RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 PDK3Q15120 406 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 PAGE3Q5JUK9 113 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 TIMM23BQ5SRD1 257 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 NCMAPQ5T1S8 102 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 RNF220Q5VTB9 566 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 ABLIM2Q6H8Q1 611 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 OR7E24Q6IFN5 339 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 HMBOX1Q6NT76 420 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 PAQR6Q6TCH4 344 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 TMEM108Q6UXF1 575 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 ABHD12BQ7Z5M8 362 aaPredicted RBP7.22□□□□□ -1.25
DNMT1-219ENST00000589349 DHDDSQ86SQ9 333 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 ARMC8Q8IUR7 673 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 KDM8Q8N371 416 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 ZNF433Q8N7K0 673 aaPredicted RBP7.22□□□□□ -1.25
DNMT1-219ENST00000589349 ZNF611Q8N823 705 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 SMYD1Q8NB12 490 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 CPEB3Q8NE35 698 aaKnown RBP7.22□□□□□ -1.25
DNMT1-219ENST00000589349 CKAP2Q8WWK9 683 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 PIP5K1AQ99755 562 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 FAIMQ9NVQ4 179 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 VAPAQ9P0L0 249 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 ING1Q9UK53 422 aaPredicted RBP7.22□□□□□ -1.25
DNMT1-219ENST00000589349 HEATR5AQ86XA9 2040 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 IGKV3D-15A0A087WSY6 115 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 DPRXA6NFQ7 191 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 LIPT2A6NK58 231 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 OR5H1A6NKK0 313 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 MARCH11A6NNE9 402 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 ZNF716A6NP11 495 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 ZNF587BE7ETH6 402 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 OR6A2O95222 327 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 OPN1SWP03999 348 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 ZNF43P17038 809 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 AHCYP23526 432 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 PCSK6P29122 969 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 FABP6P51161 128 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 HMGA2P52926 109 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 MVDP53602 400 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 CLDN17P56750 224 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 MTPNP58546 118 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 PRPS1P60891 318 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 MAPK11Q15759 364 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 ZNF672Q499Z4 452 aaPredicted RBP7.21□□□□□ -1.26
DNMT1-219ENST00000589349 ALG10BQ5I7T1 473 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 TSPO2Q5TGU0 170 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 AGAP6Q5VW22 663 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 CARD17Q5XLA6 110 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 BIVMQ86UB2 503 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 RANBP3LQ86VV4 465 aaPredicted RBP7.21□□□□□ -1.26
DNMT1-219ENST00000589349 P2RY8Q86VZ1 359 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 FUNDC1Q8IVP5 155 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 FBXL14Q8N1E6 418 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 LRRC75A-AS1Q8N1F1 130 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 GPR137CQ8N3F9 429 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 POMGNT2Q8NAT1 580 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 C11orf65Q8NCR3 313 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 VANGL1Q8TAA9 524 aaPredicted RBP7.21□□□□□ -1.26
DNMT1-219ENST00000589349 MLST8Q9BVC4 326 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 TRIM2Q9C040 744 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 SLCO5A1Q9H2Y9 848 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 VIPAS39Q9H9C1 493 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 TCF7L1Q9HCS4 588 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 SLC7A10Q9NS82 523 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 TMEM45AQ9NWC5 275 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 SLC25A37Q9NYZ2 338 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 NOX1Q9Y5S8 564 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 FLVCR1Q9Y5Y0 555 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 FBN3Q75N90 2809 aa7.21□□□□□ -1.26
DNMT1-219ENST00000589349 A0A1B0GWA3 101 aa7.2□□□□□ -1.26
DNMT1-219ENST00000589349 AQP7P3A6NL99 342 aa7.2□□□□□ -1.26
DNMT1-219ENST00000589349 FAAHO00519 579 aa7.2□□□□□ -1.26
DNMT1-219ENST00000589349 LGI1O95970 557 aa7.2□□□□□ -1.26
DNMT1-219ENST00000589349 SOD3P08294 240 aa7.2□□□□□ -1.26
DNMT1-219ENST00000589349 PNMTP11086 282 aa7.2□□□□□ -1.26
DNMT1-219ENST00000589349 ETS2P15036 469 aa7.2□□□□□ -1.26
DNMT1-219ENST00000589349 PTAFRP25105 342 aa7.2□□□□□ -1.26
DNMT1-219ENST00000589349 LOXP28300 417 aaPredicted RBP7.2□□□□□ -1.26
DNMT1-219ENST00000589349 PRKAR1BP31321 381 aa7.2□□□□□ -1.26
DNMT1-219ENST00000589349 ATP4BP51164 291 aa7.2□□□□□ -1.26
DNMT1-219ENST00000589349 ARFIP2P53365 341 aa7.2□□□□□ -1.26
DNMT1-219ENST00000589349 FOXG1P55316 489 aaPredicted RBP7.2□□□□□ -1.26
DNMT1-219ENST00000589349 PPP2R2BQ00005 443 aa7.2□□□□□ -1.26
DNMT1-219ENST00000589349 LTBQ06643 244 aa7.2□□□□□ -1.26
DNMT1-219ENST00000589349 CYLC2Q14093 348 aaPredicted RBP7.2□□□□□ -1.26
DNMT1-219ENST00000589349 SLC17A1Q14916 467 aa7.2□□□□□ -1.26
DNMT1-219ENST00000589349 CARTPTQ16568 116 aa7.2□□□□□ -1.26
DNMT1-219ENST00000589349 CLEC12BQ2HXU8 276 aa7.2□□□□□ -1.26
DNMT1-219ENST00000589349 HIKESHIQ53FT3 197 aa7.2□□□□□ -1.26
DNMT1-219ENST00000589349 SSX8Q7RTT4 187 aa7.2□□□□□ -1.26
DNMT1-219ENST00000589349 DNAJA4Q8WW22 397 aaPredicted RBP7.2□□□□□ -1.26
DNMT1-219ENST00000589349 SLC38A4Q969I6 547 aa7.2□□□□□ -1.26
DNMT1-219ENST00000589349 C3orf49Q96BT1 292 aa7.2□□□□□ -1.26
DNMT1-219ENST00000589349 KTI12Q96EK9 354 aaPredicted RBP7.2□□□□□ -1.26
DNMT1-219ENST00000589349 SLC47A1Q96FL8 570 aa7.2□□□□□ -1.26
DNMT1-219ENST00000589349 ADAD1Q96M93 576 aaKnown RBP7.2□□□□□ -1.26
DNMT1-219ENST00000589349 ZNF385AQ96PM9 386 aaKnown RBP7.2□□□□□ -1.26
DNMT1-219ENST00000589349 ALKBH3Q96Q83 286 aaPredicted RBP7.2□□□□□ -1.26
DNMT1-219ENST00000589349 EPYCQ99645 322 aa7.2□□□□□ -1.26
DNMT1-219ENST00000589349 ECSITQ9BQ95 431 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms