RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 CPSF4LA6NMK7 179 aaKnown RBP14.63□□□□□ -0.07
SCAF1-204ENST00000601038 M0R233 179 aa14.63□□□□□ -0.07
SCAF1-204ENST00000601038 UBL3O95164 117 aa14.63□□□□□ -0.07
SCAF1-204ENST00000601038 OPN1SWP03999 348 aa14.63□□□□□ -0.07
SCAF1-204ENST00000601038 IL2RGP31785 369 aa14.63□□□□□ -0.07
SCAF1-204ENST00000601038 MTPNP58546 118 aa14.63□□□□□ -0.07
SCAF1-204ENST00000601038 NPTX1Q15818 432 aa14.63□□□□□ -0.07
SCAF1-204ENST00000601038 ZNF74Q16587 644 aa14.63□□□□□ -0.07
SCAF1-204ENST00000601038 FXNQ16595 210 aa14.63□□□□□ -0.07
SCAF1-204ENST00000601038 TTMPQ5BVD1 217 aa14.63□□□□□ -0.07
SCAF1-204ENST00000601038 TTC33Q6PID6 262 aaPredicted RBP14.63□□□□□ -0.07
SCAF1-204ENST00000601038 UGT2A3Q6UWM9 527 aa14.63□□□□□ -0.07
SCAF1-204ENST00000601038 WDR88Q6ZMY6 472 aa14.63□□□□□ -0.07
SCAF1-204ENST00000601038 SLC35D2Q76EJ3 337 aa14.63□□□□□ -0.07
SCAF1-204ENST00000601038 RETREG3Q86VR2 466 aa14.63□□□□□ -0.07
SCAF1-204ENST00000601038 SLC30A8Q8IWU4 369 aa14.63□□□□□ -0.07
SCAF1-204ENST00000601038 ADAMTS16Q8TE57 1224 aa14.63□□□□□ -0.07
SCAF1-204ENST00000601038 TSPEARQ8WU66 669 aa14.63□□□□□ -0.07
SCAF1-204ENST00000601038 TMEM54Q969K7 222 aa14.63□□□□□ -0.07
SCAF1-204ENST00000601038 TPK1Q9H3S4 243 aa14.63□□□□□ -0.07
SCAF1-204ENST00000601038 NANSQ9NR45 359 aa14.63□□□□□ -0.07
SCAF1-204ENST00000601038 TAS2R5Q9NYW4 299 aa14.63□□□□□ -0.07
SCAF1-204ENST00000601038 GLTPQ9NZD2 209 aa14.63□□□□□ -0.07
SCAF1-204ENST00000601038 ANGPT2O15123 496 aa14.62□□□□□ -0.07
SCAF1-204ENST00000601038 ENTPD5O75356 428 aa14.62□□□□□ -0.07
SCAF1-204ENST00000601038 LYPD3O95274 346 aa14.62□□□□□ -0.07
SCAF1-204ENST00000601038 CH25HO95992 272 aa14.62□□□□□ -0.07
SCAF1-204ENST00000601038 THY1P04216 161 aa14.62□□□□□ -0.07
SCAF1-204ENST00000601038 APEX1P27695 318 aaKnown RBP14.62□□□□□ -0.07
SCAF1-204ENST00000601038 RPS23P62266 143 aaKnown RBP14.62□□□□□ -0.07
SCAF1-204ENST00000601038 GALK2Q01415 458 aa14.62□□□□□ -0.07
SCAF1-204ENST00000601038 SELPLGQ14242 412 aa14.62□□□□□ -0.07
SCAF1-204ENST00000601038 RAB39AQ14964 217 aa14.62□□□□□ -0.07
SCAF1-204ENST00000601038 GKAP1Q5VSY0 366 aaPredicted RBP14.62□□□□□ -0.07
SCAF1-204ENST00000601038 LRFN4Q6PJG9 635 aa14.62□□□□□ -0.07
SCAF1-204ENST00000601038 PATL1Q86TB9 770 aaKnown RBP14.62□□□□□ -0.07
SCAF1-204ENST00000601038 SKA3Q8IX90 412 aa14.62□□□□□ -0.07
SCAF1-204ENST00000601038 LINC01356Q8N9X3 169 aa14.62□□□□□ -0.07
SCAF1-204ENST00000601038 SLC25A44Q96H78 314 aaPredicted RBP14.62□□□□□ -0.07
SCAF1-204ENST00000601038 C1orf159Q96HA4 380 aa14.62□□□□□ -0.07
SCAF1-204ENST00000601038 MPP4Q96JB8 637 aa14.62□□□□□ -0.07
SCAF1-204ENST00000601038 SNX18Q96RF0 628 aa14.62□□□□□ -0.07
SCAF1-204ENST00000601038 SLC19A3Q9BZV2 496 aa14.62□□□□□ -0.07
SCAF1-204ENST00000601038 ZNF385DQ9H6B1 395 aa14.62□□□□□ -0.07
SCAF1-204ENST00000601038 KAT8Q9H7Z6 458 aaKnown RBP14.62□□□□□ -0.07
SCAF1-204ENST00000601038 INTS9Q9NV88 658 aaKnown RBP14.62□□□□□ -0.07
SCAF1-204ENST00000601038 TRIM33Q9UPN9 1127 aa14.62□□□□□ -0.07
SCAF1-204ENST00000601038 TRAPPC13A5PLN9 417 aa14.61□□□□□ -0.07
SCAF1-204ENST00000601038 LYNX1G3V0Z9 82 aa14.61□□□□□ -0.07
SCAF1-204ENST00000601038 RNF13O43567 381 aa14.61□□□□□ -0.07
SCAF1-204ENST00000601038 SERPINA5P05154 406 aa14.61□□□□□ -0.07
SCAF1-204ENST00000601038 OR8G3PP0DMU2 310 aa14.61□□□□□ -0.07
SCAF1-204ENST00000601038 LYNX1P0DP58 116 aa14.61□□□□□ -0.07
SCAF1-204ENST00000601038 NFYCQ13952 458 aa14.61□□□□□ -0.07
SCAF1-204ENST00000601038 TRIP10Q15642 601 aa14.61□□□□□ -0.07
SCAF1-204ENST00000601038 INTS11Q5TA45 600 aaKnown RBP14.61□□□□□ -0.07
SCAF1-204ENST00000601038 RBM45Q8IUH3 476 aaKnown RBP14.61□□□□□ -0.07
SCAF1-204ENST00000601038 SLC22A24Q8N4F4 322 aa14.61□□□□□ -0.07
SCAF1-204ENST00000601038 OR4D11Q8NGI4 311 aa14.61□□□□□ -0.07
SCAF1-204ENST00000601038 SLC26A7Q8TE54 656 aa14.61□□□□□ -0.07
SCAF1-204ENST00000601038 ZNF566Q969W8 418 aa14.61□□□□□ -0.07
SCAF1-204ENST00000601038 SYT3Q9BQG1 590 aa14.61□□□□□ -0.07
SCAF1-204ENST00000601038 ZNF426Q9BUY5 554 aa14.61□□□□□ -0.07
SCAF1-204ENST00000601038 C19orf24Q9BVV8 132 aa14.61□□□□□ -0.07
SCAF1-204ENST00000601038 PCDHAC1Q9H158 963 aa14.61□□□□□ -0.07
SCAF1-204ENST00000601038 SLC7A8Q9UHI5 535 aa14.61□□□□□ -0.07
SCAF1-204ENST00000601038 TMEFF2Q9UIK5 374 aaPredicted RBP14.61□□□□□ -0.07
SCAF1-204ENST00000601038 ZNF229Q9UJW7 825 aa14.61□□□□□ -0.07
SCAF1-204ENST00000601038 SLC7A7Q9UM01 511 aa14.61□□□□□ -0.07
SCAF1-204ENST00000601038 HIST1H2ABP04908 130 aa14.6□□□□□ -0.07
SCAF1-204ENST00000601038 ASAH2BP0C7U1 165 aa14.6□□□□□ -0.07
SCAF1-204ENST00000601038 PATE4P0C8F1 98 aa14.6□□□□□ -0.07
SCAF1-204ENST00000601038 CD247P20963 164 aa14.6□□□□□ -0.07
SCAF1-204ENST00000601038 LSP1P33241 339 aa14.6□□□□□ -0.07
SCAF1-204ENST00000601038 PCGF2P35227 344 aa14.6□□□□□ -0.07
SCAF1-204ENST00000601038 CDH15P55291 814 aa14.6□□□□□ -0.07
SCAF1-204ENST00000601038 ELFN2Q5R3F8 820 aa14.6□□□□□ -0.07
SCAF1-204ENST00000601038 LIPNQ5VXI9 398 aa14.6□□□□□ -0.07
SCAF1-204ENST00000601038 REP15Q6BDI9 236 aa14.6□□□□□ -0.07
SCAF1-204ENST00000601038 HIST3H2AQ7L7L0 130 aa14.6□□□□□ -0.07
SCAF1-204ENST00000601038 TSPYL5Q86VY4 417 aaPredicted RBP14.6□□□□□ -0.07
SCAF1-204ENST00000601038 ZNF584Q8IVC4 421 aa14.6□□□□□ -0.07
SCAF1-204ENST00000601038 LRRC17Q8N6Y2 441 aa14.6□□□□□ -0.07
SCAF1-204ENST00000601038 OR10A6Q8NH74 314 aa14.6□□□□□ -0.07
SCAF1-204ENST00000601038 VANGL1Q8TAA9 524 aaPredicted RBP14.6□□□□□ -0.07
SCAF1-204ENST00000601038 FGFBP3Q8TAT2 258 aa14.6□□□□□ -0.07
SCAF1-204ENST00000601038 RASSF5Q8WWW0 418 aa14.6□□□□□ -0.07
SCAF1-204ENST00000601038 HIST1H2ACQ93077 130 aa14.6□□□□□ -0.07
SCAF1-204ENST00000601038 TAMM41Q96BW9 452 aa14.6□□□□□ -0.07
SCAF1-204ENST00000601038 THOC1Q96FV9 657 aaKnown RBP14.6□□□□□ -0.07
SCAF1-204ENST00000601038 MAGEB18Q96M61 343 aa14.6□□□□□ -0.07
SCAF1-204ENST00000601038 TMEM38BQ9NVV0 291 aa14.6□□□□□ -0.07
SCAF1-204ENST00000601038 DHHO43323 396 aa14.59□□□□□ -0.07
SCAF1-204ENST00000601038 FARS2O95363 451 aaKnown RBP14.59□□□□□ -0.07
SCAF1-204ENST00000601038 BCL10O95999 233 aa14.59□□□□□ -0.07
SCAF1-204ENST00000601038 VIMP08670 466 aaKnown RBP14.59□□□□□ -0.07
SCAF1-204ENST00000601038 PGA4P0DJD7 388 aa14.59□□□□□ -0.07
SCAF1-204ENST00000601038 PGA3P0DJD8 388 aa14.59□□□□□ -0.07
SCAF1-204ENST00000601038 TCN1P20061 433 aaPredicted RBP14.59□□□□□ -0.07
SCAF1-204ENST00000601038 COL8A2P25067 703 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms