RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 MAD2L1BPQ15013 274 aaPredicted RBP18.14■□□□□ 0.49
PNKP-212ENST00000599454 RANBP3LQ86VV4 465 aaPredicted RBP18.14■□□□□ 0.49
PNKP-212ENST00000599454 LRP11Q86VZ4 500 aa18.14■□□□□ 0.49
PNKP-212ENST00000599454 CARM1Q86X55 608 aa18.14■□□□□ 0.49
PNKP-212ENST00000599454 C10orf53Q8N6V4 93 aa18.14■□□□□ 0.49
PNKP-212ENST00000599454 YIPF5Q969M3 257 aa18.14■□□□□ 0.49
PNKP-212ENST00000599454 LRRC37BQ96QE4 947 aa18.14■□□□□ 0.49
PNKP-212ENST00000599454 PARD6BQ9BYG5 372 aa18.14■□□□□ 0.49
PNKP-212ENST00000599454 SLC25A37Q9NYZ2 338 aa18.14■□□□□ 0.49
PNKP-212ENST00000599454 TREM2Q9NZC2 230 aa18.14■□□□□ 0.49
PNKP-212ENST00000599454 MYEF2Q9P2K5 600 aaKnown RBP18.14■□□□□ 0.49
PNKP-212ENST00000599454 DUSP13Q9UII6 198 aa18.14■□□□□ 0.49
PNKP-212ENST00000599454 SERPINB7O75635 380 aa18.13■□□□□ 0.49
PNKP-212ENST00000599454 ANPEPP15144 967 aa18.13■□□□□ 0.49
PNKP-212ENST00000599454 AHCYP23526 432 aa18.13■□□□□ 0.49
PNKP-212ENST00000599454 MYBPC1Q00872 1141 aa18.13■□□□□ 0.49
PNKP-212ENST00000599454 GLIPR1L2Q4G1C9 344 aa18.13■□□□□ 0.49
PNKP-212ENST00000599454 RGS7BPQ6MZT1 257 aaPredicted RBP18.13■□□□□ 0.49
PNKP-212ENST00000599454 USP43Q70EL4 1123 aa18.13■□□□□ 0.49
PNKP-212ENST00000599454 OR5J2Q8NH18 312 aa18.13■□□□□ 0.49
PNKP-212ENST00000599454 TMEM38AQ9H6F2 299 aa18.13■□□□□ 0.49
PNKP-212ENST00000599454 LPAR2Q9HBW0 351 aa18.13■□□□□ 0.49
PNKP-212ENST00000599454 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.13■□□□□ 0.49
PNKP-212ENST00000599454 CORO2BQ9UQ03 480 aa18.13■□□□□ 0.49
PNKP-212ENST00000599454 V9GYY5 206 aaPredicted RBP18.13■□□□□ 0.49
PNKP-212ENST00000599454 RP2O75695 350 aa18.12■□□□□ 0.49
PNKP-212ENST00000599454 NCR1O76036 304 aa18.12■□□□□ 0.49
PNKP-212ENST00000599454 OR6A2O95222 327 aa18.12■□□□□ 0.49
PNKP-212ENST00000599454 PNPP00491 289 aa18.12■□□□□ 0.49
PNKP-212ENST00000599454 NAT2P11245 290 aa18.12■□□□□ 0.49
PNKP-212ENST00000599454 SLC6A2P23975 617 aa18.12■□□□□ 0.49
PNKP-212ENST00000599454 BIDP55957 195 aa18.12■□□□□ 0.49
PNKP-212ENST00000599454 LMO4P61968 165 aa18.12■□□□□ 0.49
PNKP-212ENST00000599454 ACTG1P63261 375 aa18.12■□□□□ 0.49
PNKP-212ENST00000599454 SCARB2Q14108 478 aa18.12■□□□□ 0.49
PNKP-212ENST00000599454 DPPA2Q7Z7J5 298 aa18.12■□□□□ 0.49
PNKP-212ENST00000599454 ZNF584Q8IVC4 421 aa18.12■□□□□ 0.49
PNKP-212ENST00000599454 WDFY1Q8IWB7 410 aa18.12■□□□□ 0.49
PNKP-212ENST00000599454 SKA3Q8IX90 412 aa18.12■□□□□ 0.49
PNKP-212ENST00000599454 MSRB3Q8IXL7 192 aa18.12■□□□□ 0.49
PNKP-212ENST00000599454 OR6X1Q8NH79 312 aa18.12■□□□□ 0.49
PNKP-212ENST00000599454 FAM216AQ8WUB2 273 aa18.12■□□□□ 0.49
PNKP-212ENST00000599454 TMEM54Q969K7 222 aa18.12■□□□□ 0.49
PNKP-212ENST00000599454 JMJD8Q96S16 334 aa18.12■□□□□ 0.49
PNKP-212ENST00000599454 C1orf198Q9H425 327 aa18.12■□□□□ 0.49
PNKP-212ENST00000599454 NKIRAS1Q9NYS0 192 aa18.12■□□□□ 0.49
PNKP-212ENST00000599454 GLTPQ9NZD2 209 aa18.12■□□□□ 0.49
PNKP-212ENST00000599454 FZR1Q9UM11 496 aa18.12■□□□□ 0.49
PNKP-212ENST00000599454 PCDHB10Q9UN67 800 aa18.12■□□□□ 0.49
PNKP-212ENST00000599454 TRIM77I1YAP6 450 aa18.11■□□□□ 0.49
PNKP-212ENST00000599454 WNT9BO14905 357 aa18.11■□□□□ 0.49
PNKP-212ENST00000599454 FMO6PO60774 539 aa18.11■□□□□ 0.49
PNKP-212ENST00000599454 ADORA3P0DMS8 318 aa18.11■□□□□ 0.49
PNKP-212ENST00000599454 OR8G3PP0DMU2 310 aa18.11■□□□□ 0.49
PNKP-212ENST00000599454 CDH12P55289 794 aa18.11■□□□□ 0.49
PNKP-212ENST00000599454 HILS1P60008 231 aa18.11■□□□□ 0.49
PNKP-212ENST00000599454 NKPD1Q17RQ9 610 aa18.11■□□□□ 0.49
PNKP-212ENST00000599454 PCGF3Q3KNV8 242 aa18.11■□□□□ 0.49
PNKP-212ENST00000599454 ZNF613Q6PF04 617 aa18.11■□□□□ 0.49
PNKP-212ENST00000599454 BLOC1S3Q6QNY0 202 aa18.11■□□□□ 0.49
PNKP-212ENST00000599454 EPGNQ6UW88 154 aa18.11■□□□□ 0.49
PNKP-212ENST00000599454 ARMC8Q8IUR7 673 aa18.11■□□□□ 0.49
PNKP-212ENST00000599454 SLC22A24Q8N4F4 322 aa18.11■□□□□ 0.49
PNKP-212ENST00000599454 USH1CQ9Y6N9 552 aa18.11■□□□□ 0.49
PNKP-212ENST00000599454 IGLV3-9A0A075B6K5 115 aa18.1■□□□□ 0.49
PNKP-212ENST00000599454 TMEM89A2RUT3 159 aa18.1■□□□□ 0.49
PNKP-212ENST00000599454 C17orf100A8MU93 164 aa18.1■□□□□ 0.49
PNKP-212ENST00000599454 LRRN3E7EW58 273 aa18.1■□□□□ 0.49
PNKP-212ENST00000599454 SPRY1O43609 319 aaPredicted RBP18.1■□□□□ 0.49
PNKP-212ENST00000599454 TPST2O60704 377 aa18.1■□□□□ 0.49
PNKP-212ENST00000599454 SERPINI2O75830 405 aa18.1■□□□□ 0.49
PNKP-212ENST00000599454 FARS2O95363 451 aaKnown RBP18.1■□□□□ 0.49
PNKP-212ENST00000599454 GPX2P18283 190 aa18.1■□□□□ 0.49
PNKP-212ENST00000599454 TEKQ02763 1124 aa18.1■□□□□ 0.49
PNKP-212ENST00000599454 TMEM53Q6P2H8 277 aa18.1■□□□□ 0.49
PNKP-212ENST00000599454 FAHD2BQ6P2I3 314 aaPredicted RBP18.1■□□□□ 0.49
PNKP-212ENST00000599454 TMEM154Q6P9G4 183 aa18.1■□□□□ 0.49
PNKP-212ENST00000599454 LINC00114Q6XXX2 140 aa18.1■□□□□ 0.49
PNKP-212ENST00000599454 C10orf111Q8N326 155 aa18.1■□□□□ 0.49
PNKP-212ENST00000599454 HIPK4Q8NE63 616 aa18.1■□□□□ 0.49
PNKP-212ENST00000599454 SLC30A7Q8NEW0 376 aa18.1■□□□□ 0.49
PNKP-212ENST00000599454 SNX33Q8WV41 574 aa18.1■□□□□ 0.49
PNKP-212ENST00000599454 ZNF566Q969W8 418 aa18.1■□□□□ 0.49
PNKP-212ENST00000599454 RAB39BQ96DA2 213 aa18.1■□□□□ 0.49
PNKP-212ENST00000599454 SPDL1Q96EA4 605 aa18.1■□□□□ 0.49
PNKP-212ENST00000599454 FAHD2AQ96GK7 314 aa18.1■□□□□ 0.49
PNKP-212ENST00000599454 RBM4Q9BWF3 364 aaKnown RBP18.1■□□□□ 0.49
PNKP-212ENST00000599454 SLC52A3Q9NQ40 469 aa18.1■□□□□ 0.49
PNKP-212ENST00000599454 HINT3Q9NQE9 182 aaKnown RBP18.1■□□□□ 0.49
PNKP-212ENST00000599454 TMEM38BQ9NVV0 291 aa18.1■□□□□ 0.49
PNKP-212ENST00000599454 SLCO1C1Q9NYB5 712 aa18.1■□□□□ 0.49
PNKP-212ENST00000599454 NKIRAS2Q9NYR9 191 aa18.1■□□□□ 0.49
PNKP-212ENST00000599454 VAPAQ9P0L0 249 aa18.1■□□□□ 0.49
PNKP-212ENST00000599454 TAAR3PQ9P1P4 343 aa18.1■□□□□ 0.49
PNKP-212ENST00000599454 RAB21Q9UL25 225 aa18.1■□□□□ 0.49
PNKP-212ENST00000599454 MGAM2Q2M2H8 2515 aa18.09■□□□□ 0.49
PNKP-212ENST00000599454 EVPLLA8MZ36 301 aa18.09■□□□□ 0.49
PNKP-212ENST00000599454 C11orf98E9PRG8 122 aa18.09■□□□□ 0.49
PNKP-212ENST00000599454 CHP2O43745 196 aa18.09■□□□□ 0.49
PNKP-212ENST00000599454 PTHP01270 115 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms