RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 ZNF611Q8N823 705 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 OR13C2Q8NGS9 318 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 OR52J3Q8NH60 311 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 OR51A7Q8NH64 312 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 ASB10Q8WXI3 467 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 PIGTQ969N2 578 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 FBXW5Q969U6 566 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 CLPTM1LQ96KA5 538 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 ALPK1Q96QP1 1244 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 TNFRSF13CQ96RJ3 184 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 CXXC4Q9H2H0 198 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 IL1RAPQ9NPH3 570 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 TMEM5Q9Y2B1 443 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 ARID1AO14497 2285 aa12.1□□□□□ -0.47
UPF1-205ENST00000598209 NPIPB13A6NJU9 1138 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 NPIPB4C9JG80 1138 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 CDC42EP2O14613 210 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 TRMUO75648 421 aaKnown RBP12.09□□□□□ -0.47
UPF1-205ENST00000598209 GADD45GO95257 159 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 ACADSP16219 412 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 PAX7P23759 505 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 CDH11P55287 796 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 CLRN1P58418 232 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 SMIM11AP58511 58 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 MS4A2Q01362 244 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 RUNX1T1Q06455 604 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 TOP3AQ13472 1001 aaPredicted RBP12.09□□□□□ -0.47
UPF1-205ENST00000598209 FHL1Q13642 323 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 SEC23BQ15437 767 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 ANKDD1AQ495B1 522 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 ARMC4Q5T2S8 1044 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 LCN8Q6JVE9 175 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 LRFN4Q6PJG9 635 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 SLC22A25Q6T423 547 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 ZNF813Q6ZN06 617 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 ZNF627Q7L945 461 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 IGFN1Q86VF2 1251 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 ZDHHC21Q8IVQ6 265 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 LRRC75AQ8NAA5 344 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 NOXO1Q8NFA2 376 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 CCDC124Q96CT7 223 aaKnown RBP12.09□□□□□ -0.47
UPF1-205ENST00000598209 FAM46AQ96IP4 442 aaKnown RBP12.09□□□□□ -0.47
UPF1-205ENST00000598209 RADILQ96JH8 1075 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 SEPHS2Q99611 448 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 FOXB1Q99853 325 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 THTPAQ9BU02 230 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 TXNIPQ9H3M7 391 aa12.09□□□□□ -0.47
UPF1-205ENST00000598209 STX18Q9P2W9 335 aaKnown RBP12.09□□□□□ -0.47
UPF1-205ENST00000598209 IGHV1-18A0A0C4DH31 117 aa12.08□□□□□ -0.48
UPF1-205ENST00000598209 TCRBV5S2A0A599 114 aa12.08□□□□□ -0.48
UPF1-205ENST00000598209 SH3PXD2BA1X283 911 aa12.08□□□□□ -0.48
UPF1-205ENST00000598209 CENPBD1B2RD01 187 aa12.08□□□□□ -0.48
UPF1-205ENST00000598209 GYG2O15488 501 aa12.08□□□□□ -0.48
UPF1-205ENST00000598209 IGHMP01871 453 aa12.08□□□□□ -0.48
UPF1-205ENST00000598209 QDPRP09417 244 aa12.08□□□□□ -0.48
UPF1-205ENST00000598209 B4GALT1P15291 398 aa12.08□□□□□ -0.48
UPF1-205ENST00000598209 CAPZA2P47755 286 aa12.08□□□□□ -0.48
UPF1-205ENST00000598209 OMPP47874 163 aa12.08□□□□□ -0.48
UPF1-205ENST00000598209 CTXN1P60606 82 aa12.08□□□□□ -0.48
UPF1-205ENST00000598209 MYBPC1Q00872 1141 aa12.08□□□□□ -0.48
UPF1-205ENST00000598209 TAF11Q15544 211 aa12.08□□□□□ -0.48
UPF1-205ENST00000598209 ZBED5Q49AG3 693 aa12.08□□□□□ -0.48
UPF1-205ENST00000598209 DNAL1Q4LDG9 190 aa12.08□□□□□ -0.48
UPF1-205ENST00000598209 SPNS3Q6ZMD2 512 aa12.08□□□□□ -0.48
UPF1-205ENST00000598209 LURAP1LQ8IV03 231 aa12.08□□□□□ -0.48
UPF1-205ENST00000598209 CCDC36Q8IYA8 594 aa12.08□□□□□ -0.48
UPF1-205ENST00000598209 DEPDC4Q8N2C3 294 aa12.08□□□□□ -0.48
UPF1-205ENST00000598209 SYT14Q8NB59 555 aa12.08□□□□□ -0.48
UPF1-205ENST00000598209 OR4K5Q8NGD3 323 aa12.08□□□□□ -0.48
UPF1-205ENST00000598209 TMEM171Q8WVE6 324 aa12.08□□□□□ -0.48
UPF1-205ENST00000598209 ASB9Q96DX5 294 aa12.08□□□□□ -0.48
UPF1-205ENST00000598209 SLC38A2Q96QD8 506 aa12.08□□□□□ -0.48
UPF1-205ENST00000598209 ZNF347Q96SE7 839 aa12.08□□□□□ -0.48
UPF1-205ENST00000598209 FUZQ9BT04 418 aa12.08□□□□□ -0.48
UPF1-205ENST00000598209 MRPL13Q9BYD1 178 aaKnown RBP12.08□□□□□ -0.48
UPF1-205ENST00000598209 MOV10Q9HCE1 1003 aaKnown RBP12.08□□□□□ -0.48
UPF1-205ENST00000598209 KRCC1Q9NPI7 259 aaPredicted RBP12.08□□□□□ -0.48
UPF1-205ENST00000598209 CISD1Q9NZ45 108 aaKnown RBP12.08□□□□□ -0.48
UPF1-205ENST00000598209 CRNNQ9UBG3 495 aaPredicted RBP12.08□□□□□ -0.48
UPF1-205ENST00000598209 POU2F3Q9UKI9 436 aa12.08□□□□□ -0.48
UPF1-205ENST00000598209 ZNF503-AS2A6NEH8 195 aa12.07□□□□□ -0.48
UPF1-205ENST00000598209 DHHO43323 396 aa12.07□□□□□ -0.48
UPF1-205ENST00000598209 SMPD2O60906 423 aa12.07□□□□□ -0.48
UPF1-205ENST00000598209 STAMBPO95630 424 aa12.07□□□□□ -0.48
UPF1-205ENST00000598209 CBR1P16152 277 aa12.07□□□□□ -0.48
UPF1-205ENST00000598209 RRM2P31350 389 aa12.07□□□□□ -0.48
UPF1-205ENST00000598209 LIMS1P48059 325 aa12.07□□□□□ -0.48
UPF1-205ENST00000598209 RPL27P61353 136 aaKnown RBP12.07□□□□□ -0.48
UPF1-205ENST00000598209 HIST3H3Q16695 136 aa12.07□□□□□ -0.48
UPF1-205ENST00000598209 C3orf36Q3SXR2 165 aa12.07□□□□□ -0.48
UPF1-205ENST00000598209 PIWIL3Q7Z3Z3 882 aaKnown RBP12.07□□□□□ -0.48
UPF1-205ENST00000598209 FAM169BQ8N8A8 192 aa12.07□□□□□ -0.48
UPF1-205ENST00000598209 SMAP2Q8WU79 429 aaPredicted RBP12.07□□□□□ -0.48
UPF1-205ENST00000598209 IGFBPL1Q8WX77 278 aa12.07□□□□□ -0.48
UPF1-205ENST00000598209 HDAC2Q92769 488 aaKnown RBP12.07□□□□□ -0.48
UPF1-205ENST00000598209 MCHR2Q969V1 340 aa12.07□□□□□ -0.48
UPF1-205ENST00000598209 SLC7A6OSQ96CW6 309 aaPredicted RBP12.07□□□□□ -0.48
UPF1-205ENST00000598209 LRGUKQ96M69 825 aa12.07□□□□□ -0.48
UPF1-205ENST00000598209 MAGIXQ9H6Y5 334 aa12.07□□□□□ -0.48
UPF1-205ENST00000598209 ZNF346Q9UL40 294 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms