RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 C6orf106Q9H6K1 298 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 TAS2R8Q9NYW2 309 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 SLC23A2Q9UGH3 650 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 ZNF281Q9Y2X9 895 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 AMDHD2Q9Y303 409 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 TRAPPC13A5PLN9 417 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 RNASEK-C17orf49H0YIS7 233 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 EIF1AYO14602 144 aaKnown RBP12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 IFNA17P01571 189 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 ACTA2P62736 377 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 ACTG2P63267 376 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 SPOCK1Q08629 439 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 NRROSQ86YC3 692 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 ZNF101Q8IZC7 436 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 INTS12Q96CB8 462 aaKnown RBP12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 RASD2Q96D21 266 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 Q96M85 177 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 C11orf49Q9H6J7 331 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 KCNJ16Q9NPI9 418 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 WASF3Q9UPY6 502 aa12.85□□□□□ -0.35
TNFRSF11A-205ENST00000616710 A0A0G2JK05 382 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 BTBD17A6NE02 478 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 PEX12O00623 359 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 CLN5O75503 358 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 HIST1H1CP16403 213 aaKnown RBP12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 CTNNB1P35222 781 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 EFNB2P52799 333 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 GAS1P54826 345 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 HTRA4P83105 476 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 ZNF85Q03923 595 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 MRPL2Q5T653 305 aaKnown RBP12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 SLC24A5Q71RS6 500 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 GAREM2Q75VX8 874 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 PPP1R3BQ86XI6 285 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 FAM83CQ9BQN1 747 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 RRAGCQ9HB90 399 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 TRBV5-4A0A0C4DH59 114 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 PQLC2LA1A4F0 135 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 RAB40ALP0C0E4 278 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 RPA2P15927 270 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 MUC1P15941 1255 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 GLP1RP43220 463 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 EIF1AXP47813 144 aaKnown RBP12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 ALG10BQ5I7T1 473 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 OR4C11Q6IEV9 310 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 RAB40AQ8WXH6 277 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 SLC25A38Q96DW6 304 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 MRPS33Q9Y291 106 aaKnown RBP12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 MEX3AA1L020 520 aaKnown RBP12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 OR2M5A3KFT3 312 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 TACSTD2P09758 323 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 RAB5CP51148 216 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 OR2A2Q6IF42 318 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 PWWP2BQ6NUJ5 590 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 STAC2Q6ZMT1 411 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 KLHDC8AQ8IYD2 350 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 OR2L5Q8NG80 312 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 OR56A1Q8NGH5 318 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 CCDC3Q9BQI4 270 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 NCDNQ9UBB6 729 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 NDOR1Q9UHB4 597 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 ZMIZ1Q9ULJ6 1067 aa12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 LSM5Q9Y4Y9 91 aaKnown RBP12.84□□□□□ -0.35
TNFRSF11A-205ENST00000616710 A0A1W2PRU2 124 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 K7ESM1 405 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 CDC40O60508 579 aaKnown RBP eCLIP12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 OR2F2O95006 317 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 IGHA1P01876 353 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 MPGP29372 298 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 SERPINF1P36955 418 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 SLC11A1P49279 550 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 ELAVL2Q12926 359 aaKnown RBP12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 OR2F1Q13607 317 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 PDE7AQ13946 482 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 CLLU1OSQ5K130 101 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 CD300LGQ6UXG3 332 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 GABRG1Q8N1C3 465 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 TMEM104Q8NE00 496 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 IP6K3Q96PC2 410 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 MED9Q9NWA0 146 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 KCNK6Q9Y257 313 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 C11orf98E9PRG8 122 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 SULT2B1O00204 365 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 ALOX12BO75342 701 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 F13BP05160 661 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 PCCBP05166 539 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 ASGR1P07306 291 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 ADCYAP1P18509 176 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 LAP3P28838 519 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 IRF5Q13568 498 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 DEFB134Q4QY38 66 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 LIPNQ5VXI9 398 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 RPL22L1Q6P5R6 122 aaKnown RBP12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 CAMKMTQ7Z624 323 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 TRIM2Q9C040 744 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 RXFP3Q9NSD7 469 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 SIRT3Q9NTG7 399 aaPredicted RBP12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 EMC8O43402 210 aa12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 PLGP00747 810 aaPredicted RBP12.83□□□□□ -0.36
TNFRSF11A-205ENST00000616710 IL5P05113 134 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms