RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 TEX29Q8N6K0 151 aa12.04□□□□□ -0.48
DNMT1-213ENST00000587604 GOLGA6L1Q8N7Z2 621 aa12.04□□□□□ -0.48
DNMT1-213ENST00000587604 FAM216AQ8WUB2 273 aa12.04□□□□□ -0.48
DNMT1-213ENST00000587604 FAHD2AQ96GK7 314 aa12.04□□□□□ -0.48
DNMT1-213ENST00000587604 TMEM43Q9BTV4 400 aa12.04□□□□□ -0.48
DNMT1-213ENST00000587604 SLC25A37Q9NYZ2 338 aa12.04□□□□□ -0.48
DNMT1-213ENST00000587604 PCDHB10Q9UN67 800 aa12.04□□□□□ -0.48
DNMT1-213ENST00000587604 TMEM120BA0PK00 339 aa12.03□□□□□ -0.48
DNMT1-213ENST00000587604 TMEM89A2RUT3 159 aa12.03□□□□□ -0.48
DNMT1-213ENST00000587604 PRORSD1PA6NEY8 169 aa12.03□□□□□ -0.48
DNMT1-213ENST00000587604 TPST2O60704 377 aa12.03□□□□□ -0.48
DNMT1-213ENST00000587604 NCR1O76036 304 aa12.03□□□□□ -0.48
DNMT1-213ENST00000587604 PATE4P0C8F1 98 aa12.03□□□□□ -0.48
DNMT1-213ENST00000587604 CSNK1A1P48729 337 aa12.03□□□□□ -0.48
DNMT1-213ENST00000587604 CDH12P55289 794 aa12.03□□□□□ -0.48
DNMT1-213ENST00000587604 RGS8P57771 180 aaPredicted RBP12.03□□□□□ -0.48
DNMT1-213ENST00000587604 SELENOVP59797 346 aa12.03□□□□□ -0.48
DNMT1-213ENST00000587604 ACTG1P63261 375 aa12.03□□□□□ -0.48
DNMT1-213ENST00000587604 MMEL1Q495T6 779 aa12.03□□□□□ -0.48
DNMT1-213ENST00000587604 LRIF1Q5T3J3 769 aa12.03□□□□□ -0.48
DNMT1-213ENST00000587604 SWT1Q5T5J6 900 aaKnown RBP12.03□□□□□ -0.48
DNMT1-213ENST00000587604 C10orf53Q8N6V4 93 aa12.03□□□□□ -0.48
DNMT1-213ENST00000587604 C3orf56Q8N813 242 aa12.03□□□□□ -0.48
DNMT1-213ENST00000587604 BHLHE22Q8NFJ8 381 aaPredicted RBP12.03□□□□□ -0.48
DNMT1-213ENST00000587604 ZBTB9Q96C00 473 aa12.03□□□□□ -0.48
DNMT1-213ENST00000587604 ZMYND19Q96E35 227 aaPredicted RBP12.03□□□□□ -0.48
DNMT1-213ENST00000587604 PARD6BQ9BYG5 372 aa12.03□□□□□ -0.48
DNMT1-213ENST00000587604 GPR160Q9UJ42 338 aa12.03□□□□□ -0.48
DNMT1-213ENST00000587604 GMEB1Q9Y692 573 aa12.03□□□□□ -0.48
DNMT1-213ENST00000587604 SLC22A23A1A5C7 686 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 C17orf100A8MU93 164 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 LRRN3E7EW58 273 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 TRIM77I1YAP6 450 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 WIPF1O43516 503 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 ENTPD5O75356 428 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 SERPINB7O75635 380 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 SERPINI2O75830 405 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 PNPP00491 289 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 MT-ATP6P00846 226 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 ADORA3P0DMS8 318 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 OR8G3PP0DMU2 310 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 PPIBP23284 216 aaKnown RBP12.02□□□□□ -0.49
DNMT1-213ENST00000587604 SLC6A2P23975 617 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 MAGEB1P43366 347 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 SLC18A1P54219 525 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 BIDP55957 195 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 HILS1P60008 231 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 NKPD1Q17RQ9 610 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 RGS7BPQ6MZT1 257 aaPredicted RBP12.02□□□□□ -0.49
DNMT1-213ENST00000587604 ACSM5Q6NUN0 579 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 WDR88Q6ZMY6 472 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 C1orf229Q6ZS94 237 aaPredicted RBP12.02□□□□□ -0.49
DNMT1-213ENST00000587604 PEG10Q86TG7 708 aaKnown RBP12.02□□□□□ -0.49
DNMT1-213ENST00000587604 MSRB3Q8IXL7 192 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 C10orf111Q8N326 155 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 SLC22A24Q8N4F4 322 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 OR5J2Q8NH18 312 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 OR6X1Q8NH79 312 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 SGMS2Q8NHU3 365 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 FGFBP3Q8TAT2 258 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 GCDHQ92947 438 aaPredicted RBP12.02□□□□□ -0.49
DNMT1-213ENST00000587604 TMEM54Q969K7 222 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 JMJD8Q96S16 334 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 ZNF607Q96SK3 696 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 EVA1AQ9H8M9 152 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 SLC52A3Q9NQ40 469 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 G6PC2Q9NQR9 355 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 GLTPQ9NZD2 209 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 SLAMF8Q9P0V8 285 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 TAAR3PQ9P1P4 343 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.02□□□□□ -0.499e-7■□□□□ 10
DNMT1-213ENST00000587604 SLC13A4Q9UKG4 626 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 V9GYY5 206 aaPredicted RBP12.02□□□□□ -0.49
DNMT1-213ENST00000587604 ARHGAP32A7KAX9 2087 aa12.02□□□□□ -0.49
DNMT1-213ENST00000587604 IGLV3-9A0A075B6K5 115 aa12.01□□□□□ -0.49
DNMT1-213ENST00000587604 C11orf98E9PRG8 122 aa12.01□□□□□ -0.49
DNMT1-213ENST00000587604 RGS9O75916 674 aaPredicted RBP12.01□□□□□ -0.49
DNMT1-213ENST00000587604 OR6A2O95222 327 aa12.01□□□□□ -0.49
DNMT1-213ENST00000587604 AVPP01185 164 aa12.01□□□□□ -0.49
DNMT1-213ENST00000587604 ZNF250P15622 560 aa12.01□□□□□ -0.49
DNMT1-213ENST00000587604 EGR1P18146 543 aa12.01□□□□□ -0.49
DNMT1-213ENST00000587604 EPHA1P21709 976 aa12.01□□□□□ -0.49
DNMT1-213ENST00000587604 MRPL19P49406 292 aaKnown RBP12.01□□□□□ -0.49
DNMT1-213ENST00000587604 ARFIP2P53365 341 aa12.01□□□□□ -0.49
DNMT1-213ENST00000587604 SCARB2Q14108 478 aa12.01□□□□□ -0.49
DNMT1-213ENST00000587604 PCGF3Q3KNV8 242 aa12.01□□□□□ -0.49
DNMT1-213ENST00000587604 ALKBH6Q3KRA9 238 aa12.01□□□□□ -0.49
DNMT1-213ENST00000587604 LRFN4Q6PJG9 635 aa12.01□□□□□ -0.49
DNMT1-213ENST00000587604 BLOC1S3Q6QNY0 202 aa12.01□□□□□ -0.49
DNMT1-213ENST00000587604 EPGNQ6UW88 154 aa12.01□□□□□ -0.49
DNMT1-213ENST00000587604 LINC00114Q6XXX2 140 aa12.01□□□□□ -0.49
DNMT1-213ENST00000587604 THSD4Q6ZMP0 1018 aa12.01□□□□□ -0.49
DNMT1-213ENST00000587604 SLC35D2Q76EJ3 337 aa12.01□□□□□ -0.49
DNMT1-213ENST00000587604 RANBP3LQ86VV4 465 aaPredicted RBP12.01□□□□□ -0.49
DNMT1-213ENST00000587604 SLC30A7Q8NEW0 376 aa12.01□□□□□ -0.49
DNMT1-213ENST00000587604 WFDC6Q9BQY6 131 aa12.01□□□□□ -0.49
DNMT1-213ENST00000587604 RBM4Q9BWF3 364 aaKnown RBP12.01□□□□□ -0.49
DNMT1-213ENST00000587604 TMEM38AQ9H6F2 299 aa12.01□□□□□ -0.49
DNMT1-213ENST00000587604 ZNF665Q9H7R5 613 aa12.01□□□□□ -0.49
DNMT1-213ENST00000587604 HINT3Q9NQE9 182 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms