RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 HTRA4P83105 476 aaPredicted RBP17.39■□□□□ 0.38
SPAST-203ENST00000615843 ZNF750Q32MQ0 723 aa17.39■□□□□ 0.38
SPAST-203ENST00000615843 GLYR1Q49A26 553 aaPredicted RBP17.39■□□□□ 0.38
SPAST-203ENST00000615843 PLXDC1Q8IUK5 500 aa17.39■□□□□ 0.38
SPAST-203ENST00000615843 GAB2Q9UQC2 676 aa17.39■□□□□ 0.38
SPAST-203ENST00000615843 PMPCAQ10713 525 aa17.39■□□□□ 0.37
SPAST-203ENST00000615843 SFRP5Q5T4F7 317 aa17.39■□□□□ 0.37
SPAST-203ENST00000615843 CD300LGQ6UXG3 332 aa17.39■□□□□ 0.37
SPAST-203ENST00000615843 MCATQ8IVS2 390 aaKnown RBP17.39■□□□□ 0.37
SPAST-203ENST00000615843 SPNS2Q8IVW8 549 aa17.39■□□□□ 0.37
SPAST-203ENST00000615843 TAAR8Q969N4 342 aa17.39■□□□□ 0.37
SPAST-203ENST00000615843 RASD2Q96D21 266 aa17.39■□□□□ 0.37
SPAST-203ENST00000615843 ARHGAP9Q9BRR9 750 aa17.39■□□□□ 0.37
SPAST-203ENST00000615843 NUMA1Q14980 2115 aa17.39■□□□□ 0.37
SPAST-203ENST00000615843 FITM1A5D6W6 292 aa17.39■□□□□ 0.37
SPAST-203ENST00000615843 OR5H14A6NHG9 310 aa17.39■□□□□ 0.37
SPAST-203ENST00000615843 CEBPZOSA8MTT3 80 aa17.39■□□□□ 0.37
SPAST-203ENST00000615843 H7C1Q1 480 aa17.39■□□□□ 0.37
SPAST-203ENST00000615843 CD14P08571 375 aa17.39■□□□□ 0.37
SPAST-203ENST00000615843 HNRNPA2B1P22626 353 aaKnown RBP17.39■□□□□ 0.37
SPAST-203ENST00000615843 SRPXP78539 464 aa17.39■□□□□ 0.37
SPAST-203ENST00000615843 BDH1Q02338 343 aa17.39■□□□□ 0.37
SPAST-203ENST00000615843 MFSD12Q6NUT3 480 aa17.39■□□□□ 0.37
SPAST-203ENST00000615843 FAAP20Q6NZ36 180 aa17.39■□□□□ 0.37
SPAST-203ENST00000615843 ZNF765Q7L2R6 523 aa17.39■□□□□ 0.37
SPAST-203ENST00000615843 C1orf87Q8N0U7 546 aa17.39■□□□□ 0.37
SPAST-203ENST00000615843 SLC39A9Q9NUM3 307 aa17.39■□□□□ 0.37
SPAST-203ENST00000615843 M0R082 166 aa17.39■□□□□ 0.37
SPAST-203ENST00000615843 RGS11O94810 467 aa17.39■□□□□ 0.37
SPAST-203ENST00000615843 CD53P19397 219 aa17.39■□□□□ 0.37
SPAST-203ENST00000615843 ZP3P21754 424 aa17.39■□□□□ 0.37
SPAST-203ENST00000615843 IHHQ14623 411 aa17.39■□□□□ 0.37
SPAST-203ENST00000615843 PTOV1Q86YD1 416 aa17.39■□□□□ 0.37
SPAST-203ENST00000615843 SPACA1Q9HBV2 294 aa17.39■□□□□ 0.37
SPAST-203ENST00000615843 ARGFXA6NJG6 315 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 SOX18P35713 384 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 RABIFP47224 123 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 SLC48A1Q6P1K1 146 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 ZNF620Q6ZNG0 422 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 TAS1R1Q7RTX1 841 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 NLGN4YQ8NFZ3 816 aaPredicted RBP17.38■□□□□ 0.37
SPAST-203ENST00000615843 OR5D18Q8NGL1 313 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 HPSE2Q8WWQ2 592 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 ATF6BQ99941 703 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 VN1R3Q9BXE9 311 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 TMEFF2Q9UIK5 374 aaPredicted RBP17.38■□□□□ 0.37
SPAST-203ENST00000615843 PRELID3BQ9Y3B1 194 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 SLC2A10O95528 541 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 MRPL19P49406 292 aaKnown RBP17.38■□□□□ 0.37
SPAST-203ENST00000615843 ECH1Q13011 328 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 MSMO1Q15800 293 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 ADIRFQ15847 76 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 RNF212Q495C1 297 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 CMTM4Q8IZR5 234 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 SLC16A11Q8NCK7 471 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 OR14L1PQ8NHC6 308 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 PAPOLGQ9BWT3 736 aaKnown RBP17.38■□□□□ 0.37
SPAST-203ENST00000615843 SCPEP1Q9HB40 452 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 ARRDC5A6NEK1 342 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 AIPO00170 330 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 HMGN4O00479 90 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 PLPP1O14494 284 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 P04436 131 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 ZNF93P35789 620 aaPredicted RBP17.38■□□□□ 0.37
SPAST-203ENST00000615843 MKXQ8IYA7 352 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 RDH10Q8IZV5 341 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 OR6C76A6NM76 312 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 BET1O15155 118 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 OR2B8PP59922 312 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 NKG7Q16617 165 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 OR5M10Q6IEU7 315 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 OR2AK2Q8NG84 335 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 CGGBP1Q9UFW8 167 aaPredicted RBP17.38■□□□□ 0.37
SPAST-203ENST00000615843 HS3ST2Q9Y278 367 aa17.38■□□□□ 0.37
SPAST-203ENST00000615843 ACSM4P0C7M7 580 aa17.37■□□□□ 0.37
SPAST-203ENST00000615843 MGMTP16455 207 aa17.37■□□□□ 0.37
SPAST-203ENST00000615843 RFX2P48378 723 aa17.37■□□□□ 0.37
SPAST-203ENST00000615843 SLC7A9P82251 487 aa17.37■□□□□ 0.37
SPAST-203ENST00000615843 FAM74A1Q5RGS3 127 aa17.37■□□□□ 0.37
SPAST-203ENST00000615843 SLC16A12Q6ZSM3 486 aa17.37■□□□□ 0.37
SPAST-203ENST00000615843 GABRG1Q8N1C3 465 aa17.37■□□□□ 0.37
SPAST-203ENST00000615843 LILRA3Q8N6C8 439 aaPredicted RBP17.37■□□□□ 0.37
SPAST-203ENST00000615843 RSC1A1Q92681 617 aa17.37■□□□□ 0.37
SPAST-203ENST00000615843 EXO1Q9UQ84 846 aaKnown RBP17.37■□□□□ 0.37
SPAST-203ENST00000615843 MTCP1P56278 107 aa17.37■□□□□ 0.37
SPAST-203ENST00000615843 OPN5Q6U736 354 aa17.37■□□□□ 0.37
SPAST-203ENST00000615843 MOB3CQ70IA8 216 aa17.37■□□□□ 0.37
SPAST-203ENST00000615843 TMEFF1Q8IYR6 380 aa17.37■□□□□ 0.37
SPAST-203ENST00000615843 FGGYQ96C11 551 aa17.37■□□□□ 0.37
SPAST-203ENST00000615843 NUDT22Q9BRQ3 303 aa17.37■□□□□ 0.37
SPAST-203ENST00000615843 UMAD1C9J7I0 102 aa17.37■□□□□ 0.37
SPAST-203ENST00000615843 OR7C1O76099 320 aaPredicted RBP17.37■□□□□ 0.37
SPAST-203ENST00000615843 RD3LP0DJH9 198 aa17.37■□□□□ 0.37
SPAST-203ENST00000615843 CTSAP10619 480 aa17.37■□□□□ 0.37
SPAST-203ENST00000615843 RNF4P78317 190 aa17.37■□□□□ 0.37
SPAST-203ENST00000615843 SYT9Q86SS6 491 aa17.37■□□□□ 0.37
SPAST-203ENST00000615843 TMEM217Q8N7C4 229 aa17.37■□□□□ 0.37
SPAST-203ENST00000615843 UPRTQ96BW1 309 aa17.37■□□□□ 0.37
SPAST-203ENST00000615843 NARFLQ9H6Q4 476 aa17.37■□□□□ 0.37
SPAST-203ENST00000615843 TAAR5O14804 337 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms