RNA–Protein interactions for RNA: ENST00000601392.5

CELF4-222, Transcript of CUGBP Elav-like family member 4, human

TSL 1 (best)

Gene CELF4, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-222	ENST00000601392	SLC37A3	Q8NCC5	494 aa		11.37	□□□□□ -0.59
CELF4-222	ENST00000601392	OR52E2	Q8NGJ4	325 aa		11.37	□□□□□ -0.59
CELF4-222	ENST00000601392	OR6X1	Q8NH79	312 aa		11.37	□□□□□ -0.59
CELF4-222	ENST00000601392	CNIH3	Q8TBE1	160 aa		11.37	□□□□□ -0.59
CELF4-222	ENST00000601392	IPCEF1	Q8WWN9	437 aa	Predicted RBP	11.37	□□□□□ -0.59
CELF4-222	ENST00000601392	INTS12	Q96CB8	462 aa	Known RBP	11.37	□□□□□ -0.59
CELF4-222	ENST00000601392	ZNF582	Q96NG8	517 aa	Predicted RBP	11.37	□□□□□ -0.59
CELF4-222	ENST00000601392	TSPAN32	Q96QS1	320 aa		11.37	□□□□□ -0.59
CELF4-222	ENST00000601392	IL4I1	Q96RQ9	567 aa		11.37	□□□□□ -0.59
CELF4-222	ENST00000601392	SRXN1	Q9BYN0	137 aa		11.37	□□□□□ -0.59
CELF4-222	ENST00000601392	VCX3A	Q9NNX9	186 aa		11.37	□□□□□ -0.59
CELF4-222	ENST00000601392	CCNB1IP1	Q9NPC3	277 aa		11.37	□□□□□ -0.59
CELF4-222	ENST00000601392	HAO2	Q9NYQ3	351 aa		11.37	□□□□□ -0.59
CELF4-222	ENST00000601392	VSX1	Q9NZR4	365 aa	Predicted RBP	11.37	□□□□□ -0.59
CELF4-222	ENST00000601392	SPRR3	Q9UBC9	169 aa		11.37	□□□□□ -0.59
CELF4-222	ENST00000601392	MCTS1	Q9ULC4	181 aa	Known RBP	11.37	□□□□□ -0.59
CELF4-222	ENST00000601392	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	11.37	□□□□□ -0.59
CELF4-222	ENST00000601392	MOK	Q9UQ07	419 aa		11.37	□□□□□ -0.59
CELF4-222	ENST00000601392	TEX13C	A0A0J9YWL9	993 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	IRGM	A1A4Y4	181 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	WIPF3	A6NGB9	483 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	SLC22A31	A6NKX4	558 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	ZNF716	A6NP11	495 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	ZNF814	B7Z6K7	855 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392		H0YC42	278 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	SLC1A7	O00341	560 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	CCL21	O00585	134 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	GPR171	O14626	319 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	TRAF3IP2	O43734	574 aa	Predicted RBP	11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	AKAP8	O43823	692 aa	Known RBP	11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	ZG16	O60844	167 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	ENTPD6	O75354	484 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	SLC2A10	O95528	541 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	REN	P00797	406 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	HOXD4	P09016	255 aa	Predicted RBP	11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	PIP	P12273	146 aa	Predicted RBP	11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	NR2C1	P13056	603 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	HLA-DOB	P13765	273 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	IFNGR1	P15260	489 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	ABO	P16442	354 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	ACVR2A	P27037	513 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	HTR1F	P30939	366 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	PTGER4	P35408	488 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	ACVR1B	P36896	505 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	CDKN2A	P42771	156 aa	Known RBP	11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	SLC15A1	P46059	708 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	BLVRA	P53004	296 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	POU3F1	Q03052	451 aa	Predicted RBP	11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	KRR1	Q13601	381 aa	Known RBP	11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	C1D	Q13901	141 aa	Known RBP	11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	CRMP1	Q14194	572 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	RNPS1	Q15287	305 aa	Known RBP	11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	GXYLT1	Q4G148	440 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	HIST2H2BC	Q6DN03	193 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	CREB3L2	Q70SY1	520 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	MEPCE	Q7L2J0	689 aa	Known RBP	11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	FCRLA	Q7L513	359 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	CXXC5	Q7LFL8	322 aa	Known RBP	11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	JAZF1	Q86VZ6	243 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	OR4K13	Q8NH42	304 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	RNF128	Q8TEB7	428 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	ASB10	Q8WXI3	467 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	RELT	Q969Z4	430 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	DNAJA3	Q96EY1	480 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	SLC25A44	Q96H78	314 aa	Predicted RBP	11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	ALG12	Q9BV10	488 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	MRPL13	Q9BYD1	178 aa	Known RBP	11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	HINT3	Q9NQE9	182 aa	Known RBP	11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	GLRX2	Q9NS18	164 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	FKBP14	Q9NWM8	211 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	KLHL13	Q9P2N7	655 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	WARS2	Q9UGM6	360 aa	Known RBP	11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	PSORS1C1	Q9UIG5	152 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	RCE1	Q9Y256	329 aa		11.36	□□□□□ -0.59
CELF4-222	ENST00000601392	PRSS37	A4D1T9	235 aa		11.35	□□□□□ -0.59
CELF4-222	ENST00000601392	EFCAB10	A6NFE3	127 aa		11.35	□□□□□ -0.59
CELF4-222	ENST00000601392	TRIM64C	A6NLI5	447 aa		11.35	□□□□□ -0.59
CELF4-222	ENST00000601392	ZNF724	A8MTY0	619 aa		11.35	□□□□□ -0.59
CELF4-222	ENST00000601392	NPIPA2	E9PIF3	369 aa		11.35	□□□□□ -0.59
CELF4-222	ENST00000601392	NPIPA3	F8WFD2	350 aa		11.35	□□□□□ -0.59
CELF4-222	ENST00000601392	CLDN1	O95832	211 aa		11.35	□□□□□ -0.59
CELF4-222	ENST00000601392	TFAP2A	P05549	437 aa		11.35	□□□□□ -0.59
CELF4-222	ENST00000601392	FCGR2A	P12318	317 aa		11.35	□□□□□ -0.59
CELF4-222	ENST00000601392	GABRA1	P14867	456 aa		11.35	□□□□□ -0.59
CELF4-222	ENST00000601392	SLC2A5	P22732	501 aa		11.35	□□□□□ -0.59
CELF4-222	ENST00000601392	EEF1B2	P24534	225 aa	Known RBP	11.35	□□□□□ -0.59
CELF4-222	ENST00000601392	CA7	P43166	264 aa		11.35	□□□□□ -0.59
CELF4-222	ENST00000601392	SLC35A2	P78381	396 aa		11.35	□□□□□ -0.59
CELF4-222	ENST00000601392	LGALS3BP	Q08380	585 aa		11.35	□□□□□ -0.59
CELF4-222	ENST00000601392	HIST3H3	Q16695	136 aa		11.35	□□□□□ -0.59
CELF4-222	ENST00000601392	KLHL22	Q53GT1	634 aa		11.35	□□□□□ -0.59
CELF4-222	ENST00000601392	MEST	Q5EB52	335 aa		11.35	□□□□□ -0.59
CELF4-222	ENST00000601392	RNLS	Q5VYX0	342 aa		11.35	□□□□□ -0.59
CELF4-222	ENST00000601392	KDM8	Q8N371	416 aa		11.35	□□□□□ -0.59
CELF4-222	ENST00000601392	ZIC4	Q8N9L1	334 aa		11.35	□□□□□ -0.59
CELF4-222	ENST00000601392	BPIFB6	Q8NFQ5	453 aa		11.35	□□□□□ -0.59
CELF4-222	ENST00000601392	OR9K2	Q8NGE7	335 aa		11.35	□□□□□ -0.59
CELF4-222	ENST00000601392	MYDGF	Q969H8	173 aa		11.35	□□□□□ -0.59
CELF4-222	ENST00000601392	TMEM45B	Q96B21	275 aa		11.35	□□□□□ -0.59
CELF4-222	ENST00000601392	KCNK17	Q96T54	332 aa		11.35	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms