RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 ZNF35P13682 527 aa12.77□□□□□ -0.37
CTSA-216ENST00000607212 MAGOHP61326 146 aaKnown RBP12.77□□□□□ -0.37
CTSA-216ENST00000607212 MSMPQ1L6U9 139 aa12.77□□□□□ -0.37
CTSA-216ENST00000607212 TNFAIP8L3Q5GJ75 292 aa12.77□□□□□ -0.37
CTSA-216ENST00000607212 TMEM154Q6P9G4 183 aa12.77□□□□□ -0.37
CTSA-216ENST00000607212 COMTD1Q86VU5 262 aa12.77□□□□□ -0.37
CTSA-216ENST00000607212 BHLHE22Q8NFJ8 381 aaPredicted RBP12.77□□□□□ -0.37
CTSA-216ENST00000607212 OR5J2Q8NH18 312 aa12.77□□□□□ -0.37
CTSA-216ENST00000607212 OR6S1Q8NH40 331 aa12.77□□□□□ -0.37
CTSA-216ENST00000607212 ZNF416Q9BWM5 594 aa12.77□□□□□ -0.37
CTSA-216ENST00000607212 DENND2DQ9H6A0 471 aaPredicted RBP12.77□□□□□ -0.37
CTSA-216ENST00000607212 MRPL39Q9NYK5 338 aaKnown RBP12.77□□□□□ -0.37
CTSA-216ENST00000607212 CCDC167Q9P0B6 97 aa12.77□□□□□ -0.37
CTSA-216ENST00000607212 TAAR3PQ9P1P4 343 aa12.77□□□□□ -0.37
CTSA-216ENST00000607212 MYEF2Q9P2K5 600 aaKnown RBP12.77□□□□□ -0.37
CTSA-216ENST00000607212 CORO2BQ9UQ03 480 aa12.77□□□□□ -0.37
CTSA-216ENST00000607212 A0A0B4J2E0 115 aa12.76□□□□□ -0.37
CTSA-216ENST00000607212 A0A1B0GX12 115 aa12.76□□□□□ -0.37
CTSA-216ENST00000607212 KPNA4O00629 521 aaPredicted RBP12.76□□□□□ -0.37
CTSA-216ENST00000607212 PLPP3O14495 311 aa12.76□□□□□ -0.37
CTSA-216ENST00000607212 RNF13O43567 381 aa12.76□□□□□ -0.37
CTSA-216ENST00000607212 HIST1H2ABP04908 130 aa12.76□□□□□ -0.37
CTSA-216ENST00000607212 LCKP06239 509 aa12.76□□□□□ -0.37
CTSA-216ENST00000607212 GAAP10253 952 aa12.76□□□□□ -0.37
CTSA-216ENST00000607212 UMPSP11172 480 aa12.76□□□□□ -0.37
CTSA-216ENST00000607212 CDH12P55289 794 aa12.76□□□□□ -0.37
CTSA-216ENST00000607212 RBBP4Q09028 425 aa12.76□□□□□ -0.37
CTSA-216ENST00000607212 MELKQ14680 651 aa12.76□□□□□ -0.37
CTSA-216ENST00000607212 TMEM53Q6P2H8 277 aa12.76□□□□□ -0.37
CTSA-216ENST00000607212 HIST3H2AQ7L7L0 130 aa12.76□□□□□ -0.37
CTSA-216ENST00000607212 PXKQ7Z7A4 578 aa12.76□□□□□ -0.37
CTSA-216ENST00000607212 SMYD1Q8NB12 490 aa12.76□□□□□ -0.37
CTSA-216ENST00000607212 HIST1H2ACQ93077 130 aa12.76□□□□□ -0.37
CTSA-216ENST00000607212 YIPF5Q969M3 257 aa12.76□□□□□ -0.37
CTSA-216ENST00000607212 SPDL1Q96EA4 605 aa12.76□□□□□ -0.37
CTSA-216ENST00000607212 SLC41A3Q96GZ6 507 aa12.76□□□□□ -0.37
CTSA-216ENST00000607212 MCHR1Q99705 422 aa12.76□□□□□ -0.37
CTSA-216ENST00000607212 TCF7L2Q9NQB0 619 aa12.76□□□□□ -0.37
CTSA-216ENST00000607212 SLC25A37Q9NYZ2 338 aa12.76□□□□□ -0.37
CTSA-216ENST00000607212 SLAMF8Q9P0V8 285 aa12.76□□□□□ -0.37
CTSA-216ENST00000607212 A0A0A6YYJ9 748 aa12.75□□□□□ -0.37
CTSA-216ENST00000607212 SLC22A23A1A5C7 686 aa12.75□□□□□ -0.37
CTSA-216ENST00000607212 CPSF4LA6NMK7 179 aaKnown RBP12.75□□□□□ -0.37
CTSA-216ENST00000607212 M0R3H8 397 aa12.75□□□□□ -0.37
CTSA-216ENST00000607212 WNT9BO14905 357 aa12.75□□□□□ -0.37
CTSA-216ENST00000607212 DYSFO75923 2080 aa12.75□□□□□ -0.37
CTSA-216ENST00000607212 CH25HO95992 272 aa12.75□□□□□ -0.37
CTSA-216ENST00000607212 OR8G3PP0DMU2 310 aa12.75□□□□□ -0.37
CTSA-216ENST00000607212 DRD4P21917 467 aa12.75□□□□□ -0.37
CTSA-216ENST00000607212 CFPP27918 469 aa12.75□□□□□ -0.37
CTSA-216ENST00000607212 TMEM33P57088 247 aa12.75□□□□□ -0.37
CTSA-216ENST00000607212 MVKQ03426 396 aa12.75□□□□□ -0.37
CTSA-216ENST00000607212 AVPI1Q5T686 147 aa12.75□□□□□ -0.37
CTSA-216ENST00000607212 TTC33Q6PID6 262 aaPredicted RBP12.75□□□□□ -0.37
CTSA-216ENST00000607212 SLC35D2Q76EJ3 337 aa12.75□□□□□ -0.37
CTSA-216ENST00000607212 PIWIL3Q7Z3Z3 882 aaKnown RBP12.75□□□□□ -0.37
CTSA-216ENST00000607212 SKA3Q8IX90 412 aa12.75□□□□□ -0.37
CTSA-216ENST00000607212 SLC22A24Q8N4F4 322 aa12.75□□□□□ -0.37
CTSA-216ENST00000607212 C3orf56Q8N813 242 aa12.75□□□□□ -0.37
CTSA-216ENST00000607212 HIPK4Q8NE63 616 aa12.75□□□□□ -0.37
CTSA-216ENST00000607212 SLC30A7Q8NEW0 376 aa12.75□□□□□ -0.37
CTSA-216ENST00000607212 GCDHQ92947 438 aaPredicted RBP12.75□□□□□ -0.37
CTSA-216ENST00000607212 ZNF566Q969W8 418 aa12.75□□□□□ -0.37
CTSA-216ENST00000607212 SH3GL3Q99963 347 aa12.75□□□□□ -0.37
CTSA-216ENST00000607212 TMEM43Q9BTV4 400 aa12.75□□□□□ -0.37
CTSA-216ENST00000607212 PLA2G12AQ9BZM1 189 aa12.75□□□□□ -0.37
CTSA-216ENST00000607212 LRMDAQ9H2I8 198 aa12.75□□□□□ -0.37
CTSA-216ENST00000607212 GLTPQ9NZD2 209 aa12.75□□□□□ -0.37
CTSA-216ENST00000607212 VAPAQ9P0L0 249 aa12.75□□□□□ -0.37
CTSA-216ENST00000607212 NBEAL1Q6ZS30 2694 aa12.75□□□□□ -0.37
CTSA-216ENST00000607212 FZD7O75084 574 aa12.74□□□□□ -0.37
CTSA-216ENST00000607212 NCR1O76036 304 aa12.74□□□□□ -0.37
CTSA-216ENST00000607212 PNPP00491 289 aa12.74□□□□□ -0.37
CTSA-216ENST00000607212 MT-ATP6P00846 226 aa12.74□□□□□ -0.37
CTSA-216ENST00000607212 OPN1SWP03999 348 aa12.74□□□□□ -0.37
CTSA-216ENST00000607212 VIMP08670 466 aaKnown RBP12.74□□□□□ -0.37
CTSA-216ENST00000607212 CCL2P13500 99 aa12.74□□□□□ -0.37
CTSA-216ENST00000607212 ANPEPP15144 967 aa12.74□□□□□ -0.37
CTSA-216ENST00000607212 RAD52P43351 418 aa12.74□□□□□ -0.37
CTSA-216ENST00000607212 MAGEB1P43366 347 aa12.74□□□□□ -0.37
CTSA-216ENST00000607212 KLF3P57682 345 aaPredicted RBP12.74□□□□□ -0.37
CTSA-216ENST00000607212 CLRN1P58418 232 aa12.74□□□□□ -0.37
CTSA-216ENST00000607212 MYBPC1Q00872 1141 aa12.74□□□□□ -0.37
CTSA-216ENST00000607212 GLO1Q04760 184 aa12.74□□□□□ -0.37
CTSA-216ENST00000607212 PLP2Q04941 152 aa12.74□□□□□ -0.37
CTSA-216ENST00000607212 FXNQ16595 210 aa12.74□□□□□ -0.37
CTSA-216ENST00000607212 CYP51A1Q16850 503 aa12.74□□□□□ -0.37
CTSA-216ENST00000607212 TBC1D28Q2M2D7 210 aa12.74□□□□□ -0.37
CTSA-216ENST00000607212 AGKQ53H12 422 aa12.74□□□□□ -0.37
CTSA-216ENST00000607212 PAGE3Q5JUK9 113 aa12.74□□□□□ -0.37
CTSA-216ENST00000607212 LRIF1Q5T3J3 769 aa12.74□□□□□ -0.37
CTSA-216ENST00000607212 EPGNQ6UW88 154 aa12.74□□□□□ -0.37
CTSA-216ENST00000607212 ZNF771Q7L3S4 317 aaPredicted RBP12.74□□□□□ -0.37
CTSA-216ENST00000607212 WDFY1Q8IWB7 410 aa12.74□□□□□ -0.37
CTSA-216ENST00000607212 MSRB3Q8IXL7 192 aa12.74□□□□□ -0.37
CTSA-216ENST00000607212 TEX29Q8N6K0 151 aa12.74□□□□□ -0.37
CTSA-216ENST00000607212 VANGL1Q8TAA9 524 aaPredicted RBP12.74□□□□□ -0.37
CTSA-216ENST00000607212 SYNPRQ8TBG9 265 aa12.74□□□□□ -0.37
CTSA-216ENST00000607212 C11orf40Q8WZ69 217 aa12.74□□□□□ -0.37
CTSA-216ENST00000607212 ZNF385DQ9H6B1 395 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms