Y0 456 aa13.91□□□□□ -0.18
BRCA1-228ENST00000618469 EFCAB9A8MZ26 197 aa13.91□□□□□ -0.18
BRCA1-228ENST00000618469 B2RBV5 119 aa13.91□□□□□ -0.18
BRCA1-228ENST00000618469 DIRAS1O95057 198 aa13.91□□□□□ -0.18
BRCA1-228ENST00000618469 HLA-HP01893 362 aa13.91□□□□□ -0.18
BRCA1-228ENST00000618469 H1F0P07305 194 aaKnown RBP13.91□□□□□ -0.18
BRCA1-228ENST00000618469 CELA3BP08861 270 aa13.91□□□□□ -0.18
BRCA1-228ENST00000618469 PAX1P15863 534 aa13.91□□□□□ -0.18
BRCA1-228ENST00000618469 PAX7P23759 505 aa13.91□□□□□ -0.18
BRCA1-228ENST00000618469 PRKCDQ05655 676 aa13.91□□□□□ -0.18
BRCA1-228ENST00000618469 RUNX1T1Q06455 604 aa13.91□□□□□ -0.18
BRCA1-228ENST00000618469 ALG10Q5BKT4 473 aa13.91□□□□□ -0.18
BRCA1-228ENST00000618469 TBPL2Q6SJ96 375 aa13.91□□□□□ -0.18
BRCA1-228ENST00000618469 MBOAT2Q6ZWT7 520 aa13.91□□□□□ -0.18
BRCA1-228ENST00000618469 DTX2Q86UW9 622 aa13.91□□□□□ -0.18
BRCA1-228ENST00000618469 MYPOPQ86VE0 399 aaPredicted RBP13.91□□□□□ -0.18
BRCA1-228ENST00000618469 OR13C2Q8NGS9 318 aa13.91□□□□□ -0.18
BRCA1-228ENST00000618469 KATNB1Q9BVA0 655 aa13.91□□□□□ -0.18
BRCA1-228ENST00000618469 ANKRD19PQ9H560 264 aa13.91□□□□□ -0.18
BRCA1-228ENST00000618469 NMNAT1Q9HAN9 279 aaPredicted RBP13.91□□□□□ -0.18
BRCA1-228ENST00000618469 FAM53CQ9NYF3 392 aa13.91□□□□□ -0.18
BRCA1-228ENST00000618469 CRNNQ9UBG3 495 aaPredicted RBP13.91□□□□□ -0.18
BRCA1-228ENST00000618469 PLCE1Q9P212 2302 aa13.91□□□□□ -0.18
BRCA1-228ENST00000618469 ATRQ13535 2644 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms