RNA–Protein interactions for RNA: ENST00000589933.1

TMC6-213, Transcript of transmembrane channel like 6, human

TSL 3

Gene TMC6, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-213	ENST00000589933	ZNF346	Q9UL40	294 aa	Known RBP	18.19	■□□□□ 0.5
TMC6-213	ENST00000589933	STAB1	Q9NY15	2570 aa		18.18	■□□□□ 0.5
TMC6-213	ENST00000589933	SLC22A23	A1A5C7	686 aa		18.18	■□□□□ 0.5
TMC6-213	ENST00000589933	CPSF4L	A6NMK7	179 aa	Known RBP	18.18	■□□□□ 0.5
TMC6-213	ENST00000589933	RNF13	O43567	381 aa		18.18	■□□□□ 0.5
TMC6-213	ENST00000589933	LILRA1	O75019	489 aa		18.18	■□□□□ 0.5
TMC6-213	ENST00000589933	OR8G3P	P0DMU2	310 aa		18.18	■□□□□ 0.5
TMC6-213	ENST00000589933	UMPS	P11172	480 aa		18.18	■□□□□ 0.5
TMC6-213	ENST00000589933	ZNF35	P13682	527 aa		18.18	■□□□□ 0.5
TMC6-213	ENST00000589933	ENTPD8	Q5MY95	495 aa		18.18	■□□□□ 0.5
TMC6-213	ENST00000589933	DLEU7	Q6UYE1	221 aa		18.18	■□□□□ 0.5
TMC6-213	ENST00000589933	SLC35D2	Q76EJ3	337 aa		18.18	■□□□□ 0.5
TMC6-213	ENST00000589933	DPPA2	Q7Z7J5	298 aa		18.18	■□□□□ 0.5
TMC6-213	ENST00000589933	TSPEAR	Q8WU66	669 aa		18.18	■□□□□ 0.5
TMC6-213	ENST00000589933	STON2	Q8WXE9	905 aa		18.18	■□□□□ 0.5
TMC6-213	ENST00000589933	ZNF566	Q969W8	418 aa		18.18	■□□□□ 0.5
TMC6-213	ENST00000589933	MS4A3	Q96HJ5	214 aa		18.18	■□□□□ 0.5
TMC6-213	ENST00000589933	MPP4	Q96JB8	637 aa		18.18	■□□□□ 0.5
TMC6-213	ENST00000589933	SNX18	Q96RF0	628 aa		18.18	■□□□□ 0.5
TMC6-213	ENST00000589933	CGREF1	Q99674	301 aa		18.18	■□□□□ 0.5
TMC6-213	ENST00000589933	ARHGDIG	Q99819	225 aa		18.18	■□□□□ 0.5
TMC6-213	ENST00000589933	MRPL37	Q9BZE1	423 aa	Known RBP	18.18	■□□□□ 0.5
TMC6-213	ENST00000589933	INTS9	Q9NV88	658 aa	Known RBP	18.18	■□□□□ 0.5
TMC6-213	ENST00000589933	GLTP	Q9NZD2	209 aa		18.18	■□□□□ 0.5
TMC6-213	ENST00000589933	TMEFF2	Q9UIK5	374 aa	Predicted RBP	18.18	■□□□□ 0.5
TMC6-213	ENST00000589933	ANK3	Q12955	4377 aa	Known RBP	18.18	■□□□□ 0.5
TMC6-213	ENST00000589933	TRAPPC13	A5PLN9	417 aa		18.17	■□□□□ 0.5
TMC6-213	ENST00000589933	TPST2	O60704	377 aa		18.17	■□□□□ 0.5
TMC6-213	ENST00000589933	CH25H	O95992	272 aa		18.17	■□□□□ 0.5
TMC6-213	ENST00000589933	CD247	P20963	164 aa		18.17	■□□□□ 0.5
TMC6-213	ENST00000589933	PCBP3	P57721	371 aa	Known RBP	18.17	■□□□□ 0.5
TMC6-213	ENST00000589933	ZP4	Q12836	540 aa		18.17	■□□□□ 0.5
TMC6-213	ENST00000589933	DUSP7	Q16829	419 aa		18.17	■□□□□ 0.5
TMC6-213	ENST00000589933	KRTAP24-1	Q3LI83	254 aa		18.17	■□□□□ 0.5
TMC6-213	ENST00000589933	TMEM53	Q6P2H8	277 aa		18.17	■□□□□ 0.5
TMC6-213	ENST00000589933	LINC00114	Q6XXX2	140 aa		18.17	■□□□□ 0.5
TMC6-213	ENST00000589933	DPP10	Q8N608	796 aa		18.17	■□□□□ 0.5
TMC6-213	ENST00000589933	ADAMTS16	Q8TE57	1224 aa		18.17	■□□□□ 0.5
TMC6-213	ENST00000589933	C19orf24	Q9BVV8	132 aa		18.17	■□□□□ 0.5
TMC6-213	ENST00000589933	SLC19A3	Q9BZV2	496 aa		18.17	■□□□□ 0.5
TMC6-213	ENST00000589933	LRRN3	E7EW58	273 aa		18.16	■□□□□ 0.5
TMC6-213	ENST00000589933	PTH	P01270	115 aa		18.16	■□□□□ 0.5
TMC6-213	ENST00000589933	OPN1SW	P03999	348 aa		18.16	■□□□□ 0.5
TMC6-213	ENST00000589933	SERPINA5	P05154	406 aa		18.16	■□□□□ 0.5
TMC6-213	ENST00000589933	RIN1	Q13671	783 aa		18.16	■□□□□ 0.5
TMC6-213	ENST00000589933	NFYC	Q13952	458 aa		18.16	■□□□□ 0.5
TMC6-213	ENST00000589933	RAB39A	Q14964	217 aa		18.16	■□□□□ 0.5
TMC6-213	ENST00000589933	ZNF74	Q16587	644 aa		18.16	■□□□□ 0.5
TMC6-213	ENST00000589933	HDDC2	Q7Z4H3	204 aa		18.16	■□□□□ 0.5
TMC6-213	ENST00000589933	PTOV1	Q86YD1	416 aa		18.16	■□□□□ 0.5
TMC6-213	ENST00000589933	SLC22A24	Q8N4F4	322 aa		18.16	■□□□□ 0.5
TMC6-213	ENST00000589933	RFLNB	Q8N5W9	214 aa		18.16	■□□□□ 0.5
TMC6-213	ENST00000589933	OR6T1	Q8NGN1	323 aa		18.16	■□□□□ 0.5
TMC6-213	ENST00000589933	TMEM54	Q969K7	222 aa		18.16	■□□□□ 0.5
TMC6-213	ENST00000589933	SLC25A44	Q96H78	314 aa	Predicted RBP	18.16	■□□□□ 0.5
TMC6-213	ENST00000589933	SYT3	Q9BQG1	590 aa		18.16	■□□□□ 0.5
TMC6-213	ENST00000589933	LRMDA	Q9H2I8	198 aa		18.16	■□□□□ 0.5
TMC6-213	ENST00000589933	C1orf198	Q9H425	327 aa		18.16	■□□□□ 0.5
TMC6-213	ENST00000589933	RNF121	Q9H920	327 aa		18.16	■□□□□ 0.5
TMC6-213	ENST00000589933	ZNF229	Q9UJW7	825 aa		18.16	■□□□□ 0.5
TMC6-213	ENST00000589933	SLC7A7	Q9UM01	511 aa		18.16	■□□□□ 0.5
TMC6-213	ENST00000589933		A0A1W2PPW3	197 aa		18.15	■□□□□ 0.5
TMC6-213	ENST00000589933	BCL10	O95999	233 aa		18.15	■□□□□ 0.5
TMC6-213	ENST00000589933	GPR6	P46095	362 aa	Predicted RBP	18.15	■□□□□ 0.5
TMC6-213	ENST00000589933	CDH15	P55291	814 aa		18.15	■□□□□ 0.5
TMC6-213	ENST00000589933	MTPN	P58546	118 aa		18.15	■□□□□ 0.5
TMC6-213	ENST00000589933	SLC36A2	Q495M3	483 aa		18.15	■□□□□ 0.5
TMC6-213	ENST00000589933	RGS7BP	Q6MZT1	257 aa	Predicted RBP	18.15	■□□□□ 0.5
TMC6-213	ENST00000589933	NHLRC1	Q6VVB1	395 aa		18.15	■□□□□ 0.5
TMC6-213	ENST00000589933	NANOGNB	Q7Z5D8	188 aa		18.15	■□□□□ 0.5
TMC6-213	ENST00000589933	OR1J2	Q8NGS2	313 aa		18.15	■□□□□ 0.5
TMC6-213	ENST00000589933	VANGL1	Q8TAA9	524 aa	Predicted RBP	18.15	■□□□□ 0.5
TMC6-213	ENST00000589933	RDH5	Q92781	318 aa		18.15	■□□□□ 0.5
TMC6-213	ENST00000589933	ZNF75A	Q96N20	296 aa		18.15	■□□□□ 0.5
TMC6-213	ENST00000589933	WFDC6	Q9BQY6	131 aa		18.15	■□□□□ 0.5
TMC6-213	ENST00000589933	CDH20	Q9HBT6	801 aa		18.15	■□□□□ 0.5
TMC6-213	ENST00000589933	DUSP13	Q9UII6	198 aa		18.15	■□□□□ 0.5
TMC6-213	ENST00000589933		A0A1W2PRG6	482 aa		18.14	■□□□□ 0.49
TMC6-213	ENST00000589933		B4DSR2	109 aa		18.14	■□□□□ 0.49
TMC6-213	ENST00000589933	DHH	O43323	396 aa		18.14	■□□□□ 0.49
TMC6-213	ENST00000589933	TCF21	O43680	179 aa		18.14	■□□□□ 0.49
TMC6-213	ENST00000589933	MGRN1	O60291	552 aa		18.14	■□□□□ 0.49
TMC6-213	ENST00000589933	IGHG1	P01857	330 aa		18.14	■□□□□ 0.49
TMC6-213	ENST00000589933	ACHE	P22303	614 aa		18.14	■□□□□ 0.49
TMC6-213	ENST00000589933	PCGF2	P35227	344 aa		18.14	■□□□□ 0.49
TMC6-213	ENST00000589933	ZNF84	P51523	738 aa		18.14	■□□□□ 0.49
TMC6-213	ENST00000589933	DVL1P1	P54792	670 aa	Predicted RBP	18.14	■□□□□ 0.49
TMC6-213	ENST00000589933	CLRN1	P58418	232 aa		18.14	■□□□□ 0.49
TMC6-213	ENST00000589933	PLP2	Q04941	152 aa		18.14	■□□□□ 0.49
TMC6-213	ENST00000589933	SCGB2A2	Q13296	93 aa		18.14	■□□□□ 0.49
TMC6-213	ENST00000589933	NPTX1	Q15818	432 aa		18.14	■□□□□ 0.49
TMC6-213	ENST00000589933	FXN	Q16595	210 aa		18.14	■□□□□ 0.49
TMC6-213	ENST00000589933	GLCCI1	Q86VQ1	547 aa		18.14	■□□□□ 0.49
TMC6-213	ENST00000589933	SKA3	Q8IX90	412 aa		18.14	■□□□□ 0.49
TMC6-213	ENST00000589933	SNX33	Q8WV41	574 aa		18.14	■□□□□ 0.49
TMC6-213	ENST00000589933	SH3GL1	Q99961	368 aa		18.14	■□□□□ 0.49
TMC6-213	ENST00000589933	SIKE1	Q9BRV8	207 aa		18.14	■□□□□ 0.49
TMC6-213	ENST00000589933	SOX7	Q9BT81	388 aa		18.14	■□□□□ 0.49
TMC6-213	ENST00000589933	KCNN2	Q9H2S1	579 aa		18.14	■□□□□ 0.49
TMC6-213	ENST00000589933	ZNF385D	Q9H6B1	395 aa		18.14	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms