RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 ARHGEF17Q96PE2 2063 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 TEX15Q9BXT5 2789 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 IGLV3-12A0A075B6K2 115 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 hCG_38984A0A1B0GV85 526 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ANTXRLA6NF34 631 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 HELTA6NFD8 242 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 OR6C65A6NJZ3 312 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 TRPC5OSA6NMA1 111 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF814B7Z6K7 855 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 D6RAR5 112 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 E7EQ34 232 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 BUB3O43684 328 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 BCAS1O75363 584 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CDC123O75794 336 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 PMS2P2O95744 297 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 OXSR1O95747 527 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 WDPCPO95876 746 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 OTCP00480 354 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CGAP01215 116 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 FGGP02679 453 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 S100A9P06702 114 aaKnown RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ACAA1P09110 424 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 THRAP10827 490 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 PRPS2P11908 318 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 GP9P14770 177 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF24P17028 368 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 AMD1P17707 334 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 GALP22466 123 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 HTR2AP28223 471 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 LOXP28300 417 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CASP1P29466 404 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 SRD5A2P31213 254 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 FCGR2BP31994 310 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CEACAM8P31997 349 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 RORAP35398 523 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 RFX3P48380 749 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 EMDP50402 254 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CCL11P51671 97 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CCR8P51685 355 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 PPIAP62937 165 aaKnown RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 TUBA1BP68363 451 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 IL18Q14116 193 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ADPRMQ3LIE5 342 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF672Q499Z4 452 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 SPIN4Q56A73 249 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CARD17Q5XLA6 110 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 LRRC66Q68CR7 880 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ARHGAP11AQ6P4F7 1023 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 TMEM207Q6UWW9 146 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 IGFL3Q6UXB1 125 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 NHLRC1Q6VVB1 395 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 HDDC2Q7Z4H3 204 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 GPR141Q7Z602 305 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ARPINQ7Z6K5 226 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 LUZP2Q86TE4 346 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 C17orf64Q86WR6 236 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 STPG4Q8N801 248 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ZSCAN4Q8NAM6 433 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 MFSD9Q8NBP5 474 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 OR2T12Q8NG77 320 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 OR5T2Q8NGG2 359 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 OR52M1Q8NGK5 317 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CMTM7Q96FZ5 175 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CERS2Q96G23 380 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 C4orf45Q96LM5 186 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 S1PR3Q99500 378 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 KLF6Q99612 283 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 RHOXF2Q9BQY4 288 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 OSBPL10Q9BXB5 764 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 GON7Q9BXV9 100 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 NSRP1Q9H0G5 558 aaKnown RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 RHBGQ9H310 441 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 LPAR2Q9HBW0 351 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 MED4Q9NPJ6 270 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC7A10Q9NS82 523 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 KLRF1Q9NZS2 232 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 PRODH2Q9UF12 536 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 LGALS13Q9UHV8 139 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 GUCA1BQ9UMX6 200 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CCL26Q9Y258 94 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 SLCO1B1Q9Y6L6 691 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 BSNQ9UPA5 3926 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CEP250Q9BV73 2442 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CEP192Q8TEP8 1941 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CACNA1IQ9P0X4 2223 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 A0A0G2JK05 382 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 LOC101059948A0A1B0GTJ6 334 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 A0A1B0GWJ7 208 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 TRABD2BA6NFA1 517 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 FAM159BA6NKW6 160 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 C11orf98E9PRG8 122 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 H3BMH7 237 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 MKRN2OSH3BPM6 223 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 GFYI3L273 518 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 PPP1R2P9O14990 202 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ACOX3O15254 700 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF749O43361 778 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 NSA2O95478 260 aaKnown RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 PAK4O96013 591 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CAPN1P07384 714 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms