RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 M0R233 179 aa10.77□□□□□ -0.69
TRIM28-212ENST00000597995 TRAF3IP2O43734 574 aaPredicted RBP10.77□□□□□ -0.69
TRIM28-212ENST00000597995 TROVE2P10155 538 aaKnown RBP eCLIP10.77□□□□□ -0.69
TRIM28-212ENST00000597995 HLA-DOBP13765 273 aa10.77□□□□□ -0.69
TRIM28-212ENST00000597995 CFPP27918 469 aa10.77□□□□□ -0.69
TRIM28-212ENST00000597995 GLRXP35754 106 aa10.77□□□□□ -0.69
TRIM28-212ENST00000597995 IL1RL1Q01638 556 aa10.77□□□□□ -0.69
TRIM28-212ENST00000597995 SCGB2A2Q13296 93 aa10.77□□□□□ -0.69
TRIM28-212ENST00000597995 VMACQ2NL98 169 aa10.77□□□□□ -0.69
TRIM28-212ENST00000597995 ELFN2Q5R3F8 820 aa10.77□□□□□ -0.69
TRIM28-212ENST00000597995 PHYHD1Q5SRE7 291 aa10.77□□□□□ -0.69
TRIM28-212ENST00000597995 REP15Q6BDI9 236 aa10.77□□□□□ -0.69
TRIM28-212ENST00000597995 KRT80Q6KB66 452 aa10.77□□□□□ -0.69
TRIM28-212ENST00000597995 H1FNTQ75WM6 255 aaPredicted RBP10.77□□□□□ -0.69
TRIM28-212ENST00000597995 CCDC80Q76M96 950 aa10.77□□□□□ -0.69
TRIM28-212ENST00000597995 ZNF627Q7L945 461 aa10.77□□□□□ -0.69
TRIM28-212ENST00000597995 TMEM123Q8N131 208 aa10.77□□□□□ -0.69
TRIM28-212ENST00000597995 ADPRHL1Q8NDY3 354 aa10.77□□□□□ -0.69
TRIM28-212ENST00000597995 OR6S1Q8NH40 331 aa10.77□□□□□ -0.69
TRIM28-212ENST00000597995 LRR1Q96L50 414 aa10.77□□□□□ -0.69
TRIM28-212ENST00000597995 OR2M2Q96R28 347 aa10.77□□□□□ -0.69
TRIM28-212ENST00000597995 MCHR1Q99705 422 aa10.77□□□□□ -0.69
TRIM28-212ENST00000597995 DENND2DQ9H6A0 471 aaPredicted RBP10.77□□□□□ -0.69
TRIM28-212ENST00000597995 CCDC134Q9H6E4 229 aa10.77□□□□□ -0.69
TRIM28-212ENST00000597995 LYNX1G3V0Z9 82 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 FMO6PO60774 539 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 VENTXO95231 258 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 TFP02787 698 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 VIMP08670 466 aaKnown RBP10.76□□□□□ -0.69
TRIM28-212ENST00000597995 LYNX1P0DP58 116 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 ZNF35P13682 527 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 ACHEP22303 614 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 CAPZA2P47755 286 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 COMPP49747 757 aaPredicted RBP10.76□□□□□ -0.69
TRIM28-212ENST00000597995 TMEM33P57088 247 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 NCALDP61601 193 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 MRPS11P82912 194 aaKnown RBP10.76□□□□□ -0.69
TRIM28-212ENST00000597995 CYLC2Q14093 348 aaPredicted RBP10.76□□□□□ -0.69
TRIM28-212ENST00000597995 CCNIQ14094 377 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 MFSD13AQ14CX5 517 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 GSG1Q2KHT4 349 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 COQ5Q5HYK3 327 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 ENTPD8Q5MY95 495 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 ZNF613Q6PF04 617 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 RINLQ6ZS11 566 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 RANBP3LQ86VV4 465 aaPredicted RBP10.76□□□□□ -0.69
TRIM28-212ENST00000597995 SNX32Q86XE0 403 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 C20orf196Q8IYI0 205 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 SEMA6DQ8NFY4 1073 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 CLDND2Q8NHS1 167 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 VANGL1Q8TAA9 524 aaPredicted RBP10.76□□□□□ -0.69
TRIM28-212ENST00000597995 RNF217Q8TC41 542 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 C10orf82Q8WW14 230 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 RDH5Q92781 318 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 TMEM186Q96B77 213 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 TXNDC15Q96J42 360 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 ZNF75AQ96N20 296 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 ZNF583Q96ND8 569 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 TMEM43Q9BTV4 400 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 MRPL37Q9BZE1 423 aaKnown RBP10.76□□□□□ -0.69
TRIM28-212ENST00000597995 PLA2G12AQ9BZM1 189 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 RACGAP1Q9H0H5 632 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 TPK1Q9H3S4 243 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 METTL17Q9H7H0 456 aaPredicted RBP10.76□□□□□ -0.69
TRIM28-212ENST00000597995 EVA1AQ9H8M9 152 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 SLC13A4Q9UKG4 626 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 GRIP1Q9Y3R0 1128 aa10.76□□□□□ -0.69
TRIM28-212ENST00000597995 DYSFO75923 2080 aa10.75□□□□□ -0.69
TRIM28-212ENST00000597995 LOC100653049A0A140TA62 436 aa10.75□□□□□ -0.69
TRIM28-212ENST00000597995 CPSF4LA6NMK7 179 aaKnown RBP10.75□□□□□ -0.69
TRIM28-212ENST00000597995 M0R3G1 203 aa10.75□□□□□ -0.69
TRIM28-212ENST00000597995 MRASO14807 208 aa10.75□□□□□ -0.69
TRIM28-212ENST00000597995 SPRY1O43609 319 aaPredicted RBP10.75□□□□□ -0.69
TRIM28-212ENST00000597995 CHP2O43745 196 aa10.75□□□□□ -0.69
TRIM28-212ENST00000597995 KRT34O76011 436 aa10.75□□□□□ -0.69
TRIM28-212ENST00000597995 HLA-HP01893 362 aa10.75□□□□□ -0.69
TRIM28-212ENST00000597995 MSMBP08118 114 aa10.75□□□□□ -0.69
TRIM28-212ENST00000597995 CD79AP11912 226 aa10.75□□□□□ -0.69
TRIM28-212ENST00000597995 ZNF14P17017 642 aaPredicted RBP10.75□□□□□ -0.69
TRIM28-212ENST00000597995 TNFRSF1BP20333 461 aa10.75□□□□□ -0.69
TRIM28-212ENST00000597995 GPR6P46095 362 aaPredicted RBP10.75□□□□□ -0.69
TRIM28-212ENST00000597995 RPS23P62266 143 aaKnown RBP10.75□□□□□ -0.69
TRIM28-212ENST00000597995 MSMPQ1L6U9 139 aa10.75□□□□□ -0.69
TRIM28-212ENST00000597995 SWT1Q5T5J6 900 aaKnown RBP10.75□□□□□ -0.69
TRIM28-212ENST00000597995 PATL1Q86TB9 770 aaKnown RBP10.75□□□□□ -0.69
TRIM28-212ENST00000597995 SLC30A8Q8IWU4 369 aa10.75□□□□□ -0.69
TRIM28-212ENST00000597995 UEVLDQ8IX04 471 aa10.75□□□□□ -0.69
TRIM28-212ENST00000597995 OR8J3Q8NGG0 315 aa10.75□□□□□ -0.69
TRIM28-212ENST00000597995 ADAMTS16Q8TE57 1224 aa10.75□□□□□ -0.69
TRIM28-212ENST00000597995 MS4A3Q96HJ5 214 aa10.75□□□□□ -0.69
TRIM28-212ENST00000597995 PRSS27Q9BQR3 290 aa10.75□□□□□ -0.69
TRIM28-212ENST00000597995 EMC6Q9BV81 110 aa10.75□□□□□ -0.69
TRIM28-212ENST00000597995 PCDHAC1Q9H158 963 aa10.75□□□□□ -0.69
TRIM28-212ENST00000597995 B3GAT2Q9NPZ5 323 aa10.75□□□□□ -0.69
TRIM28-212ENST00000597995 HIF1ANQ9NWT6 349 aa10.75□□□□□ -0.69
TRIM28-212ENST00000597995 MRPL39Q9NYK5 338 aaKnown RBP10.75□□□□□ -0.69
TRIM28-212ENST00000597995 ARMCX1Q9P291 453 aa10.75□□□□□ -0.69
TRIM28-212ENST00000597995 GMPR2Q9P2T1 348 aaKnown RBP10.75□□□□□ -0.69
TRIM28-212ENST00000597995 CORINQ9Y5Q5 1042 aa10.75□□□□□ -0.69
TRIM28-212ENST00000597995 NOX1Q9Y5S8 564 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms