RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 RCVRNP35243 200 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 CDKN2AP42771 156 aaKnown RBP6.72□□□□□ -1.33
ZNF540-206ENST00000589117 SCAND1P57086 179 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 RPS11P62280 158 aaKnown RBP eCLIP6.72□□□□□ -1.33
ZNF540-206ENST00000589117 ALKBH1Q13686 389 aaKnown RBP6.72□□□□□ -1.33
ZNF540-206ENST00000589117 CBFBQ13951 182 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 NSDHLQ15738 373 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 BCL2L15Q5TBC7 163 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 FNDC7Q5VTL7 733 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 CD276Q5ZPR3 534 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 LYPD4Q6UWN0 246 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 C5orf46Q6UWT4 87 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 CREB3L2Q70SY1 520 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 UTS2BQ765I0 119 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 MAMDC2Q7Z304 686 aaPredicted RBP6.72□□□□□ -1.33
ZNF540-206ENST00000589117 FAM122BQ7Z309 247 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 C17orf82Q86X59 251 aaPredicted RBP6.72□□□□□ -1.33
ZNF540-206ENST00000589117 GHDCQ8N2G8 530 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 CLRN3Q8NCR9 226 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 LSM14AQ8ND56 463 aaKnown RBP6.72□□□□□ -1.33
ZNF540-206ENST00000589117 ZNF248Q8NDW4 579 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 OR13C5Q8NGS8 318 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 OR56B4Q8NH76 319 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 SMIM4Q8WVI0 70 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 ASB17Q8WXJ9 295 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 RNF170Q96K19 258 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 GAL3ST4Q96RP7 486 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 LPAR4Q99677 370 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 ORAI3Q9BRQ5 295 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 TTTY10Q9BZA0 68 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 TPSD1Q9BZJ3 242 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 NXF5Q9H1B4 397 aaKnown RBP6.72□□□□□ -1.33
ZNF540-206ENST00000589117 WDR76Q9H967 626 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 ZNF304Q9HCX3 659 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 DIABLOQ9NR28 239 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 LANCL2Q9NS86 450 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 IKZF2Q9UKS7 526 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 CLEC4AQ9UMR7 237 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 ETV7Q9Y603 341 aa6.72□□□□□ -1.33
ZNF540-206ENST00000589117 IGKV1D-42A0A075B6H8 117 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 A0A0A6YYJ9 748 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.71□□□□□ -1.33
ZNF540-206ENST00000589117 A0A1B0GVT2 93 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 A0A1W2PR77 199 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 OR2W5A6NFC9 320 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 GABARAPH6UMI1 98 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 HYAL3O43820 417 aaPredicted RBP6.71□□□□□ -1.33
ZNF540-206ENST00000589117 PRAF2O60831 178 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 ZFPL1O95159 310 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 H2AFB2P0C5Z0 115 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 ANXA3P12429 323 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 FBLP22087 321 aaKnown RBP6.71□□□□□ -1.33
ZNF540-206ENST00000589117 GIFP27352 417 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 UQCRC1P31930 480 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 PSMB10P40306 273 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 PNLIPRP2P54317 469 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 GFERP55789 205 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 CD226Q15762 336 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 DEFB133Q30KQ1 61 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 SLC36A2Q495M3 483 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 CEP78Q5JTW2 689 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 POMZP3Q6PJE2 187 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 ZNF767PQ75MW2 155 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 BTN2A1Q7KYR7 527 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 LINGO2Q7L985 606 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 KMT5CQ86Y97 462 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 SIAH3Q8IW03 269 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 ZNF676Q8N7Q3 588 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 RPS4Y2Q8TD47 263 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 METTL21AQ8WXB1 218 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 DEDD2Q8WXF8 326 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 NANOS1Q8WY41 292 aaKnown RBP6.71□□□□□ -1.33
ZNF540-206ENST00000589117 YIPF5Q969M3 257 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 DACT3Q96B18 629 aaPredicted RBP6.71□□□□□ -1.33
ZNF540-206ENST00000589117 DERL3Q96Q80 235 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 INTS14Q96SY0 518 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 GDF15Q99988 308 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 PHF7Q9BWX1 381 aaPredicted RBP6.71□□□□□ -1.33
ZNF540-206ENST00000589117 KLHL9Q9P2J3 617 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 MTCH2Q9Y6C9 303 aa6.71□□□□□ -1.33
ZNF540-206ENST00000589117 TRAV6A0A075B6T7 132 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 A0A1B0GVC2 190 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 A0A1B0GVI7 797 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 TMEM72A0PK05 275 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 C7orf66A4D0T2 115 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 A6NIN4 97 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 ANXA2P2A6NMY6 339 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 A8MUA0 341 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 MAGEB4O15481 346 aaPredicted RBP6.71□□□□□ -1.34
ZNF540-206ENST00000589117 NUDT21O43809 227 aaKnown RBP6.71□□□□□ -1.34
ZNF540-206ENST00000589117 LANCL1O43813 399 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 OR2T1O43869 369 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 RPP14O95059 124 aaKnown RBP6.71□□□□□ -1.34
ZNF540-206ENST00000589117 IGKV3-11P04433 115 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 F13BP05160 661 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 ANXA2P07355 339 aaKnown RBP6.71□□□□□ -1.34
ZNF540-206ENST00000589117 CD3GP09693 182 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 C4BPBP20851 252 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 OR1D4P47884 311 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 ART1P52961 327 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms