RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 FOXB1Q99853 325 aa15.52■□□□□ 0.08
H3F3B-209ENST00000589949 TPK1Q9H3S4 243 aa15.52■□□□□ 0.08
H3F3B-209ENST00000589949 INTS9Q9NV88 658 aaKnown RBP15.52■□□□□ 0.08
H3F3B-209ENST00000589949 POFUT2Q9Y2G5 429 aa15.52■□□□□ 0.08
H3F3B-209ENST00000589949 ZNF726A6NNF4 738 aa15.51■□□□□ 0.07
H3F3B-209ENST00000589949 FBP2O00757 339 aa15.51■□□□□ 0.07
H3F3B-209ENST00000589949 MT-ATP6P00846 226 aa15.51■□□□□ 0.07
H3F3B-209ENST00000589949 C8BP07358 591 aa15.51■□□□□ 0.07
H3F3B-209ENST00000589949 PTDSS1P48651 473 aaKnown RBP15.51■□□□□ 0.07
H3F3B-209ENST00000589949 CBX1P83916 185 aa15.51■□□□□ 0.07
H3F3B-209ENST00000589949 RIN1Q13671 783 aa15.51■□□□□ 0.07
H3F3B-209ENST00000589949 TRIP10Q15642 601 aa15.51■□□□□ 0.07
H3F3B-209ENST00000589949 LRFN4Q6PJG9 635 aa15.51■□□□□ 0.07
H3F3B-209ENST00000589949 IL17RDQ8NFM7 739 aa15.51■□□□□ 0.07
H3F3B-209ENST00000589949 TMEM158Q8WZ71 300 aa15.51■□□□□ 0.07
H3F3B-209ENST00000589949 PRSS27Q9BQR3 290 aa15.51■□□□□ 0.07
H3F3B-209ENST00000589949 ZNF426Q9BUY5 554 aa15.51■□□□□ 0.07
H3F3B-209ENST00000589949 RABEP2Q9H5N1 569 aa15.51■□□□□ 0.07
H3F3B-209ENST00000589949 NPHS2Q9NP85 383 aa15.51■□□□□ 0.07
H3F3B-209ENST00000589949 MYEF2Q9P2K5 600 aaKnown RBP15.51■□□□□ 0.07
H3F3B-209ENST00000589949 LPAR3Q9UBY5 353 aa15.51■□□□□ 0.07
H3F3B-209ENST00000589949 KCNS2Q9ULS6 477 aa15.51■□□□□ 0.07
H3F3B-209ENST00000589949 SLC7A7Q9UM01 511 aa15.51■□□□□ 0.07
H3F3B-209ENST00000589949 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.51■□□□□ 0.071e-11■■■■□ 25.6
H3F3B-209ENST00000589949 KPNA4O00629 521 aaPredicted RBP15.5■□□□□ 0.07
H3F3B-209ENST00000589949 TGFAP01135 160 aa15.5■□□□□ 0.07
H3F3B-209ENST00000589949 TACSTD2P09758 323 aa15.5■□□□□ 0.07
H3F3B-209ENST00000589949 PCGF2P35227 344 aa15.5■□□□□ 0.07
H3F3B-209ENST00000589949 CSNK1A1P48729 337 aa15.5■□□□□ 0.07
H3F3B-209ENST00000589949 RAB1AP62820 205 aa15.5■□□□□ 0.07
H3F3B-209ENST00000589949 NFYCQ13952 458 aa15.5■□□□□ 0.07
H3F3B-209ENST00000589949 MELKQ14680 651 aa15.5■□□□□ 0.07
H3F3B-209ENST00000589949 RAB39AQ14964 217 aa15.5■□□□□ 0.07
H3F3B-209ENST00000589949 FXNQ16595 210 aa15.5■□□□□ 0.07
H3F3B-209ENST00000589949 SLC35D2Q76EJ3 337 aa15.5■□□□□ 0.07
H3F3B-209ENST00000589949 ZNF786Q8N393 782 aa15.5■□□□□ 0.07
H3F3B-209ENST00000589949 OR10A6Q8NH74 314 aa15.5■□□□□ 0.07
H3F3B-209ENST00000589949 OR6X1Q8NH79 312 aa15.5■□□□□ 0.07
H3F3B-209ENST00000589949 NEU4Q8WWR8 484 aaPredicted RBP15.5■□□□□ 0.07
H3F3B-209ENST00000589949 MRPL24Q96A35 216 aaKnown RBP15.5■□□□□ 0.07
H3F3B-209ENST00000589949 MAGEB18Q96M61 343 aa15.5■□□□□ 0.07
H3F3B-209ENST00000589949 EVA1AQ9H8M9 152 aa15.5■□□□□ 0.07
H3F3B-209ENST00000589949 DYNLRB1Q9NP97 96 aa15.5■□□□□ 0.07
H3F3B-209ENST00000589949 MEPEQ9NQ76 525 aaPredicted RBP15.5■□□□□ 0.07
H3F3B-209ENST00000589949 FZR1Q9UM11 496 aa15.5■□□□□ 0.07
H3F3B-209ENST00000589949 CMAHPQ9Y471 501 aa15.5■□□□□ 0.07
H3F3B-209ENST00000589949 ANGPT2O15123 496 aa15.49■□□□□ 0.07
H3F3B-209ENST00000589949 EDF1O60869 148 aaKnown RBP15.49■□□□□ 0.07
H3F3B-209ENST00000589949 ASAH2BP0C7U1 165 aa15.49■□□□□ 0.07
H3F3B-209ENST00000589949 TCN1P20061 433 aaPredicted RBP15.49■□□□□ 0.07
H3F3B-209ENST00000589949 TNFRSF1BP20333 461 aa15.49■□□□□ 0.07
H3F3B-209ENST00000589949 MDH1P40925 334 aaKnown RBP15.49■□□□□ 0.07
H3F3B-209ENST00000589949 SEC24CP53992 1094 aa15.49■□□□□ 0.07
H3F3B-209ENST00000589949 RUNX1T1Q06455 604 aa15.49■□□□□ 0.07
H3F3B-209ENST00000589949 ZP4Q12836 540 aa15.49■□□□□ 0.07
H3F3B-209ENST00000589949 MAD2L1BPQ15013 274 aaPredicted RBP15.49■□□□□ 0.07
H3F3B-209ENST00000589949 CARM1Q86X55 608 aa15.49■□□□□ 0.07
H3F3B-209ENST00000589949 PAQR4Q8N4S7 273 aaPredicted RBP15.49■□□□□ 0.07
H3F3B-209ENST00000589949 UBASH3BQ8TF42 649 aa15.49■□□□□ 0.07
H3F3B-209ENST00000589949 SNX18Q96RF0 628 aa15.49■□□□□ 0.07
H3F3B-209ENST00000589949 SYT3Q9BQG1 590 aa15.49■□□□□ 0.07
H3F3B-209ENST00000589949 PCDHAC1Q9H158 963 aa15.49■□□□□ 0.07
H3F3B-209ENST00000589949 B3GAT2Q9NPZ5 323 aa15.49■□□□□ 0.07
H3F3B-209ENST00000589949 GLTPQ9NZD2 209 aa15.49■□□□□ 0.07
H3F3B-209ENST00000589949 TRAPPC13A5PLN9 417 aa15.48■□□□□ 0.07
H3F3B-209ENST00000589949 FXYD1O00168 92 aa15.48■□□□□ 0.07
H3F3B-209ENST00000589949 SRD5A1P18405 259 aa15.48■□□□□ 0.07
H3F3B-209ENST00000589949 ALDH3B1P43353 468 aa15.48■□□□□ 0.07
H3F3B-209ENST00000589949 RABL3Q5HYI8 236 aa15.48■□□□□ 0.07
H3F3B-209ENST00000589949 ELFN2Q5R3F8 820 aa15.48■□□□□ 0.07
H3F3B-209ENST00000589949 NANOGP8Q6NSW7 305 aa15.48■□□□□ 0.07
H3F3B-209ENST00000589949 SLC22A24Q8N4F4 322 aa15.48■□□□□ 0.07
H3F3B-209ENST00000589949 TSPEARQ8WU66 669 aa15.48■□□□□ 0.07
H3F3B-209ENST00000589949 SH3GL3Q99963 347 aa15.48■□□□□ 0.07
H3F3B-209ENST00000589949 NANOGQ9H9S0 305 aa15.48■□□□□ 0.07
H3F3B-209ENST00000589949 TMEM38BQ9NVV0 291 aa15.48■□□□□ 0.07
H3F3B-209ENST00000589949 REV1Q9UBZ9 1251 aa15.48■□□□□ 0.07
H3F3B-209ENST00000589949 A0A0G2JND7 137 aa15.47■□□□□ 0.07
H3F3B-209ENST00000589949 VSTM5A8MXK1 200 aa15.47■□□□□ 0.07
H3F3B-209ENST00000589949 SYNGR3O43761 229 aa15.47■□□□□ 0.07
H3F3B-209ENST00000589949 HPXP02790 462 aa15.47■□□□□ 0.07
H3F3B-209ENST00000589949 PGA4P0DJD7 388 aa15.47■□□□□ 0.07
H3F3B-209ENST00000589949 PGA3P0DJD8 388 aa15.47■□□□□ 0.07
H3F3B-209ENST00000589949 GLRXP35754 106 aa15.47■□□□□ 0.07
H3F3B-209ENST00000589949 VMACQ2NL98 169 aa15.47■□□□□ 0.07
H3F3B-209ENST00000589949 CR1LQ2VPA4 569 aa15.47■□□□□ 0.07
H3F3B-209ENST00000589949 TRMT5Q32P41 509 aaKnown RBP15.47■□□□□ 0.07
H3F3B-209ENST00000589949 TTC33Q6PID6 262 aaPredicted RBP15.47■□□□□ 0.07
H3F3B-209ENST00000589949 CCDC80Q76M96 950 aa15.47■□□□□ 0.07
H3F3B-209ENST00000589949 PIWIL3Q7Z3Z3 882 aaKnown RBP15.47■□□□□ 0.07
H3F3B-209ENST00000589949 PATL1Q86TB9 770 aaKnown RBP15.47■□□□□ 0.07
H3F3B-209ENST00000589949 CALHM3Q86XJ0 350 aa15.47■□□□□ 0.07
H3F3B-209ENST00000589949 ZNF540Q8NDQ6 660 aa15.47■□□□□ 0.07
H3F3B-209ENST00000589949 SLC25A44Q96H78 314 aaPredicted RBP15.47■□□□□ 0.07
H3F3B-209ENST00000589949 NANSQ9NR45 359 aa15.47■□□□□ 0.07
H3F3B-209ENST00000589949 FBXO9Q9UK97 447 aaPredicted RBP15.47■□□□□ 0.07
H3F3B-209ENST00000589949 WNT9BO14905 357 aa15.46■□□□□ 0.07
H3F3B-209ENST00000589949 RNF13O43567 381 aa15.46■□□□□ 0.07
H3F3B-209ENST00000589949 SHOX2O60902 331 aaPredicted RBP15.46■□□□□ 0.07
H3F3B-209ENST00000589949 OR6A2O95222 327 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms