RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 PGGHGQ32M88 737 aa13.73□□□□□ -0.21
RPS28-203ENST00000600659 LCN8Q6JVE9 175 aa13.73□□□□□ -0.21
RPS28-203ENST00000600659 CYP2R1Q6VVX0 501 aa13.73□□□□□ -0.21
RPS28-203ENST00000600659 TMPRSS11FQ6ZWK6 438 aa13.73□□□□□ -0.21
RPS28-203ENST00000600659 HIST3H2AQ7L7L0 130 aa13.73□□□□□ -0.21
RPS28-203ENST00000600659 ARHGAP24Q8N264 748 aa13.73□□□□□ -0.21
RPS28-203ENST00000600659 OR13C2Q8NGS9 318 aa13.73□□□□□ -0.21
RPS28-203ENST00000600659 HIST1H2ACQ93077 130 aa13.73□□□□□ -0.21
RPS28-203ENST00000600659 SLC25A44Q96H78 314 aaPredicted RBP13.73□□□□□ -0.21
RPS28-203ENST00000600659 CLPTM1LQ96KA5 538 aa13.73□□□□□ -0.21
RPS28-203ENST00000600659 ZNF75AQ96N20 296 aa13.73□□□□□ -0.21
RPS28-203ENST00000600659 CCL19Q99731 98 aa13.73□□□□□ -0.21
RPS28-203ENST00000600659 ULBP2Q9BZM5 246 aa13.73□□□□□ -0.21
RPS28-203ENST00000600659 INIPQ9NRY2 104 aa13.73□□□□□ -0.21
RPS28-203ENST00000600659 GLTPQ9NZD2 209 aa13.73□□□□□ -0.21
RPS28-203ENST00000600659 MAGED1Q9Y5V3 778 aaPredicted RBP13.73□□□□□ -0.21
RPS28-203ENST00000600659 FLNAP21333 2647 aaKnown RBP13.72□□□□□ -0.21
RPS28-203ENST00000600659 ZNF726A6NNF4 738 aa13.72□□□□□ -0.21
RPS28-203ENST00000600659 E7EQL1 145 aa13.72□□□□□ -0.21
RPS28-203ENST00000600659 IGHMP01871 453 aa13.72□□□□□ -0.21
RPS28-203ENST00000600659 HOXC12P31275 282 aa13.72□□□□□ -0.21
RPS28-203ENST00000600659 OMPP47874 163 aa13.72□□□□□ -0.21
RPS28-203ENST00000600659 FXYD6P3P58550 94 aa13.72□□□□□ -0.21
RPS28-203ENST00000600659 KLHL24Q6TFL4 600 aa13.72□□□□□ -0.21
RPS28-203ENST00000600659 TMEM108Q6UXF1 575 aa13.72□□□□□ -0.21
RPS28-203ENST00000600659 ZNF730Q6ZMV8 503 aa13.72□□□□□ -0.21
RPS28-203ENST00000600659 CYP4Z1Q86W10 505 aa13.72□□□□□ -0.21
RPS28-203ENST00000600659 NOXO1Q8NFA2 376 aa13.72□□□□□ -0.21
RPS28-203ENST00000600659 OR6N1Q8NGY5 312 aa13.72□□□□□ -0.21
RPS28-203ENST00000600659 HDAC2Q92769 488 aaKnown RBP13.72□□□□□ -0.21
RPS28-203ENST00000600659 FBXW5Q969U6 566 aa13.72□□□□□ -0.21
RPS28-203ENST00000600659 ZNF566Q969W8 418 aa13.72□□□□□ -0.21
RPS28-203ENST00000600659 SLC7A6OSQ96CW6 309 aaPredicted RBP13.72□□□□□ -0.21
RPS28-203ENST00000600659 ZNF347Q96SE7 839 aa13.72□□□□□ -0.21
RPS28-203ENST00000600659 GPA33Q99795 319 aa13.72□□□□□ -0.21
RPS28-203ENST00000600659 IL1RAPQ9NPH3 570 aa13.72□□□□□ -0.21
RPS28-203ENST00000600659 B3GNT2Q9NY97 397 aa13.72□□□□□ -0.21
RPS28-203ENST00000600659 PRPF19Q9UMS4 504 aaKnown RBP13.72□□□□□ -0.21
RPS28-203ENST00000600659 EDARQ9UNE0 448 aa13.72□□□□□ -0.21
RPS28-203ENST00000600659 IGKV1D-43A0A0B4J1Z2 117 aa13.71□□□□□ -0.21
RPS28-203ENST00000600659 EFCAB9A8MZ26 197 aa13.71□□□□□ -0.21
RPS28-203ENST00000600659 OVOL3O00110 214 aa13.71□□□□□ -0.21
RPS28-203ENST00000600659 GMNNO75496 209 aa13.71□□□□□ -0.21
RPS28-203ENST00000600659 TRMUO75648 421 aaKnown RBP13.71□□□□□ -0.21
RPS28-203ENST00000600659 BCL10O95999 233 aa13.71□□□□□ -0.21
RPS28-203ENST00000600659 CD8AP01732 235 aa13.71□□□□□ -0.21
RPS28-203ENST00000600659 CELA3BP08861 270 aa13.71□□□□□ -0.21
RPS28-203ENST00000600659 HOXB1P14653 301 aaPredicted RBP13.71□□□□□ -0.21
RPS28-203ENST00000600659 B4GALT1P15291 398 aa13.71□□□□□ -0.21
RPS28-203ENST00000600659 MAGEA2P43356 314 aa13.71□□□□□ -0.21
RPS28-203ENST00000600659 CDH11P55287 796 aa13.71□□□□□ -0.21
RPS28-203ENST00000600659 TRIM25Q14258 630 aaKnown RBP13.71□□□□□ -0.21
RPS28-203ENST00000600659 ALG10Q5BKT4 473 aa13.71□□□□□ -0.21
RPS28-203ENST00000600659 KLHL17Q6TDP4 642 aa13.71□□□□□ -0.21
RPS28-203ENST00000600659 IGFN1Q86VF2 1251 aa13.71□□□□□ -0.21
RPS28-203ENST00000600659 FAM169BQ8N8A8 192 aa13.71□□□□□ -0.21
RPS28-203ENST00000600659 OR4K5Q8NGD3 323 aa13.71□□□□□ -0.21
RPS28-203ENST00000600659 OR51A7Q8NH64 312 aa13.71□□□□□ -0.21
RPS28-203ENST00000600659 ZNF519Q8TB69 540 aa13.71□□□□□ -0.21
RPS28-203ENST00000600659 PIGTQ969N2 578 aa13.71□□□□□ -0.21
RPS28-203ENST00000600659 FAM46AQ96IP4 442 aaKnown RBP13.71□□□□□ -0.21
RPS28-203ENST00000600659 TNFRSF13CQ96RJ3 184 aa13.71□□□□□ -0.21
RPS28-203ENST00000600659 KCNK17Q96T54 332 aa13.71□□□□□ -0.21
RPS28-203ENST00000600659 FOXB1Q99853 325 aa13.71□□□□□ -0.21
RPS28-203ENST00000600659 TXNIPQ9H3M7 391 aa13.71□□□□□ -0.21
RPS28-203ENST00000600659 MGAT4BQ9UQ53 548 aa13.71□□□□□ -0.21
RPS28-203ENST00000600659 A0A1W2PRG6 482 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 SH3PXD2BA1X283 911 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 CENPBD1B2RD01 187 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 MCIDASD6RGH6 385 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 ACOT8O14734 319 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 PTP4A3O75365 173 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 WNT11O96014 354 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 IGHG1P01857 330 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 FABP3P05413 133 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 CECR9P0C854 216 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 SAGP10523 405 aaPredicted RBP13.7□□□□□ -0.22
RPS28-203ENST00000600659 PAX1P15863 534 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 ACADSP16219 412 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 CALCRP30988 508 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 SLC9A3P48764 834 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 DAP3P51398 398 aaKnown RBP13.7□□□□□ -0.22
RPS28-203ENST00000600659 UBE2NP61088 152 aaKnown RBP13.7□□□□□ -0.22
RPS28-203ENST00000600659 ADAM8P78325 824 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 C3orf36Q3SXR2 165 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 FGD3Q5JSP0 725 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 ZNF813Q6ZN06 617 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 PIWIL3Q7Z3Z3 882 aaKnown RBP13.7□□□□□ -0.22
RPS28-203ENST00000600659 DTX2Q86UW9 622 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 MDP1Q86V88 176 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 LRRC75A-AS1Q8N1F1 130 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 PIAS4Q8N2W9 510 aaPredicted RBP13.7□□□□□ -0.22
RPS28-203ENST00000600659 CLDN22Q8N7P3 220 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 OR52J3Q8NH60 311 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 FGFBP3Q8TAT2 258 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 HTRA1Q92743 480 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 RADILQ96JH8 1075 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 SLC38A2Q96QD8 506 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 TSPAN32Q96QS1 320 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 GSX2Q9BZM3 304 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms