RNA–Protein interactions for RNA: ENST00000588062.5

TRAPPC6A-204, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2 BASIC

Gene TRAPPC6A, Length 695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-204ENST00000588062 SKA3Q8IX90 412 aa13.37□□□□□ -0.27
TRAPPC6A-204ENST00000588062 OR6X1Q8NH79 312 aa13.37□□□□□ -0.27
TRAPPC6A-204ENST00000588062 FGFBP3Q8TAT2 258 aa13.37□□□□□ -0.27
TRAPPC6A-204ENST00000588062 TMEM54Q969K7 222 aa13.37□□□□□ -0.27
TRAPPC6A-204ENST00000588062 ZNF426Q9BUY5 554 aa13.37□□□□□ -0.27
TRAPPC6A-204ENST00000588062 DENND2DQ9H6A0 471 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC6A-204ENST00000588062 KAT8Q9H7Z6 458 aaKnown RBP13.37□□□□□ -0.27
TRAPPC6A-204ENST00000588062 DYNLRB1Q9NP97 96 aa13.37□□□□□ -0.27
TRAPPC6A-204ENST00000588062 CPSF4LA6NMK7 179 aaKnown RBP13.36□□□□□ -0.27
TRAPPC6A-204ENST00000588062 SYNGR3O43761 229 aa13.36□□□□□ -0.27
TRAPPC6A-204ENST00000588062 CH25HO95992 272 aa13.36□□□□□ -0.27
TRAPPC6A-204ENST00000588062 ERCC1P07992 297 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC6A-204ENST00000588062 PATE4P0C8F1 98 aa13.36□□□□□ -0.27
TRAPPC6A-204ENST00000588062 PTDSS1P48651 473 aaKnown RBP13.36□□□□□ -0.27
TRAPPC6A-204ENST00000588062 CSNK1A1P48729 337 aa13.36□□□□□ -0.27
TRAPPC6A-204ENST00000588062 GZMMP51124 257 aa13.36□□□□□ -0.27
TRAPPC6A-204ENST00000588062 CRYBA2P53672 197 aa13.36□□□□□ -0.27
TRAPPC6A-204ENST00000588062 SRSF2Q01130 221 aaKnown RBP13.36□□□□□ -0.27
TRAPPC6A-204ENST00000588062 CYP51A1Q16850 503 aa13.36□□□□□ -0.27
TRAPPC6A-204ENST00000588062 CR1LQ2VPA4 569 aa13.36□□□□□ -0.27
TRAPPC6A-204ENST00000588062 SLC35D2Q76EJ3 337 aa13.36□□□□□ -0.27
TRAPPC6A-204ENST00000588062 PIWIL3Q7Z3Z3 882 aaKnown RBP13.36□□□□□ -0.27
TRAPPC6A-204ENST00000588062 LRP11Q86VZ4 500 aa13.36□□□□□ -0.27
TRAPPC6A-204ENST00000588062 SNX32Q86XE0 403 aa13.36□□□□□ -0.27
TRAPPC6A-204ENST00000588062 ZNF584Q8IVC4 421 aa13.36□□□□□ -0.27
TRAPPC6A-204ENST00000588062 LRRC17Q8N6Y2 441 aa13.36□□□□□ -0.27
TRAPPC6A-204ENST00000588062 ADAMTS16Q8TE57 1224 aa13.36□□□□□ -0.27
TRAPPC6A-204ENST00000588062 TSPEARQ8WU66 669 aa13.36□□□□□ -0.27
TRAPPC6A-204ENST00000588062 HPS1Q92902 700 aa13.36□□□□□ -0.27
TRAPPC6A-204ENST00000588062 THOC1Q96FV9 657 aaKnown RBP13.36□□□□□ -0.27
TRAPPC6A-204ENST00000588062 C1orf159Q96HA4 380 aa13.36□□□□□ -0.27
TRAPPC6A-204ENST00000588062 TPK1Q9H3S4 243 aa13.36□□□□□ -0.27
TRAPPC6A-204ENST00000588062 GLTPQ9NZD2 209 aa13.36□□□□□ -0.27
TRAPPC6A-204ENST00000588062 SERPINA5P05154 406 aa13.35□□□□□ -0.27
TRAPPC6A-204ENST00000588062 CHN2P52757 468 aa13.35□□□□□ -0.27
TRAPPC6A-204ENST00000588062 SEC24CP53992 1094 aa13.35□□□□□ -0.27
TRAPPC6A-204ENST00000588062 RAB39AQ14964 217 aa13.35□□□□□ -0.27
TRAPPC6A-204ENST00000588062 TRIP10Q15642 601 aa13.35□□□□□ -0.27
TRAPPC6A-204ENST00000588062 TRMT5Q32P41 509 aaKnown RBP13.35□□□□□ -0.27
TRAPPC6A-204ENST00000588062 ELFN2Q5R3F8 820 aa13.35□□□□□ -0.27
TRAPPC6A-204ENST00000588062 PATL1Q86TB9 770 aaKnown RBP13.35□□□□□ -0.27
TRAPPC6A-204ENST00000588062 DYDC1Q8WWB3 177 aa13.35□□□□□ -0.27
TRAPPC6A-204ENST00000588062 TAMM41Q96BW9 452 aa13.35□□□□□ -0.27
TRAPPC6A-204ENST00000588062 PCDHAC1Q9H158 963 aa13.35□□□□□ -0.27
TRAPPC6A-204ENST00000588062 INTS9Q9NV88 658 aaKnown RBP13.35□□□□□ -0.27
TRAPPC6A-204ENST00000588062 MYEF2Q9P2K5 600 aaKnown RBP13.35□□□□□ -0.27
TRAPPC6A-204ENST00000588062 REV1Q9UBZ9 1251 aa13.35□□□□□ -0.27
TRAPPC6A-204ENST00000588062 SLC7A7Q9UM01 511 aa13.35□□□□□ -0.27
TRAPPC6A-204ENST00000588062 SPEF1Q9Y4P9 236 aa13.35□□□□□ -0.27
TRAPPC6A-204ENST00000588062 TENM1Q9UKZ4 2725 aa13.34□□□□□ -0.27
TRAPPC6A-204ENST00000588062 TRAPPC13A5PLN9 417 aa13.34□□□□□ -0.27
TRAPPC6A-204ENST00000588062 ANGPT2O15123 496 aa13.34□□□□□ -0.27
TRAPPC6A-204ENST00000588062 UBL3O95164 117 aa13.34□□□□□ -0.27
TRAPPC6A-204ENST00000588062 OR6A2O95222 327 aa13.34□□□□□ -0.27
TRAPPC6A-204ENST00000588062 HPXP02790 462 aa13.34□□□□□ -0.27
TRAPPC6A-204ENST00000588062 ASAH2BP0C7U1 165 aa13.34□□□□□ -0.27
TRAPPC6A-204ENST00000588062 HNF1AP20823 631 aa13.34□□□□□ -0.27
TRAPPC6A-204ENST00000588062 COL8A2P25067 703 aa13.34□□□□□ -0.27
TRAPPC6A-204ENST00000588062 APEX1P27695 318 aaKnown RBP13.34□□□□□ -0.27
TRAPPC6A-204ENST00000588062 PCGF2P35227 344 aa13.34□□□□□ -0.27
TRAPPC6A-204ENST00000588062 TTC33Q6PID6 262 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC6A-204ENST00000588062 SLC22A24Q8N4F4 322 aa13.34□□□□□ -0.27
TRAPPC6A-204ENST00000588062 LINC01356Q8N9X3 169 aa13.34□□□□□ -0.27
TRAPPC6A-204ENST00000588062 OR10A6Q8NH74 314 aa13.34□□□□□ -0.27
TRAPPC6A-204ENST00000588062 VANGL1Q8TAA9 524 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC6A-204ENST00000588062 SLC25A44Q96H78 314 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC6A-204ENST00000588062 MPP4Q96JB8 637 aa13.34□□□□□ -0.27
TRAPPC6A-204ENST00000588062 MAGEB18Q96M61 343 aa13.34□□□□□ -0.27
TRAPPC6A-204ENST00000588062 SNX18Q96RF0 628 aa13.34□□□□□ -0.27
TRAPPC6A-204ENST00000588062 SYT3Q9BQG1 590 aa13.34□□□□□ -0.27
TRAPPC6A-204ENST00000588062 PRSS27Q9BQR3 290 aa13.34□□□□□ -0.27
TRAPPC6A-204ENST00000588062 SLC19A3Q9BZV2 496 aa13.34□□□□□ -0.27
TRAPPC6A-204ENST00000588062 MS4A5Q9H3V2 200 aa13.34□□□□□ -0.27
TRAPPC6A-204ENST00000588062 MEPEQ9NQ76 525 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC6A-204ENST00000588062 NANSQ9NR45 359 aa13.34□□□□□ -0.27
TRAPPC6A-204ENST00000588062 TMEM38BQ9NVV0 291 aa13.34□□□□□ -0.27
TRAPPC6A-204ENST00000588062 ZNF229Q9UJW7 825 aa13.34□□□□□ -0.27
TRAPPC6A-204ENST00000588062 M0R233 179 aa13.33□□□□□ -0.28
TRAPPC6A-204ENST00000588062 FBP2O00757 339 aa13.33□□□□□ -0.28
TRAPPC6A-204ENST00000588062 DHHO43323 396 aa13.33□□□□□ -0.28
TRAPPC6A-204ENST00000588062 RNF13O43567 381 aa13.33□□□□□ -0.28
TRAPPC6A-204ENST00000588062 RAB36O95755 333 aa13.33□□□□□ -0.28
TRAPPC6A-204ENST00000588062 PGA4P0DJD7 388 aa13.33□□□□□ -0.28
TRAPPC6A-204ENST00000588062 PGA3P0DJD8 388 aa13.33□□□□□ -0.28
TRAPPC6A-204ENST00000588062 OR8G3PP0DMU2 310 aa13.33□□□□□ -0.28
TRAPPC6A-204ENST00000588062 TCN1P20061 433 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC6A-204ENST00000588062 ALDH3B1P43353 468 aa13.33□□□□□ -0.28
TRAPPC6A-204ENST00000588062 CDH15P55291 814 aa13.33□□□□□ -0.28
TRAPPC6A-204ENST00000588062 NFYCQ13952 458 aa13.33□□□□□ -0.28
TRAPPC6A-204ENST00000588062 MELKQ14680 651 aa13.33□□□□□ -0.28
TRAPPC6A-204ENST00000588062 MAD2L1BPQ15013 274 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC6A-204ENST00000588062 HIST3H3Q16695 136 aa13.33□□□□□ -0.28
TRAPPC6A-204ENST00000588062 CCDC80Q76M96 950 aa13.33□□□□□ -0.28
TRAPPC6A-204ENST00000588062 CARM1Q86X55 608 aa13.33□□□□□ -0.28
TRAPPC6A-204ENST00000588062 SLC30A8Q8IWU4 369 aa13.33□□□□□ -0.28
TRAPPC6A-204ENST00000588062 ZNF566Q969W8 418 aa13.33□□□□□ -0.28
TRAPPC6A-204ENST00000588062 C19orf24Q9BVV8 132 aa13.33□□□□□ -0.28
TRAPPC6A-204ENST00000588062 TMEFF2Q9UIK5 374 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC6A-204ENST00000588062 FBXL3Q9UKT7 428 aa13.33□□□□□ -0.28
TRAPPC6A-204ENST00000588062 FZR1Q9UM11 496 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms