RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 TRGV8A0A0C4DH27 118 aa11.49□□□□□ -0.57
TRIM47-202ENST00000585333 SLC22A31A6NKX4 558 aa11.49□□□□□ -0.57
TRIM47-202ENST00000585333 TGM6O95932 706 aa11.49□□□□□ -0.57
TRIM47-202ENST00000585333 HIST1H1CP16403 213 aaKnown RBP11.49□□□□□ -0.57
TRIM47-202ENST00000585333 CTSSP25774 331 aa11.49□□□□□ -0.57
TRIM47-202ENST00000585333 SH3BGRP55822 239 aaPredicted RBP11.49□□□□□ -0.57
TRIM47-202ENST00000585333 TGFBR3Q03167 851 aa11.49□□□□□ -0.57
TRIM47-202ENST00000585333 POU4F2Q12837 409 aa11.49□□□□□ -0.57
TRIM47-202ENST00000585333 OCLNQ16625 522 aa11.49□□□□□ -0.57
TRIM47-202ENST00000585333 C6orf52Q5T4I8 152 aa11.49□□□□□ -0.57
TRIM47-202ENST00000585333 NXNL2Q5VZ03 156 aa11.49□□□□□ -0.57
TRIM47-202ENST00000585333 ACSM5Q6NUN0 579 aa11.49□□□□□ -0.57
TRIM47-202ENST00000585333 LEG1Q6P5S2 330 aa11.49□□□□□ -0.57
TRIM47-202ENST00000585333 USP51Q70EK9 711 aa11.49□□□□□ -0.57
TRIM47-202ENST00000585333 CXXC5Q7LFL8 322 aaKnown RBP11.49□□□□□ -0.57
TRIM47-202ENST00000585333 KDM8Q8N371 416 aa11.49□□□□□ -0.57
TRIM47-202ENST00000585333 IQCF1Q8N6M8 205 aa11.49□□□□□ -0.57
TRIM47-202ENST00000585333 RND1Q92730 232 aa11.49□□□□□ -0.57
TRIM47-202ENST00000585333 OR2M2Q96R28 347 aa11.49□□□□□ -0.57
TRIM47-202ENST00000585333 KCNK17Q96T54 332 aa11.49□□□□□ -0.57
TRIM47-202ENST00000585333 SLCO5A1Q9H2Y9 848 aa11.49□□□□□ -0.57
TRIM47-202ENST00000585333 MED29Q9NX70 200 aa11.49□□□□□ -0.57
TRIM47-202ENST00000585333 UPB1Q9UBR1 384 aa11.49□□□□□ -0.57
TRIM47-202ENST00000585333 ZNF629Q9UEG4 869 aaPredicted RBP11.49□□□□□ -0.57
TRIM47-202ENST00000585333 LRCH1Q9Y2L9 728 aa11.49□□□□□ -0.57
TRIM47-202ENST00000585333 LRRC42Q9Y546 428 aa11.49□□□□□ -0.57
TRIM47-202ENST00000585333 ZNF814B7Z6K7 855 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 ZNF587BE7ETH6 402 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 DVL2O14641 736 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 TLX2O43763 284 aaPredicted RBP11.48□□□□□ -0.57
TRIM47-202ENST00000585333 KHDRBS3O75525 346 aaKnown RBP11.48□□□□□ -0.57
TRIM47-202ENST00000585333 TRMUO75648 421 aaKnown RBP11.48□□□□□ -0.57
TRIM47-202ENST00000585333 PGA4P0DJD7 388 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 PGA3P0DJD8 388 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 HLA-DOBP13765 273 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 PAX7P23759 505 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 EPHA2P29317 976 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 CEACAM8P31997 349 aaPredicted RBP11.48□□□□□ -0.57
TRIM47-202ENST00000585333 POLR2IP36954 125 aaKnown RBP11.48□□□□□ -0.57
TRIM47-202ENST00000585333 CXCR4P61073 352 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 GLO1Q04760 184 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 MELKQ14680 651 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 NRN1LQ496H8 165 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 MESTQ5EB52 335 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 SLC35F1Q5T1Q4 408 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 TMEM236Q5W0B7 351 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 SSX8Q7RTT4 187 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 TUSC5Q8IXB3 177 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 TCEANCQ8N8B7 351 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 SLC37A3Q8NCC5 494 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 OR4K13Q8NH42 304 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 RHOXF1Q8NHV9 184 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 ASB5Q8WWX0 329 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 RASD2Q96D21 266 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 MUS81Q96NY9 551 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 USB1Q9BQ65 265 aaKnown RBP11.48□□□□□ -0.57
TRIM47-202ENST00000585333 WACQ9BTA9 647 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 MRPL13Q9BYD1 178 aaKnown RBP11.48□□□□□ -0.57
TRIM47-202ENST00000585333 YTHDF1Q9BYJ9 559 aaKnown RBP11.48□□□□□ -0.57
TRIM47-202ENST00000585333 ULBP2Q9BZM5 246 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 RACGAP1Q9H0H5 632 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 ENKD1Q9H0I2 346 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 SCN3BQ9NY72 215 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 GLTPQ9NZD2 209 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 COQ3Q9NZJ6 369 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 WARS2Q9UGM6 360 aaKnown RBP11.48□□□□□ -0.57
TRIM47-202ENST00000585333 PROCRQ9UNN8 238 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 PCDHGB1Q9Y5G3 927 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 FAM215AQ9Y5M1 114 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 KIAA1549Q9HCM3 1950 aa11.48□□□□□ -0.57
TRIM47-202ENST00000585333 SLC22A23A1A5C7 686 aa11.47□□□□□ -0.57
TRIM47-202ENST00000585333 RAMP1O60894 148 aa11.47□□□□□ -0.57
TRIM47-202ENST00000585333 ZNF432O94892 652 aa11.47□□□□□ -0.57
TRIM47-202ENST00000585333 IGFBP1P08833 259 aaPredicted RBP11.47□□□□□ -0.57
TRIM47-202ENST00000585333 GLI4P10075 376 aa11.47□□□□□ -0.57
TRIM47-202ENST00000585333 CD8BP10966 210 aa11.47□□□□□ -0.57
TRIM47-202ENST00000585333 NPR2P20594 1047 aa11.47□□□□□ -0.57
TRIM47-202ENST00000585333 OR3A2P47893 321 aa11.47□□□□□ -0.57
TRIM47-202ENST00000585333 TLE1Q04724 770 aa11.47□□□□□ -0.57
TRIM47-202ENST00000585333 CAMK2DQ13557 499 aa11.47□□□□□ -0.57
TRIM47-202ENST00000585333 CRMP1Q14194 572 aa11.47□□□□□ -0.57
TRIM47-202ENST00000585333 MAD2L1BPQ15013 274 aaPredicted RBP11.47□□□□□ -0.57
TRIM47-202ENST00000585333 GUSBP1Q15486 140 aa11.47□□□□□ -0.57
TRIM47-202ENST00000585333 HIST3H3Q16695 136 aa11.47□□□□□ -0.57
TRIM47-202ENST00000585333 NHLRC1Q6VVB1 395 aa11.47□□□□□ -0.57
TRIM47-202ENST00000585333 BEND4Q6ZU67 534 aa11.47□□□□□ -0.57
TRIM47-202ENST00000585333 C20orf196Q8IYI0 205 aa11.47□□□□□ -0.57
TRIM47-202ENST00000585333 TMEM123Q8N131 208 aa11.47□□□□□ -0.57
TRIM47-202ENST00000585333 MARVELD2Q8N4S9 558 aa11.47□□□□□ -0.57
TRIM47-202ENST00000585333 CNEP1R1Q8N9A8 125 aa11.47□□□□□ -0.57
TRIM47-202ENST00000585333 ZIC4Q8N9L1 334 aa11.47□□□□□ -0.57
TRIM47-202ENST00000585333 C9orf106Q8NAJ2 232 aa11.47□□□□□ -0.57
TRIM47-202ENST00000585333 NPEPL1Q8NDH3 523 aa11.47□□□□□ -0.57
TRIM47-202ENST00000585333 SDR9C7Q8NEX9 313 aa11.47□□□□□ -0.57
TRIM47-202ENST00000585333 TMEM54Q969K7 222 aa11.47□□□□□ -0.57
TRIM47-202ENST00000585333 OTULINQ96BN8 352 aa11.47□□□□□ -0.57
TRIM47-202ENST00000585333 MRPL48Q96GC5 212 aaKnown RBP11.47□□□□□ -0.57
TRIM47-202ENST00000585333 ZNF385AQ96PM9 386 aaKnown RBP11.47□□□□□ -0.57
TRIM47-202ENST00000585333 IL4I1Q96RQ9 567 aa11.47□□□□□ -0.57
TRIM47-202ENST00000585333 NMNAT3Q96T66 252 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms