RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 MESTQ5EB52 335 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 SLC35F1Q5T1Q4 408 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 ARMC4Q5T2S8 1044 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 ZNF324BQ6AW86 544 aaPredicted RBP10.18□□□□□ -0.78
SLIRP-212ENST00000613856 FAM180AQ6UWF9 173 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 SLC35D2Q76EJ3 337 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 CXXC5Q7LFL8 322 aaKnown RBP10.18□□□□□ -0.78
SLIRP-212ENST00000613856 JAZF1Q86VZ6 243 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 GID4Q8IVV7 300 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 PM20D2Q8IYS1 436 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 ARIH2OSQ8N7S6 290 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 NPEPL1Q8NDH3 523 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 OR52E2Q8NGJ4 325 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 FAR1Q8WVX9 515 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 ASB10Q8WXI3 467 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 SARAFQ96BY9 339 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 RASD2Q96D21 266 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 WDYHV1Q96HA8 205 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 ZNF582Q96NG8 517 aaPredicted RBP10.18□□□□□ -0.78
SLIRP-212ENST00000613856 DDOQ99489 341 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 TIMP4Q99727 224 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 NMNAT2Q9BZQ4 307 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 DNAJC27Q9NZQ0 273 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 ZNF346Q9UL40 294 aaKnown RBP10.18□□□□□ -0.78
SLIRP-212ENST00000613856 NPIPA1Q9UND3 350 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 GPR52Q9Y2T5 361 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 NAV3Q8IVL0 2385 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 CACNA1CQ13936 2221 aa10.18□□□□□ -0.78
SLIRP-212ENST00000613856 ALPK2Q86TB3 2170 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 CENPBD1B2RD01 187 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 PRR23D1E9PI22 279 aaPredicted RBP10.17□□□□□ -0.78
SLIRP-212ENST00000613856 AHCYL1O43865 530 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 CYTIPO60759 359 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 RAMP1O60894 148 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 WISP2O76076 250 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 PLGP00747 810 aaPredicted RBP10.17□□□□□ -0.78
SLIRP-212ENST00000613856 PRR23D2P0DMB1 279 aaPredicted RBP10.17□□□□□ -0.78
SLIRP-212ENST00000613856 PIPP12273 146 aaPredicted RBP10.17□□□□□ -0.78
SLIRP-212ENST00000613856 HLA-DOBP13765 273 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 EDN3P14138 238 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 KLK2P20151 261 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 SLC2A5P22732 501 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 ACVR2AP27037 513 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 SLC15A1P46059 708 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 SLC25A1P53007 311 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 GTF3C1Q12789 2109 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 ITGADQ13349 1161 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 TMED1Q13445 227 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 SLC17A1Q14916 467 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 SMN1Q16637 294 aaKnown RBP10.17□□□□□ -0.78
SLIRP-212ENST00000613856 TMEM225Q6GV28 225 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 NIPAL3Q6P499 406 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 CPOQ8IVL8 374 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 SDR9C7Q8NEX9 313 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 OR9K2Q8NGE7 335 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 OR4K13Q8NH42 304 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 RNF128Q8TEB7 428 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 IPCEF1Q8WWN9 437 aaPredicted RBP10.17□□□□□ -0.78
SLIRP-212ENST00000613856 RFKQ969G6 155 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 CCDC120Q96HB5 630 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 ADAD1Q96M93 576 aaKnown RBP10.17□□□□□ -0.78
SLIRP-212ENST00000613856 GPR137Q96N19 417 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 UCN2Q96RP3 112 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 SLX1AQ9BQ83 275 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 TSPAN10Q9H1Z9 355 aaPredicted RBP10.17□□□□□ -0.78
SLIRP-212ENST00000613856 CCNB1IP1Q9NPC3 277 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 FKBP14Q9NWM8 211 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 SCN3BQ9NY72 215 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 CNOT2Q9NZN8 540 aaKnown RBP10.17□□□□□ -0.78
SLIRP-212ENST00000613856 VSX1Q9NZR4 365 aaPredicted RBP10.17□□□□□ -0.78
SLIRP-212ENST00000613856 KLHL13Q9P2N7 655 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 AASSQ9UDR5 926 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 MCTS1Q9ULC4 181 aaKnown RBP10.17□□□□□ -0.78
SLIRP-212ENST00000613856 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.17□□□□□ -0.78
SLIRP-212ENST00000613856 TPRKBQ9Y3C4 175 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 RPL36Q9Y3U8 105 aaKnown RBP10.17□□□□□ -0.78
SLIRP-212ENST00000613856 ZNF175Q9Y473 711 aa10.17□□□□□ -0.78
SLIRP-212ENST00000613856 NCOA6Q14686 2063 aaPredicted RBP10.17□□□□□ -0.78
SLIRP-212ENST00000613856 ZNF469Q96JG9 3925 aaPredicted RBP10.16□□□□□ -0.78
SLIRP-212ENST00000613856 IGKV3D-15A0A087WSY6 115 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 EFCAB10A6NFE3 127 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 ZNF716A6NP11 495 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 XKRYO14609 159 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 AKAP8O43823 692 aaKnown RBP10.16□□□□□ -0.78
SLIRP-212ENST00000613856 XPNPEP2O43895 674 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 MRPS14O60783 128 aaKnown RBP10.16□□□□□ -0.78
SLIRP-212ENST00000613856 FAM20BO75063 409 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 SERPINI2O75830 405 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 SYNGR4O95473 234 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 BCL10O95999 233 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 RENP00797 406 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 RPSAP08865 295 aaKnown RBP10.16□□□□□ -0.78
SLIRP-212ENST00000613856 IFNGR1P15260 489 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 ZNF43P17038 809 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 HTR1FP30939 366 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 ACVR1BP36896 505 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 CDKN2AP42771 156 aaKnown RBP10.16□□□□□ -0.78
SLIRP-212ENST00000613856 TDGF1P3P51864 188 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 CDH11P55287 796 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 SLC35A2P78381 396 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms