RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 GABRA1P14867 456 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 ZNF3P17036 446 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 PCSK6P29122 969 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 EPHA2P29317 976 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 SDHAP31040 664 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 GGT2P36268 569 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 GIPRP48546 466 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 P2RY4P51582 365 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 ERVK-25P63136 954 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 ADARB1P78563 741 aaKnown RBP10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 CDK5Q00535 292 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 MYBPC1Q00872 1141 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 RASGEF1BQ0VAM2 473 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 RNPS1Q15287 305 aaKnown RBP10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 POU4F3Q15319 338 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 MS4A18Q3C1V0 323 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 EEF1A1P5Q5VTE0 462 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 TMEM236Q5W0B7 351 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 FAM205BPQ63HN1 556 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 GPR139Q6DWJ6 353 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 GTF2IRD2BQ6EKJ0 949 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 GTF2IRD2Q86UP8 949 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 CD163Q86VB7 1156 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 JAZF1Q86VZ6 243 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 CCDC103Q8IW40 242 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 C8orf59Q8N0T1 100 aaPredicted RBP10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 LNX2Q8N448 690 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 OR4Q3Q8NH05 313 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 FNDC9Q8TBE3 224 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 FAM57AQ8TBR7 257 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 RNF128Q8TEB7 428 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 TFAP2CQ92754 450 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 MBD6Q96DN6 1003 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 HRASLS5Q96KN8 279 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 TRIB1Q96RU8 372 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 FANCFQ9NPI8 374 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 PNPLA3Q9NST1 481 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 KLHL9Q9P2J3 617 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 KCNN3Q9UGI6 736 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 NDRG4Q9ULP0 352 aaKnown RBP10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 IER3IP1Q9Y5U9 82 aa10.71□□□□□ -0.69
SHKBP1-213ENST00000597325 MPDZO75970 2070 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 KIAA1549Q9HCM3 1950 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 TEX13CA0A0J9YWL9 993 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 LOC102725191A0A1B0GVB3 256 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 A6NIZ1 184 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 NPIPB13A6NJU9 1138 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 NPIPB4C9JG80 1138 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 IMPA2O14732 288 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 BCL10O95999 233 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 IGHMP01871 453 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 IFNGR1P15260 489 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 PAICSP22234 425 aaKnown RBP10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 HOXC12P31275 282 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 RAP1BP61224 184 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 RPL27P61353 136 aaKnown RBP10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 RAP1AP62834 184 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 IL5RAQ01344 420 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 KRR1Q13601 381 aaKnown RBP10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 SNAPC1Q16533 368 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 ACKR1Q16570 336 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 ACSF3Q4G176 576 aaPredicted RBP10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 EMC4Q5J8M3 183 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 SLC35F1Q5T1Q4 408 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 ZNF691Q5VV52 312 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 C12orf73Q69YU5 71 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 SLC35D2Q76EJ3 337 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 FGD2Q7Z6J4 655 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 KDM8Q8N371 416 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 LRRC75AQ8NAA5 344 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 OR9K2Q8NGE7 335 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 CA5BP1Q8WTZ4 195 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 TSPAN32Q96QS1 320 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 ANKRD60Q9BZ19 345 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 TXNIPQ9H3M7 391 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 NRIP3Q9NQ35 241 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 TVP23BQ9NYZ1 205 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 B3GAT1Q9P2W7 334 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 CLCF1Q9UBD9 225 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 KLHL21Q9UJP4 597 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 ADAM18Q9Y3Q7 739 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 FREM3P0C091 2139 aa10.7□□□□□ -0.7
SHKBP1-213ENST00000597325 ZNF726A6NNF4 738 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 FAM171A2A8MVW0 826 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 M0R3G1 203 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 GPR171O14626 319 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 ARPC3O15145 178 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 ZNHIT1O43257 154 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 MPZL2O60487 215 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 RAMP1O60894 148 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 CLIC3O95833 236 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 HOXD4P09016 255 aaPredicted RBP10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 HLA-DOBP13765 273 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 ACVR2AP27037 513 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 ACVR1BP36896 505 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 PCYT1AP49585 367 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 SLC16A1P53985 500 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 BIDP55957 195 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 CLDN17P56750 224 aa10.69□□□□□ -0.7
SHKBP1-213ENST00000597325 MELKQ14680 651 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms