RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 SPARTQ8N0X7 666 aa20.12■□□□□ 0.81
IRF3-228ENST00000601291 PROKR2Q8NFJ6 384 aa20.12■□□□□ 0.81
IRF3-228ENST00000601291 KISS1RQ969F8 398 aaPredicted RBP20.12■□□□□ 0.81
IRF3-228ENST00000601291 LGALS12Q96DT0 336 aa20.12■□□□□ 0.81
IRF3-228ENST00000601291 SLC25A44Q96H78 314 aaPredicted RBP20.12■□□□□ 0.81
IRF3-228ENST00000601291 KCNK17Q96T54 332 aa20.12■□□□□ 0.81
IRF3-228ENST00000601291 ALG12Q9BV10 488 aa20.12■□□□□ 0.81
IRF3-228ENST00000601291 MED12Q93074 2177 aa20.12■□□□□ 0.81
IRF3-228ENST00000601291 DMXL2Q8TDJ6 3036 aa20.11■□□□□ 0.81
IRF3-228ENST00000601291 SLC22A23A1A5C7 686 aa20.11■□□□□ 0.81
IRF3-228ENST00000601291 SLC35F4A4IF30 521 aa20.11■□□□□ 0.81
IRF3-228ENST00000601291 OR14I1A6ND48 311 aa20.11■□□□□ 0.81
IRF3-228ENST00000601291 ZNF716A6NP11 495 aa20.11■□□□□ 0.81
IRF3-228ENST00000601291 RAB36O95755 333 aa20.11■□□□□ 0.81
IRF3-228ENST00000601291 MT-ND2P03891 347 aa20.11■□□□□ 0.81
IRF3-228ENST00000601291 NR2C1P13056 603 aa20.11■□□□□ 0.81
IRF3-228ENST00000601291 CRABP1P29762 137 aa20.11■□□□□ 0.81
IRF3-228ENST00000601291 CLRN1P58418 232 aa20.11■□□□□ 0.81
IRF3-228ENST00000601291 RUNX1T1Q06455 604 aa20.11■□□□□ 0.81
IRF3-228ENST00000601291 RASGEF1BQ0VAM2 473 aa20.11■□□□□ 0.81
IRF3-228ENST00000601291 EXD3Q8N9H8 876 aa20.11■□□□□ 0.81
IRF3-228ENST00000601291 RNF128Q8TEB7 428 aa20.11■□□□□ 0.81
IRF3-228ENST00000601291 GPR137Q96N19 417 aa20.11■□□□□ 0.81
IRF3-228ENST00000601291 SRA1Q9HD15 236 aaKnown RBP20.11■□□□□ 0.81
IRF3-228ENST00000601291 HAO2Q9NYQ3 351 aa20.11■□□□□ 0.81
IRF3-228ENST00000601291 KLHL9Q9P2J3 617 aa20.11■□□□□ 0.81
IRF3-228ENST00000601291 FKBP7Q9Y680 259 aa20.11■□□□□ 0.81
IRF3-228ENST00000601291 COMMD3-BMI1R4GMX3 469 aa20.11■□□□□ 0.81
IRF3-228ENST00000601291 PTPRQQ9UMZ3 2332 aa20.11■□□□□ 0.81
IRF3-228ENST00000601291 A0A1B0GTH9 108 aa20.1■□□□□ 0.81
IRF3-228ENST00000601291 GLCEO94923 617 aa20.1■□□□□ 0.81
IRF3-228ENST00000601291 DCKP27707 260 aa20.1■□□□□ 0.81
IRF3-228ENST00000601291 GSTT1P30711 240 aa20.1■□□□□ 0.81
IRF3-228ENST00000601291 SYT14Q8NB59 555 aa20.1■□□□□ 0.81
IRF3-228ENST00000601291 NOXO1Q8NFA2 376 aa20.1■□□□□ 0.81
IRF3-228ENST00000601291 OR51G2Q8NGK0 314 aa20.1■□□□□ 0.81
IRF3-228ENST00000601291 OR52I1Q8NGK6 324 aa20.1■□□□□ 0.81
IRF3-228ENST00000601291 OR6K6Q8NGW6 343 aa20.1■□□□□ 0.81
IRF3-228ENST00000601291 FNDC8Q8TC99 324 aa20.1■□□□□ 0.81
IRF3-228ENST00000601291 TSSK2Q96PF2 358 aa20.1■□□□□ 0.81
IRF3-228ENST00000601291 SIGLEC11Q96RL6 698 aa20.1■□□□□ 0.81
IRF3-228ENST00000601291 NUAK2Q9H093 628 aa20.1■□□□□ 0.81
IRF3-228ENST00000601291 DIMT1Q9UNQ2 313 aaKnown RBP20.1■□□□□ 0.81
IRF3-228ENST00000601291 EXOGQ9Y2C4 368 aaKnown RBP20.1■□□□□ 0.81
IRF3-228ENST00000601291 KIAA1549Q9HCM3 1950 aa20.1■□□□□ 0.81
IRF3-228ENST00000601291 CENPBD1B2RD01 187 aa20.09■□□□□ 0.81
IRF3-228ENST00000601291 PGA4P0DJD7 388 aa20.09■□□□□ 0.81
IRF3-228ENST00000601291 PGA3P0DJD8 388 aa20.09■□□□□ 0.81
IRF3-228ENST00000601291 C21orf33P30042 268 aaPredicted RBP20.09■□□□□ 0.81
IRF3-228ENST00000601291 CENPAP49450 140 aa20.09■□□□□ 0.81
IRF3-228ENST00000601291 NR1H2P55055 460 aa20.09■□□□□ 0.81
IRF3-228ENST00000601291 CAMK2DQ13557 499 aa20.09■□□□□ 0.81
IRF3-228ENST00000601291 KRTCAP3Q53RY4 240 aa20.09■□□□□ 0.81
IRF3-228ENST00000601291 KCTD8Q6ZWB6 473 aa20.09■□□□□ 0.81
IRF3-228ENST00000601291 OR6V1Q8N148 313 aa20.09■□□□□ 0.81
IRF3-228ENST00000601291 TEX19Q8NA77 164 aa20.09■□□□□ 0.81
IRF3-228ENST00000601291 POMGNT2Q8NAT1 580 aa20.09■□□□□ 0.81
IRF3-228ENST00000601291 OR51L1Q8NGJ5 315 aa20.09■□□□□ 0.81
IRF3-228ENST00000601291 FNDC9Q8TBE3 224 aa20.09■□□□□ 0.81
IRF3-228ENST00000601291 ABHD3Q8WU67 409 aa20.09■□□□□ 0.81
IRF3-228ENST00000601291 ZNF385AQ96PM9 386 aaKnown RBP20.09■□□□□ 0.81
IRF3-228ENST00000601291 RBP7Q96R05 134 aa20.09■□□□□ 0.81
IRF3-228ENST00000601291 TUBA1CQ9BQE3 449 aa20.09■□□□□ 0.81
IRF3-228ENST00000601291 MRPL13Q9BYD1 178 aaKnown RBP20.09■□□□□ 0.81
IRF3-228ENST00000601291 RERGLQ9H628 205 aa20.09■□□□□ 0.81
IRF3-228ENST00000601291 FGF20Q9NP95 211 aaPredicted RBP20.09■□□□□ 0.81
IRF3-228ENST00000601291 EMC3Q9P0I2 261 aa20.09■□□□□ 0.81
IRF3-228ENST00000601291 ZNF175Q9Y473 711 aa20.09■□□□□ 0.81
IRF3-228ENST00000601291 PCDHGB1Q9Y5G3 927 aa20.09■□□□□ 0.81
IRF3-228ENST00000601291 FLVCR1Q9Y5Y0 555 aa20.09■□□□□ 0.81
IRF3-228ENST00000601291 GPR171O14626 319 aa20.08■□□□□ 0.81
IRF3-228ENST00000601291 SLC16A7O60669 478 aa20.08■□□□□ 0.81
IRF3-228ENST00000601291 FCGR2AP12318 317 aa20.08■□□□□ 0.81
IRF3-228ENST00000601291 MYL12AP19105 171 aa20.08■□□□□ 0.81
IRF3-228ENST00000601291 PYCR1P32322 319 aa20.08■□□□□ 0.81
IRF3-228ENST00000601291 MVKQ03426 396 aa20.08■□□□□ 0.81
IRF3-228ENST00000601291 DBPQ10586 325 aaPredicted RBP20.08■□□□□ 0.81
IRF3-228ENST00000601291 GGTLC2Q14390 218 aa20.08■□□□□ 0.81
IRF3-228ENST00000601291 RNPS1Q15287 305 aaKnown RBP20.08■□□□□ 0.81
IRF3-228ENST00000601291 B3GLCTQ6Y288 498 aa20.08■□□□□ 0.81
IRF3-228ENST00000601291 ZBTB46Q86UZ6 589 aa20.08■□□□□ 0.81
IRF3-228ENST00000601291 Q8NA96 180 aa20.08■□□□□ 0.81
IRF3-228ENST00000601291 ZMYND19Q96E35 227 aaPredicted RBP20.08■□□□□ 0.81
IRF3-228ENST00000601291 CDCA4Q9BXL8 241 aa20.08■□□□□ 0.81
IRF3-228ENST00000601291 RACGAP1Q9H0H5 632 aa20.08■□□□□ 0.81
IRF3-228ENST00000601291 RCE1Q9Y256 329 aa20.08■□□□□ 0.81
IRF3-228ENST00000601291 APOL3O95236 402 aa20.08■□□□□ 0.8
IRF3-228ENST00000601291 RPL5P46777 297 aaKnown RBP20.08■□□□□ 0.8
IRF3-228ENST00000601291 BLVRAP53004 296 aa20.08■□□□□ 0.8
IRF3-228ENST00000601291 THEM4Q5T1C6 240 aa20.08■□□□□ 0.8
IRF3-228ENST00000601291 CARD17Q5XLA6 110 aa20.08■□□□□ 0.8
IRF3-228ENST00000601291 B3GNT6Q6ZMB0 384 aa20.08■□□□□ 0.8
IRF3-228ENST00000601291 SHFQ7M4L6 423 aa20.08■□□□□ 0.8
IRF3-228ENST00000601291 MCEMP1Q8IX19 187 aa20.08■□□□□ 0.8
IRF3-228ENST00000601291 ZIC4Q8N9L1 334 aa20.08■□□□□ 0.8
IRF3-228ENST00000601291 OR4F15Q8NGB8 312 aa20.08■□□□□ 0.8
IRF3-228ENST00000601291 OR2M2Q96R28 347 aa20.08■□□□□ 0.8
IRF3-228ENST00000601291 CNN2Q99439 309 aaKnown RBP20.08■□□□□ 0.8
IRF3-228ENST00000601291 CHCHD3Q9NX63 227 aaKnown RBP20.08■□□□□ 0.8
IRF3-228ENST00000601291 ZMIZ1Q9ULJ6 1067 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms