RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 PAX1P15863 534 aa14.13□□□□□ -0.15
LSM4-206ENST00000600289 MAKP20794 623 aa14.13□□□□□ -0.15
LSM4-206ENST00000600289 CD40P25942 277 aa14.13□□□□□ -0.15
LSM4-206ENST00000600289 MSX2P35548 267 aaPredicted RBP14.13□□□□□ -0.15
LSM4-206ENST00000600289 CSNK1A1P48729 337 aa14.13□□□□□ -0.15
LSM4-206ENST00000600289 DAP3P51398 398 aaKnown RBP14.13□□□□□ -0.15
LSM4-206ENST00000600289 ZNF83P51522 516 aa14.13□□□□□ -0.15
LSM4-206ENST00000600289 LSM11P83369 360 aaKnown RBP eCLIP14.13□□□□□ -0.15
LSM4-206ENST00000600289 ARF1P84077 181 aaKnown RBP14.13□□□□□ -0.15
LSM4-206ENST00000600289 CAMK2DQ13557 499 aa14.13□□□□□ -0.15
LSM4-206ENST00000600289 TAF11Q15544 211 aa14.13□□□□□ -0.15
LSM4-206ENST00000600289 HIST3H3Q16695 136 aa14.13□□□□□ -0.15
LSM4-206ENST00000600289 LCN8Q6JVE9 175 aa14.13□□□□□ -0.15
LSM4-206ENST00000600289 ZNF730Q6ZMV8 503 aa14.13□□□□□ -0.15
LSM4-206ENST00000600289 LRRC75A-AS1Q8N1F1 130 aa14.13□□□□□ -0.15
LSM4-206ENST00000600289 KBTBD8Q8NFY9 601 aa14.13□□□□□ -0.15
LSM4-206ENST00000600289 OR6N1Q8NGY5 312 aa14.13□□□□□ -0.15
LSM4-206ENST00000600289 ASB10Q8WXI3 467 aa14.13□□□□□ -0.15
LSM4-206ENST00000600289 AKAP1Q92667 903 aaKnown RBP eCLIP14.13□□□□□ -0.15
LSM4-206ENST00000600289 ZNF566Q969W8 418 aa14.13□□□□□ -0.15
LSM4-206ENST00000600289 ZNF837Q96EG3 531 aaPredicted RBP14.13□□□□□ -0.15
LSM4-206ENST00000600289 FUZQ9BT04 418 aa14.13□□□□□ -0.15
LSM4-206ENST00000600289 ULBP2Q9BZM5 246 aa14.13□□□□□ -0.15
LSM4-206ENST00000600289 HEATR1Q9H583 2144 aaKnown RBP14.13□□□□□ -0.15
LSM4-206ENST00000600289 INIPQ9NRY2 104 aa14.13□□□□□ -0.15
LSM4-206ENST00000600289 TAS2R1Q9NYW7 299 aa14.13□□□□□ -0.15
LSM4-206ENST00000600289 A0A1W2PR80 420 aa14.12□□□□□ -0.15
LSM4-206ENST00000600289 hCG_2039718K7EN88 272 aa14.12□□□□□ -0.15
LSM4-206ENST00000600289 ABCD4O14678 606 aa14.12□□□□□ -0.15
LSM4-206ENST00000600289 CLOCKO15516 846 aa14.12□□□□□ -0.15
LSM4-206ENST00000600289 SERPINI2O75830 405 aa14.12□□□□□ -0.15
LSM4-206ENST00000600289 BCL10O95999 233 aa14.12□□□□□ -0.15
LSM4-206ENST00000600289 CDH2P19022 906 aaPredicted RBP14.12□□□□□ -0.15
LSM4-206ENST00000600289 AQP2P41181 271 aa14.12□□□□□ -0.15
LSM4-206ENST00000600289 ZNF133P52736 654 aaPredicted RBP14.12□□□□□ -0.15
LSM4-206ENST00000600289 UBE2NP61088 152 aaKnown RBP14.12□□□□□ -0.15
LSM4-206ENST00000600289 ADAM8P78325 824 aa14.12□□□□□ -0.15
LSM4-206ENST00000600289 FHL1Q13642 323 aa14.12□□□□□ -0.15
LSM4-206ENST00000600289 TRIM25Q14258 630 aaKnown RBP14.12□□□□□ -0.15
LSM4-206ENST00000600289 ARMC4Q5T2S8 1044 aa14.12□□□□□ -0.15
LSM4-206ENST00000600289 CARD17Q5XLA6 110 aa14.12□□□□□ -0.15
LSM4-206ENST00000600289 PIWIL3Q7Z3Z3 882 aaKnown RBP14.12□□□□□ -0.15
LSM4-206ENST00000600289 CDK20Q8IZL9 346 aa14.12□□□□□ -0.15
LSM4-206ENST00000600289 MOSPD2Q8NHP6 518 aa14.12□□□□□ -0.15
LSM4-206ENST00000600289 FBXW5Q969U6 566 aa14.12□□□□□ -0.15
LSM4-206ENST00000600289 MCUR1Q96AQ8 359 aa14.12□□□□□ -0.15
LSM4-206ENST00000600289 CCL19Q99731 98 aa14.12□□□□□ -0.15
LSM4-206ENST00000600289 MRPL13Q9BYD1 178 aaKnown RBP14.12□□□□□ -0.15
LSM4-206ENST00000600289 IL1RAPQ9NPH3 570 aa14.12□□□□□ -0.15
LSM4-206ENST00000600289 GLTPQ9NZD2 209 aa14.12□□□□□ -0.15
LSM4-206ENST00000600289 CADP27708 2225 aa14.11□□□□□ -0.15
LSM4-206ENST00000600289 EFCAB9A8MZ26 197 aa14.11□□□□□ -0.15
LSM4-206ENST00000600289 M0R1B8 84 aa14.11□□□□□ -0.15
LSM4-206ENST00000600289 IGKV3-15P01624 115 aa14.11□□□□□ -0.15
LSM4-206ENST00000600289 IGLV1-44P01699 117 aa14.11□□□□□ -0.15
LSM4-206ENST00000600289 IGHG1P01857 330 aa14.11□□□□□ -0.15
LSM4-206ENST00000600289 F13BP05160 661 aa14.11□□□□□ -0.15
LSM4-206ENST00000600289 FABP3P05413 133 aa14.11□□□□□ -0.15
LSM4-206ENST00000600289 DANCRP0C864 163 aa14.11□□□□□ -0.15
LSM4-206ENST00000600289 SAGP10523 405 aaPredicted RBP14.11□□□□□ -0.15
LSM4-206ENST00000600289 ATP6V1B2P21281 511 aa14.11□□□□□ -0.15
LSM4-206ENST00000600289 LIMS1P48059 325 aa14.11□□□□□ -0.15
LSM4-206ENST00000600289 SMIM11AP58511 58 aa14.11□□□□□ -0.15
LSM4-206ENST00000600289 MELKQ14680 651 aa14.11□□□□□ -0.15
LSM4-206ENST00000600289 NRN1LQ496H8 165 aa14.11□□□□□ -0.15
LSM4-206ENST00000600289 ALG10Q5BKT4 473 aa14.11□□□□□ -0.15
LSM4-206ENST00000600289 PODNL1Q6PEZ8 512 aa14.11□□□□□ -0.15
LSM4-206ENST00000600289 RRM2BQ7LG56 351 aa14.11□□□□□ -0.15
LSM4-206ENST00000600289 ALPK2Q86TB3 2170 aa14.11□□□□□ -0.15
LSM4-206ENST00000600289 LRRC75AQ8NAA5 344 aa14.11□□□□□ -0.15
LSM4-206ENST00000600289 NOXO1Q8NFA2 376 aa14.11□□□□□ -0.15
LSM4-206ENST00000600289 ASB9Q96DX5 294 aa14.11□□□□□ -0.15
LSM4-206ENST00000600289 ZNF347Q96SE7 839 aa14.11□□□□□ -0.15
LSM4-206ENST00000600289 TXNIPQ9H3M7 391 aa14.11□□□□□ -0.15
LSM4-206ENST00000600289 A0A096LPE4 126 aa14.1□□□□□ -0.15
LSM4-206ENST00000600289 A0A1W2PPZ6 126 aa14.1□□□□□ -0.15
LSM4-206ENST00000600289 TCRBV5S2A0A599 114 aa14.1□□□□□ -0.15
LSM4-206ENST00000600289 UBOX5O94941 541 aa14.1□□□□□ -0.15
LSM4-206ENST00000600289 MAGEA2P43356 314 aa14.1□□□□□ -0.15
LSM4-206ENST00000600289 FAM205BPQ63HN1 556 aa14.1□□□□□ -0.15
LSM4-206ENST00000600289 TBPL2Q6SJ96 375 aa14.1□□□□□ -0.15
LSM4-206ENST00000600289 OAFQ86UD1 273 aa14.1□□□□□ -0.15
LSM4-206ENST00000600289 DHFR2Q86XF0 187 aa14.1□□□□□ -0.15
LSM4-206ENST00000600289 SLC38A2Q96QD8 506 aa14.1□□□□□ -0.15
LSM4-206ENST00000600289 FOXB1Q99853 325 aa14.1□□□□□ -0.15
LSM4-206ENST00000600289 GRIP2Q9C0E4 1043 aa14.1□□□□□ -0.15
LSM4-206ENST00000600289 DENND2DQ9H6A0 471 aaPredicted RBP14.1□□□□□ -0.15
LSM4-206ENST00000600289 MAGIXQ9H6Y5 334 aa14.1□□□□□ -0.15
LSM4-206ENST00000600289 SMURF2Q9HAU4 748 aa14.1□□□□□ -0.15
LSM4-206ENST00000600289 KRCC1Q9NPI7 259 aaPredicted RBP14.1□□□□□ -0.15
LSM4-206ENST00000600289 POFUT2Q9Y2G5 429 aa14.1□□□□□ -0.15
LSM4-206ENST00000600289 V9GYQ6 96 aa14.1□□□□□ -0.15
LSM4-206ENST00000600289 PLCE1Q9P212 2302 aa14.09□□□□□ -0.15
LSM4-206ENST00000600289 IGHV1-18A0A0C4DH31 117 aa14.09□□□□□ -0.15
LSM4-206ENST00000600289 SH3PXD2BA1X283 911 aa14.09□□□□□ -0.15
LSM4-206ENST00000600289 MCIDASD6RGH6 385 aa14.09□□□□□ -0.15
LSM4-206ENST00000600289 CDC42EP2O14613 210 aa14.09□□□□□ -0.15
LSM4-206ENST00000600289 MGRN1O60291 552 aa14.09□□□□□ -0.15
LSM4-206ENST00000600289 ENTPD5O75356 428 aa14.09□□□□□ -0.15
LSM4-206ENST00000600289 NR2C1P13056 603 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms