RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 OR6C68A6NDL8 312 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 MBD3L4A6NDZ8 208 aaPredicted RBP6.64□□□□□ -1.35
VPS45-213ENST00000618148 MBD3L3A6NE82 208 aaPredicted RBP6.64□□□□□ -1.35
VPS45-213ENST00000618148 MBD3L5A6NJ08 208 aaPredicted RBP6.64□□□□□ -1.35
VPS45-213ENST00000618148 SLC22A20A6NK97 555 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 M0R3G1 203 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 ATXN7O15265 892 aaPredicted RBP6.64□□□□□ -1.35
VPS45-213ENST00000618148 PRODHO43272 600 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 TLX2O43763 284 aaPredicted RBP6.64□□□□□ -1.35
VPS45-213ENST00000618148 TGM6O95932 706 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 BCL10O95999 233 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 PLGP00747 810 aaPredicted RBP6.64□□□□□ -1.35
VPS45-213ENST00000618148 PGA4P0DJD7 388 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 PGA3P0DJD8 388 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 GABRA1P14867 456 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 SLC15A1P46059 708 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 CSNK2BP67870 215 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 RUNX1T1Q06455 604 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 RASGEF1BQ0VAM2 473 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 TMED1Q13445 227 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 SF3B4Q15427 424 aaKnown RBP eCLIP6.64□□□□□ -1.35
VPS45-213ENST00000618148 LINC01559Q495D7 138 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 KRT80Q6KB66 452 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 NIPAL3Q6P499 406 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 GPAT4Q86UL3 456 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 ZBTB46Q86UZ6 589 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 GID4Q8IVV7 300 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 ZNF511Q8NB15 262 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 OR52E2Q8NGJ4 325 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 OR4K13Q8NH42 304 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 MBD3L2Q8NHZ7 208 aaPredicted RBP6.64□□□□□ -1.35
VPS45-213ENST00000618148 CNIH3Q8TBE1 160 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 FNDC8Q8TC99 324 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 KISS1RQ969F8 398 aaPredicted RBP6.64□□□□□ -1.35
VPS45-213ENST00000618148 SLC25A44Q96H78 314 aaPredicted RBP6.64□□□□□ -1.35
VPS45-213ENST00000618148 TXNDC15Q96J42 360 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 PLEKHA8Q96JA3 519 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 Q96MT0 163 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 ZNF582Q96NG8 517 aaPredicted RBP6.64□□□□□ -1.35
VPS45-213ENST00000618148 ZNF385AQ96PM9 386 aaKnown RBP6.64□□□□□ -1.35
VPS45-213ENST00000618148 OR2M2Q96R28 347 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 SIGLEC11Q96RL6 698 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 NMNAT3Q96T66 252 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 HCAR1Q9BXC0 346 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 GLRX2Q9NS18 164 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 RASSF1Q9NS23 344 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 MRPS18AQ9NVS2 196 aaKnown RBP6.64□□□□□ -1.35
VPS45-213ENST00000618148 FKBP14Q9NWM8 211 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 MED29Q9NX70 200 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 EMC3Q9P0I2 261 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 FOXD3Q9UJU5 478 aaPredicted RBP6.64□□□□□ -1.35
VPS45-213ENST00000618148 GPR52Q9Y2T5 361 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 GTF3C1Q12789 2109 aa6.64□□□□□ -1.35
VPS45-213ENST00000618148 KMT2BQ9UMN6 2715 aaPredicted RBP6.64□□□□□ -1.35
VPS45-213ENST00000618148 SLC22A23A1A5C7 686 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 SLC35F4A4IF30 521 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 CCDC182A6NF36 153 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 FIGNL2A6NMB9 653 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 POM121CA8CG34 1229 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 SLC1A7O00341 560 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 XKRYO14609 159 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 AKAP8O43823 692 aaKnown RBP6.63□□□□□ -1.35
VPS45-213ENST00000618148 SS18L1O75177 396 aaPredicted RBP6.63□□□□□ -1.35
VPS45-213ENST00000618148 ENTPD6O75354 484 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 TRMUO75648 421 aaKnown RBP6.63□□□□□ -1.35
VPS45-213ENST00000618148 IGHG1P01857 330 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 PIPP12273 146 aaPredicted RBP6.63□□□□□ -1.35
VPS45-213ENST00000618148 PAICSP22234 425 aaKnown RBP6.63□□□□□ -1.35
VPS45-213ENST00000618148 CRHBPP24387 322 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 ACVR2AP27037 513 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 HTR1FP30939 366 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 NTF4P34130 210 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 ACVR1BP36896 505 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 CHN2P52757 468 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 MLLT10P55197 1068 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 BIDP55957 195 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 TOP3AQ13472 1001 aaPredicted RBP6.63□□□□□ -1.35
VPS45-213ENST00000618148 C1DQ13901 141 aaKnown RBP6.63□□□□□ -1.35
VPS45-213ENST00000618148 MELKQ14680 651 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 KCTD21Q4G0X4 260 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 RBM48Q5RL73 367 aaKnown RBP6.63□□□□□ -1.35
VPS45-213ENST00000618148 RIPPLY2Q5TAB7 128 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 LINC01590Q5TEZ4 76 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 EEF1A1P5Q5VTE0 462 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 GTF2IRD2BQ6EKJ0 949 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 RTL6Q6ICC9 239 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 PLBD1Q6P4A8 553 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 SEM1Q6ZVN7 128 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 CHMP1BQ7LBR1 199 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 CXXC5Q7LFL8 322 aaKnown RBP6.63□□□□□ -1.35
VPS45-213ENST00000618148 GTF2IRD2Q86UP8 949 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 CPOQ8IVL8 374 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 ST6GALNAC3Q8NDV1 305 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 SDR9C7Q8NEX9 313 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 NOXO1Q8NFA2 376 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 RFKQ969G6 155 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 TMEM54Q969K7 222 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 GMPPAQ96IJ6 420 aaPredicted RBP6.63□□□□□ -1.35
VPS45-213ENST00000618148 ZFP3Q96NJ6 502 aa6.63□□□□□ -1.35
VPS45-213ENST00000618148 RACGAP1Q9H0H5 632 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms