RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 TMCC3Q9ULS5 477 aa12.19□□□□□ -0.46
SHKBP1-218ENST00000598907 AP4B1Q9Y6B7 739 aa12.19□□□□□ -0.46
SHKBP1-218ENST00000598907 ZC3H12DA2A288 527 aaKnown RBP12.18□□□□□ -0.46
SHKBP1-218ENST00000598907 SS18L1O75177 396 aaPredicted RBP12.18□□□□□ -0.46
SHKBP1-218ENST00000598907 CCNB2O95067 398 aa12.18□□□□□ -0.46
SHKBP1-218ENST00000598907 EIF1AXP47813 144 aaKnown RBP12.18□□□□□ -0.46
SHKBP1-218ENST00000598907 COMPP49747 757 aaPredicted RBP12.18□□□□□ -0.46
SHKBP1-218ENST00000598907 RPS3AP61247 264 aaKnown RBP12.18□□□□□ -0.46
SHKBP1-218ENST00000598907 PRKCDQ05655 676 aa12.18□□□□□ -0.46
SHKBP1-218ENST00000598907 C11orf71Q6IPW1 123 aa12.18□□□□□ -0.46
SHKBP1-218ENST00000598907 C3orf33Q6P1S2 294 aa12.18□□□□□ -0.46
SHKBP1-218ENST00000598907 C1orf94Q6P1W5 598 aa12.18□□□□□ -0.46
SHKBP1-218ENST00000598907 C5orf46Q6UWT4 87 aa12.18□□□□□ -0.46
SHKBP1-218ENST00000598907 EPHX4Q8IUS5 362 aa12.18□□□□□ -0.46
SHKBP1-218ENST00000598907 OR4K5Q8NGD3 323 aa12.18□□□□□ -0.46
SHKBP1-218ENST00000598907 OR6S1Q8NH40 331 aa12.18□□□□□ -0.46
SHKBP1-218ENST00000598907 RNF217Q8TC41 542 aa12.18□□□□□ -0.46
SHKBP1-218ENST00000598907 GIPC3Q8TF64 312 aa12.18□□□□□ -0.46
SHKBP1-218ENST00000598907 SLC25A43Q8WUT9 341 aaPredicted RBP12.18□□□□□ -0.46
SHKBP1-218ENST00000598907 GMPPAQ96IJ6 420 aaPredicted RBP12.18□□□□□ -0.46
SHKBP1-218ENST00000598907 PTDSS2Q9BVG9 487 aa12.18□□□□□ -0.46
SHKBP1-218ENST00000598907 GABARAPL1Q9H0R8 117 aa12.18□□□□□ -0.46
SHKBP1-218ENST00000598907 OAZ3Q9UMX2 235 aa12.18□□□□□ -0.46
SHKBP1-218ENST00000598907 MED31Q9Y3C7 131 aa12.18□□□□□ -0.46
SHKBP1-218ENST00000598907 SPIN1Q9Y657 262 aaPredicted RBP12.18□□□□□ -0.46
SHKBP1-218ENST00000598907 CADP27708 2225 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 NBEAL2Q6ZNJ1 2754 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 IGHV4-61A0A0C4DH41 118 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 G3V2T6 193 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 ABCD4O14678 606 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 PIP5K1CO60331 668 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 E2F6O75461 281 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 CSF3P09919 207 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 CCNA2P20248 432 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 CBLP22681 906 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 SHC1P29353 583 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 OMPP47874 163 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 ARHGDIAP52565 204 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 LAPTM4AQ15012 233 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 SYT14P1Q58G82 188 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 OGFRL1Q5TC84 451 aaPredicted RBP12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 PGBD2Q6P3X8 592 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 FAHD1Q6P587 224 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 SEZ6L2Q6UXD5 910 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 ZNF730Q6ZMV8 503 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 TMPRSS11FQ6ZWK6 438 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 ZER1Q7Z7L7 766 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 GGNQ86UU5 652 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 ZDHHC13Q8IUH4 622 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 NRMQ8IXM6 262 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 HS3ST5Q8IZT8 346 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 ICA1LQ8NDH6 482 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 PFN4Q8NHR9 129 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 LIPHQ8WWY8 451 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 TAAR8Q969N4 342 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 DDIT4LQ96D03 193 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 KTI12Q96EK9 354 aaPredicted RBP12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 SOX7Q9BT81 388 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 OR11A1Q9GZK7 315 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 CBLN4Q9NTU7 201 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 C20orf141Q9NUB4 165 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 PDP1Q9P0J1 537 aaPredicted RBP12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 STOML1Q9UBI4 398 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 ZNF281Q9Y2X9 895 aa12.17□□□□□ -0.46
SHKBP1-218ENST00000598907 TRAV36DV7A0A075B6V5 113 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 SAC3D1A6NKF1 404 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 FTCDNL1E5RQL4 147 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 EIF1AYO14602 144 aaKnown RBP12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 TMPRSS2O15393 492 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 GASTP01350 101 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 BGLAPP02818 100 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 IMPDH2P12268 514 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 ZNF23P17027 643 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 PRKACGP22612 351 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 TTKP33981 857 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 STK11Q15831 433 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 C1orf140Q5VVS0 124 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 RRM2BQ7LG56 351 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 SLC46A3Q7Z3Q1 461 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 PIAS4Q8N2W9 510 aaPredicted RBP12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 OR10G2Q8NGC3 310 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 OR9Q2Q8NGE9 314 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 ZFAND2BQ8WV99 257 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 NRG4Q8WWG1 115 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 ADGRG7Q96K78 797 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 ARL5BQ96KC2 179 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 FEVQ99581 238 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 GPA33Q99795 319 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 CIB1Q99828 191 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 PIMREGQ9BSJ6 248 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 C9orf16Q9BUW7 83 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 OSBPL10Q9BXB5 764 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 DGCR6LQ9BY27 220 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 POU2F3Q9UKI9 436 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 MGAT4BQ9UQ53 548 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 HDGFL3Q9Y3E1 203 aa12.16□□□□□ -0.46
SHKBP1-218ENST00000598907 A0A0J9YW62 118 aa12.15□□□□□ -0.46
SHKBP1-218ENST00000598907 TMEM89A2RUT3 159 aa12.15□□□□□ -0.46
SHKBP1-218ENST00000598907 GJE1A6NN92 205 aa12.15□□□□□ -0.46
SHKBP1-218ENST00000598907 FAM157AC9JC47 383 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms