RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 ARF1P84077 181 aaKnown RBP17.7■□□□□ 0.42
DDX39A-207ENST00000588542 PPP1R8Q12972 351 aaKnown RBP17.7■□□□□ 0.42
DDX39A-207ENST00000588542 HIST3H3Q16695 136 aa17.7■□□□□ 0.42
DDX39A-207ENST00000588542 FBXW10Q5XX13 1052 aa17.7■□□□□ 0.42
DDX39A-207ENST00000588542 OR6N1Q8NGY5 312 aa17.7■□□□□ 0.42
DDX39A-207ENST00000588542 PLPPR2Q96GM1 343 aa17.7■□□□□ 0.42
DDX39A-207ENST00000588542 RSRC1Q96IZ7 334 aaKnown RBP17.7■□□□□ 0.42
DDX39A-207ENST00000588542 KRCC1Q9NPI7 259 aaPredicted RBP17.7■□□□□ 0.42
DDX39A-207ENST00000588542 GLTPQ9NZD2 209 aa17.7■□□□□ 0.42
DDX39A-207ENST00000588542 ZNF346Q9UL40 294 aaKnown RBP17.7■□□□□ 0.42
DDX39A-207ENST00000588542 ROS1P08922 2347 aa17.7■□□□□ 0.42
DDX39A-207ENST00000588542 OR10H3O60404 316 aa17.69■□□□□ 0.42
DDX39A-207ENST00000588542 TRMUO75648 421 aaKnown RBP17.69■□□□□ 0.42
DDX39A-207ENST00000588542 ACADSP16219 412 aa17.69■□□□□ 0.42
DDX39A-207ENST00000588542 ERFP50548 548 aa17.69■□□□□ 0.42
DDX39A-207ENST00000588542 PRPS1P60891 318 aa17.69■□□□□ 0.42
DDX39A-207ENST00000588542 TBRG1Q3YBR2 411 aa17.69■□□□□ 0.42
DDX39A-207ENST00000588542 C1orf94Q6P1W5 598 aa17.69■□□□□ 0.42
DDX39A-207ENST00000588542 PGBD2Q6P3X8 592 aa17.69■□□□□ 0.42
DDX39A-207ENST00000588542 ANKRD16Q6P6B7 361 aa17.69■□□□□ 0.42
DDX39A-207ENST00000588542 LRFN4Q6PJG9 635 aa17.69■□□□□ 0.42
DDX39A-207ENST00000588542 SSX8Q7RTT4 187 aa17.69■□□□□ 0.42
DDX39A-207ENST00000588542 PAPD5Q8NDF8 572 aaKnown RBP17.69■□□□□ 0.42
DDX39A-207ENST00000588542 MAGEE2Q8TD90 523 aaPredicted RBP17.69■□□□□ 0.42
DDX39A-207ENST00000588542 NRGNQ92686 78 aa17.69■□□□□ 0.42
DDX39A-207ENST00000588542 UTP4Q969X6 686 aaKnown RBP17.69■□□□□ 0.42
DDX39A-207ENST00000588542 SLCO4A1Q96BD0 722 aa17.69■□□□□ 0.42
DDX39A-207ENST00000588542 ULBP2Q9BZM5 246 aa17.69■□□□□ 0.42
DDX39A-207ENST00000588542 PLEKHF2Q9H8W4 249 aa17.69■□□□□ 0.42
DDX39A-207ENST00000588542 B3GAT2Q9NPZ5 323 aa17.69■□□□□ 0.42
DDX39A-207ENST00000588542 AKAP9Q99996 3911 aa17.68■□□□□ 0.42
DDX39A-207ENST00000588542 UNC119BA6NIH7 251 aa17.68■□□□□ 0.42
DDX39A-207ENST00000588542 ZNF99A8MXY4 864 aaPredicted RBP17.68■□□□□ 0.42
DDX39A-207ENST00000588542 CENPBD1B2RD01 187 aa17.68■□□□□ 0.42
DDX39A-207ENST00000588542 EBAG9O00559 213 aa17.68■□□□□ 0.42
DDX39A-207ENST00000588542 IGHG1P01857 330 aa17.68■□□□□ 0.42
DDX39A-207ENST00000588542 FPR3P25089 353 aa17.68■□□□□ 0.42
DDX39A-207ENST00000588542 GSSP48637 474 aa17.68■□□□□ 0.42
DDX39A-207ENST00000588542 RPL27P61353 136 aaKnown RBP17.68■□□□□ 0.42
DDX39A-207ENST00000588542 TOP3AQ13472 1001 aaPredicted RBP17.68■□□□□ 0.42
DDX39A-207ENST00000588542 TAF11Q15544 211 aa17.68■□□□□ 0.42
DDX39A-207ENST00000588542 NCMAPQ5T1S8 102 aa17.68■□□□□ 0.42
DDX39A-207ENST00000588542 ZNF770Q6IQ21 691 aaPredicted RBP17.68■□□□□ 0.42
DDX39A-207ENST00000588542 THSD4Q6ZMP0 1018 aa17.68■□□□□ 0.42
DDX39A-207ENST00000588542 ZNF627Q7L945 461 aa17.68■□□□□ 0.42
DDX39A-207ENST00000588542 NOXO1Q8NFA2 376 aa17.68■□□□□ 0.42
DDX39A-207ENST00000588542 OR9Q2Q8NGE9 314 aa17.68■□□□□ 0.42
DDX39A-207ENST00000588542 ZNF519Q8TB69 540 aa17.68■□□□□ 0.42
DDX39A-207ENST00000588542 HDAC2Q92769 488 aaKnown RBP17.68■□□□□ 0.42
DDX39A-207ENST00000588542 TSPAN32Q96QS1 320 aa17.68■□□□□ 0.42
DDX39A-207ENST00000588542 TMEM204Q9BSN7 226 aa17.68■□□□□ 0.42
DDX39A-207ENST00000588542 KATNB1Q9BVA0 655 aa17.68■□□□□ 0.42
DDX39A-207ENST00000588542 NGBQ9NPG2 151 aa17.68■□□□□ 0.42
DDX39A-207ENST00000588542 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.68■□□□□ 0.42
DDX39A-207ENST00000588542 AMDHD2Q9Y303 409 aa17.68■□□□□ 0.42
DDX39A-207ENST00000588542 A0A096LPE4 126 aa17.67■□□□□ 0.42
DDX39A-207ENST00000588542 A0A1W2PPZ6 126 aa17.67■□□□□ 0.42
DDX39A-207ENST00000588542 DPRXA6NFQ7 191 aa17.67■□□□□ 0.42
DDX39A-207ENST00000588542 SEC14L2O76054 403 aa17.67■□□□□ 0.42
DDX39A-207ENST00000588542 NDUFB2O95178 105 aa17.67■□□□□ 0.42
DDX39A-207ENST00000588542 PLAUP00749 431 aa17.67■□□□□ 0.42
DDX39A-207ENST00000588542 CST1P01037 141 aa17.67■□□□□ 0.42
DDX39A-207ENST00000588542 HOXB6P17509 224 aaKnown RBP17.67■□□□□ 0.42
DDX39A-207ENST00000588542 NR1H2P55055 460 aa17.67■□□□□ 0.42
DDX39A-207ENST00000588542 CLRN1P58418 232 aa17.67■□□□□ 0.42
DDX39A-207ENST00000588542 ERVK-25P63136 954 aa17.67■□□□□ 0.42
DDX39A-207ENST00000588542 FAM122BQ7Z309 247 aa17.67■□□□□ 0.42
DDX39A-207ENST00000588542 HDDC2Q7Z4H3 204 aa17.67■□□□□ 0.42
DDX39A-207ENST00000588542 SYT14Q8NB59 555 aa17.67■□□□□ 0.42
DDX39A-207ENST00000588542 GNPDA2Q8TDQ7 276 aa17.67■□□□□ 0.42
DDX39A-207ENST00000588542 NMD3Q96D46 503 aaKnown RBP17.67■□□□□ 0.42
DDX39A-207ENST00000588542 GPX7Q96SL4 187 aaPredicted RBP17.67■□□□□ 0.42
DDX39A-207ENST00000588542 KCNK17Q96T54 332 aa17.67■□□□□ 0.42
DDX39A-207ENST00000588542 LIME1Q9H400 295 aa17.67■□□□□ 0.42
DDX39A-207ENST00000588542 REEP1Q9H902 201 aa17.67■□□□□ 0.42
DDX39A-207ENST00000588542 CCM2LQ9NUG4 571 aaPredicted RBP17.67■□□□□ 0.42
DDX39A-207ENST00000588542 ADAM18Q9Y3Q7 739 aa17.67■□□□□ 0.42
DDX39A-207ENST00000588542 SAMHD1Q9Y3Z3 626 aaKnown RBP17.67■□□□□ 0.42
DDX39A-207ENST00000588542 U3KQV3 271 aa17.67■□□□□ 0.42
DDX39A-207ENST00000588542 ARPC4-TTLL3A0A0A6YYG9 625 aa17.66■□□□□ 0.42
DDX39A-207ENST00000588542 FKBP6O75344 327 aa17.66■□□□□ 0.42
DDX39A-207ENST00000588542 CD14P08571 375 aa17.66■□□□□ 0.42
DDX39A-207ENST00000588542 QDPRP09417 244 aa17.66■□□□□ 0.42
DDX39A-207ENST00000588542 RPL4P36578 427 aaKnown RBP17.66■□□□□ 0.42
DDX39A-207ENST00000588542 ACVR1BP36896 505 aa17.66■□□□□ 0.42
DDX39A-207ENST00000588542 IFNGR2P38484 337 aa17.66■□□□□ 0.42
DDX39A-207ENST00000588542 ZNF133P52736 654 aaPredicted RBP17.66■□□□□ 0.42
DDX39A-207ENST00000588542 MYBPC1Q00872 1141 aa17.66■□□□□ 0.42
DDX39A-207ENST00000588542 BSPH1Q075Z2 132 aa17.66■□□□□ 0.42
DDX39A-207ENST00000588542 TSPAN31Q12999 210 aa17.66■□□□□ 0.42
DDX39A-207ENST00000588542 C1QTNF12Q5T7M4 302 aa17.66■□□□□ 0.42
DDX39A-207ENST00000588542 LINC00471Q8N535 108 aa17.66■□□□□ 0.42
DDX39A-207ENST00000588542 MCHR2Q969V1 340 aa17.66■□□□□ 0.42
DDX39A-207ENST00000588542 C1QTNF6Q9BXI9 259 aa17.66■□□□□ 0.42
DDX39A-207ENST00000588542 OBP2BQ9NPH6 170 aa17.66■□□□□ 0.42
DDX39A-207ENST00000588542 NRIP3Q9NQ35 241 aa17.66■□□□□ 0.42
DDX39A-207ENST00000588542 STX18Q9P2W9 335 aaKnown RBP17.66■□□□□ 0.42
DDX39A-207ENST00000588542 IL20RAQ9UHF4 553 aa17.66■□□□□ 0.42
DDX39A-207ENST00000588542 POFUT2Q9Y2G5 429 aa17.66■□□□□ 0.42
DDX39A-207ENST00000588542 ZNF503-AS2A6NEH8 195 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms