RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 SPEF1Q9Y4P9 236 aa15.12■□□□□ 0.01
IRF3-208ENST00000594387 DYNC1I1O14576 645 aa15.11■□□□□ 0.01
IRF3-208ENST00000594387 SEC14L2O76054 403 aa15.11■□□□□ 0.01
IRF3-208ENST00000594387 UBL3O95164 117 aa15.11■□□□□ 0.01
IRF3-208ENST00000594387 RAB36O95755 333 aa15.11■□□□□ 0.01
IRF3-208ENST00000594387 IGKV3-15P01624 115 aa15.11■□□□□ 0.01
IRF3-208ENST00000594387 F13BP05160 661 aa15.11■□□□□ 0.01
IRF3-208ENST00000594387 CECR9P0C854 216 aa15.11■□□□□ 0.01
IRF3-208ENST00000594387 NCK1P16333 377 aa15.11■□□□□ 0.01
IRF3-208ENST00000594387 AQP2P41181 271 aa15.11■□□□□ 0.01
IRF3-208ENST00000594387 MNAT1P51948 309 aa15.11■□□□□ 0.01
IRF3-208ENST00000594387 NUDT6P53370 316 aa15.11■□□□□ 0.01
IRF3-208ENST00000594387 SNRPD2P62316 118 aaKnown RBP15.11■□□□□ 0.01
IRF3-208ENST00000594387 KRT72Q14CN4 511 aa15.11■□□□□ 0.01
IRF3-208ENST00000594387 TAF11Q15544 211 aa15.11■□□□□ 0.01
IRF3-208ENST00000594387 NHLRC1Q6VVB1 395 aa15.11■□□□□ 0.01
IRF3-208ENST00000594387 ZNF730Q6ZMV8 503 aa15.11■□□□□ 0.01
IRF3-208ENST00000594387 RNF113BQ8IZP6 322 aaKnown RBP15.11■□□□□ 0.01
IRF3-208ENST00000594387 OFCC1Q8IZS5 231 aa15.11■□□□□ 0.01
IRF3-208ENST00000594387 LIPHQ8WWY8 451 aa15.11■□□□□ 0.01
IRF3-208ENST00000594387 TMEM54Q969K7 222 aa15.11■□□□□ 0.01
IRF3-208ENST00000594387 FBXO17Q96EF6 278 aa15.11■□□□□ 0.01
IRF3-208ENST00000594387 KCNN2Q9H2S1 579 aa15.11■□□□□ 0.01
IRF3-208ENST00000594387 NELFAQ9H3P2 528 aa15.11■□□□□ 0.01
IRF3-208ENST00000594387 C20orf141Q9NUB4 165 aa15.11■□□□□ 0.01
IRF3-208ENST00000594387 GMPR2Q9P2T1 348 aaKnown RBP15.11■□□□□ 0.01
IRF3-208ENST00000594387 RHCGQ9UBD6 479 aa15.11■□□□□ 0.01
IRF3-208ENST00000594387 EGFL7Q9UHF1 273 aa15.11■□□□□ 0.01
IRF3-208ENST00000594387 TAGLN3Q9UI15 199 aa15.11■□□□□ 0.01
IRF3-208ENST00000594387 FBXO9Q9UK97 447 aaPredicted RBP15.11■□□□□ 0.01
IRF3-208ENST00000594387 TRIM64A6NGJ6 449 aa15.1■□□□□ 0.01
IRF3-208ENST00000594387 TRIM64BA6NI03 449 aa15.1■□□□□ 0.01
IRF3-208ENST00000594387 CENPBD1B2RD01 187 aa15.1■□□□□ 0.01
IRF3-208ENST00000594387 SSX4O60224 188 aa15.1■□□□□ 0.01
IRF3-208ENST00000594387 IGLV1-44P01699 117 aa15.1■□□□□ 0.01
IRF3-208ENST00000594387 QDPRP09417 244 aa15.1■□□□□ 0.01
IRF3-208ENST00000594387 OR8G3PP0DMU2 310 aa15.1■□□□□ 0.01
IRF3-208ENST00000594387 B4GALT1P15291 398 aa15.1■□□□□ 0.01
IRF3-208ENST00000594387 PIGFQ07326 219 aa15.1■□□□□ 0.01
IRF3-208ENST00000594387 ANKDD1AQ495B1 522 aa15.1■□□□□ 0.01
IRF3-208ENST00000594387 VHLLQ6RSH7 139 aa15.1■□□□□ 0.01
IRF3-208ENST00000594387 C16orf89Q6UX73 402 aa15.1■□□□□ 0.01
IRF3-208ENST00000594387 B3GLCTQ6Y288 498 aa15.1■□□□□ 0.01
IRF3-208ENST00000594387 PIGWQ7Z7B1 504 aa15.1■□□□□ 0.01
IRF3-208ENST00000594387 MDP1Q86V88 176 aa15.1■□□□□ 0.01
IRF3-208ENST00000594387 RHNO1Q9BSD3 238 aa15.1■□□□□ 0.01
IRF3-208ENST00000594387 GSX1Q9H4S2 264 aaPredicted RBP15.1■□□□□ 0.01
IRF3-208ENST00000594387 DHHO43323 396 aa15.09■□□□□ 0.01
IRF3-208ENST00000594387 IGHV4-39P01824 125 aa15.09■□□□□ 0.01
IRF3-208ENST00000594387 HLA-HP01893 362 aa15.09■□□□□ 0.01
IRF3-208ENST00000594387 ACADSP16219 412 aa15.09■□□□□ 0.01
IRF3-208ENST00000594387 SERPINF1P36955 418 aa15.09■□□□□ 0.01
IRF3-208ENST00000594387 GUCA1AP43080 201 aaPredicted RBP15.09■□□□□ 0.01
IRF3-208ENST00000594387 PTDSS1P48651 473 aaKnown RBP15.09■□□□□ 0.01
IRF3-208ENST00000594387 DSCR9P59020 149 aa15.09■□□□□ 0.01
IRF3-208ENST00000594387 RAB1AP62820 205 aa15.09■□□□□ 0.01
IRF3-208ENST00000594387 GALK2Q01415 458 aa15.09■□□□□ 0.01
IRF3-208ENST00000594387 ALG10Q5BKT4 473 aa15.09■□□□□ 0.01
IRF3-208ENST00000594387 SAMD4BQ5PRF9 694 aaKnown RBP15.09■□□□□ 0.01
IRF3-208ENST00000594387 TMEM53Q6P2H8 277 aa15.09■□□□□ 0.01
IRF3-208ENST00000594387 ZNF627Q7L945 461 aa15.09■□□□□ 0.01
IRF3-208ENST00000594387 DPPA2Q7Z7J5 298 aa15.09■□□□□ 0.01
IRF3-208ENST00000594387 NRMQ8IXM6 262 aa15.09■□□□□ 0.01
IRF3-208ENST00000594387 PGAM4Q8N0Y7 254 aa15.09■□□□□ 0.01
IRF3-208ENST00000594387 ACOT11Q8WXI4 607 aaPredicted RBP15.09■□□□□ 0.01
IRF3-208ENST00000594387 COX4I2Q96KJ9 171 aa15.09■□□□□ 0.01
IRF3-208ENST00000594387 RNF121Q9H920 327 aa15.09■□□□□ 0.01
IRF3-208ENST00000594387 KRCC1Q9NPI7 259 aaPredicted RBP15.09■□□□□ 0.01
IRF3-208ENST00000594387 CA10Q9NS85 328 aa15.09■□□□□ 0.01
IRF3-208ENST00000594387 GDF2Q9UK05 429 aaPredicted RBP15.09■□□□□ 0.01
IRF3-208ENST00000594387 ARFGEF3Q5TH69 2177 aa15.08■□□□□ 0.01
IRF3-208ENST00000594387 EFCAB9A8MZ26 197 aa15.08■□□□□ 0
IRF3-208ENST00000594387 B9A039 149 aa15.08■□□□□ 0
IRF3-208ENST00000594387 J3KTA2 159 aa15.08■□□□□ 0
IRF3-208ENST00000594387 MGRN1O60291 552 aa15.08■□□□□ 0
IRF3-208ENST00000594387 PIP5K1CO60331 668 aa15.08■□□□□ 0
IRF3-208ENST00000594387 PDE5AO76074 875 aa15.08■□□□□ 0
IRF3-208ENST00000594387 ERCC1P07992 297 aaPredicted RBP15.08■□□□□ 0
IRF3-208ENST00000594387 PGA4P0DJD7 388 aa15.08■□□□□ 0
IRF3-208ENST00000594387 PGA3P0DJD8 388 aa15.08■□□□□ 0
IRF3-208ENST00000594387 ITGA2P17301 1181 aa15.08■□□□□ 0
IRF3-208ENST00000594387 TCN1P20061 433 aaPredicted RBP15.08■□□□□ 0
IRF3-208ENST00000594387 ACVR1BP36896 505 aa15.08■□□□□ 0
IRF3-208ENST00000594387 SLC9A3P48764 834 aa15.08■□□□□ 0
IRF3-208ENST00000594387 PRKCDQ05655 676 aa15.08■□□□□ 0
IRF3-208ENST00000594387 TNK1Q13470 666 aa15.08■□□□□ 0
IRF3-208ENST00000594387 LAPTM4AQ15012 233 aa15.08■□□□□ 0
IRF3-208ENST00000594387 SLC36A2Q495M3 483 aa15.08■□□□□ 0
IRF3-208ENST00000594387 GKAP1Q5VSY0 366 aaPredicted RBP15.08■□□□□ 0
IRF3-208ENST00000594387 C11orf71Q6IPW1 123 aa15.08■□□□□ 0
IRF3-208ENST00000594387 CLEC2AQ6UVW9 174 aa15.08■□□□□ 0
IRF3-208ENST00000594387 OAFQ86UD1 273 aa15.08■□□□□ 0
IRF3-208ENST00000594387 SLC22A24Q8N4F4 322 aa15.08■□□□□ 0
IRF3-208ENST00000594387 RNF148Q8N7C7 305 aa15.08■□□□□ 0
IRF3-208ENST00000594387 NUP37Q8NFH4 326 aa15.08■□□□□ 0
IRF3-208ENST00000594387 FNDC8Q8TC99 324 aa15.08■□□□□ 0
IRF3-208ENST00000594387 MCUR1Q96AQ8 359 aa15.08■□□□□ 0
IRF3-208ENST00000594387 RBP7Q96R05 134 aa15.08■□□□□ 0
IRF3-208ENST00000594387 TXNIPQ9H3M7 391 aa15.08■□□□□ 0
IRF3-208ENST00000594387 ANKRD19PQ9H560 264 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms