RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 A0A0G2JND7 137 aa17.62■□□□□ 0.41
TOP3A-219ENST00000584887 TRAPPC13A5PLN9 417 aa17.62■□□□□ 0.41
TOP3A-219ENST00000584887 HMGB1P1B2RPK0 211 aaPredicted RBP17.62■□□□□ 0.41
TOP3A-219ENST00000584887 LYNX1G3V0Z9 82 aa17.62■□□□□ 0.41
TOP3A-219ENST00000584887 HIST1H2ABP04908 130 aa17.62■□□□□ 0.41
TOP3A-219ENST00000584887 C8BP07358 591 aa17.62■□□□□ 0.41
TOP3A-219ENST00000584887 PATE4P0C8F1 98 aa17.62■□□□□ 0.41
TOP3A-219ENST00000584887 LYNX1P0DP58 116 aa17.62■□□□□ 0.41
TOP3A-219ENST00000584887 ZNF14P17017 642 aaPredicted RBP17.62■□□□□ 0.41
TOP3A-219ENST00000584887 APEX1P27695 318 aaKnown RBP17.62■□□□□ 0.41
TOP3A-219ENST00000584887 LSP1P33241 339 aa17.62■□□□□ 0.41
TOP3A-219ENST00000584887 PCGF2P35227 344 aa17.62■□□□□ 0.41
TOP3A-219ENST00000584887 CHN2P52757 468 aa17.62■□□□□ 0.41
TOP3A-219ENST00000584887 RAB1AP62820 205 aa17.62■□□□□ 0.41
TOP3A-219ENST00000584887 RAB39AQ14964 217 aa17.62■□□□□ 0.41
TOP3A-219ENST00000584887 ZNF74Q16587 644 aa17.62■□□□□ 0.41
TOP3A-219ENST00000584887 MSMPQ1L6U9 139 aa17.62■□□□□ 0.41
TOP3A-219ENST00000584887 HIST3H2AQ7L7L0 130 aa17.62■□□□□ 0.41
TOP3A-219ENST00000584887 SLC30A8Q8IWU4 369 aa17.62■□□□□ 0.41
TOP3A-219ENST00000584887 OR4D11Q8NGI4 311 aa17.62■□□□□ 0.41
TOP3A-219ENST00000584887 OR10A6Q8NH74 314 aa17.62■□□□□ 0.41
TOP3A-219ENST00000584887 HIST1H2ACQ93077 130 aa17.62■□□□□ 0.41
TOP3A-219ENST00000584887 MRPL24Q96A35 216 aaKnown RBP17.62■□□□□ 0.41
TOP3A-219ENST00000584887 SOX7Q9BT81 388 aa17.62■□□□□ 0.41
TOP3A-219ENST00000584887 ZNF385DQ9H6B1 395 aa17.62■□□□□ 0.41
TOP3A-219ENST00000584887 NANSQ9NR45 359 aa17.62■□□□□ 0.41
TOP3A-219ENST00000584887 GLTPQ9NZD2 209 aa17.62■□□□□ 0.41
TOP3A-219ENST00000584887 FZR1Q9UM11 496 aa17.62■□□□□ 0.41
TOP3A-219ENST00000584887 M0R233 179 aa17.61■□□□□ 0.41
TOP3A-219ENST00000584887 UBL3O95164 117 aa17.61■□□□□ 0.41
TOP3A-219ENST00000584887 TCN1P20061 433 aaPredicted RBP17.61■□□□□ 0.41
TOP3A-219ENST00000584887 CD247P20963 164 aa17.61■□□□□ 0.41
TOP3A-219ENST00000584887 GIFP27352 417 aa17.61■□□□□ 0.41
TOP3A-219ENST00000584887 SRSF2Q01130 221 aaKnown RBP17.61■□□□□ 0.41
TOP3A-219ENST00000584887 INTS11Q5TA45 600 aaKnown RBP17.61■□□□□ 0.41
TOP3A-219ENST00000584887 LINC00114Q6XXX2 140 aa17.61■□□□□ 0.41
TOP3A-219ENST00000584887 ZNF627Q7L945 461 aa17.61■□□□□ 0.41
TOP3A-219ENST00000584887 ZNF786Q8N393 782 aa17.61■□□□□ 0.41
TOP3A-219ENST00000584887 LRRC17Q8N6Y2 441 aa17.61■□□□□ 0.41
TOP3A-219ENST00000584887 OR6X1Q8NH79 312 aa17.61■□□□□ 0.41
TOP3A-219ENST00000584887 KAT8Q9H7Z6 458 aaKnown RBP17.61■□□□□ 0.41
TOP3A-219ENST00000584887 ZNF224Q9NZL3 707 aa17.61■□□□□ 0.41
TOP3A-219ENST00000584887 REV1Q9UBZ9 1251 aa17.61■□□□□ 0.41
TOP3A-219ENST00000584887 SYNGR3O43761 229 aa17.6■□□□□ 0.41
TOP3A-219ENST00000584887 LYPD3O95274 346 aa17.6■□□□□ 0.41
TOP3A-219ENST00000584887 THY1P04216 161 aa17.6■□□□□ 0.41
TOP3A-219ENST00000584887 IGFBP1P08833 259 aaPredicted RBP17.6■□□□□ 0.41
TOP3A-219ENST00000584887 ZNF35P13682 527 aa17.6■□□□□ 0.41
TOP3A-219ENST00000584887 IL2RGP31785 369 aa17.6■□□□□ 0.41
TOP3A-219ENST00000584887 ALDH3B1P43353 468 aa17.6■□□□□ 0.41
TOP3A-219ENST00000584887 RPS23P62266 143 aaKnown RBP17.6■□□□□ 0.41
TOP3A-219ENST00000584887 CCNIQ14094 377 aa17.6■□□□□ 0.41
TOP3A-219ENST00000584887 MAD2L1BPQ15013 274 aaPredicted RBP17.6■□□□□ 0.41
TOP3A-219ENST00000584887 CR1LQ2VPA4 569 aa17.6■□□□□ 0.41
TOP3A-219ENST00000584887 NANOGNBQ7Z5D8 188 aa17.6■□□□□ 0.41
TOP3A-219ENST00000584887 TSPYL5Q86VY4 417 aaPredicted RBP17.6■□□□□ 0.41
TOP3A-219ENST00000584887 SKA3Q8IX90 412 aa17.6■□□□□ 0.41
TOP3A-219ENST00000584887 STON2Q8WXE9 905 aa17.6■□□□□ 0.41
TOP3A-219ENST00000584887 TMEM54Q969K7 222 aa17.6■□□□□ 0.41
TOP3A-219ENST00000584887 ZNF566Q969W8 418 aa17.6■□□□□ 0.41
TOP3A-219ENST00000584887 ZNF75AQ96N20 296 aa17.6■□□□□ 0.41
TOP3A-219ENST00000584887 TAS2R5Q9NYW4 299 aa17.6■□□□□ 0.41
TOP3A-219ENST00000584887 A0A1W2PPW3 197 aa17.59■□□□□ 0.41
TOP3A-219ENST00000584887 VIMP08670 466 aaKnown RBP17.59■□□□□ 0.41
TOP3A-219ENST00000584887 GLRXP35754 106 aa17.59■□□□□ 0.41
TOP3A-219ENST00000584887 TRIP10Q15642 601 aa17.59■□□□□ 0.41
TOP3A-219ENST00000584887 KRTAP24-1Q3LI83 254 aa17.59■□□□□ 0.41
TOP3A-219ENST00000584887 HDXQ7Z353 690 aa17.59■□□□□ 0.41
TOP3A-219ENST00000584887 PIWIL3Q7Z3Z3 882 aaKnown RBP17.59■□□□□ 0.41
TOP3A-219ENST00000584887 FGFBP3Q8TAT2 258 aa17.59■□□□□ 0.41
TOP3A-219ENST00000584887 TSPEARQ8WU66 669 aa17.59■□□□□ 0.41
TOP3A-219ENST00000584887 MPP4Q96JB8 637 aa17.59■□□□□ 0.41
TOP3A-219ENST00000584887 SH3GL3Q99963 347 aa17.59■□□□□ 0.41
TOP3A-219ENST00000584887 DENND2DQ9H6A0 471 aaPredicted RBP17.59■□□□□ 0.41
TOP3A-219ENST00000584887 ZNF229Q9UJW7 825 aa17.59■□□□□ 0.41
TOP3A-219ENST00000584887 FBXL3Q9UKT7 428 aa17.59■□□□□ 0.41
TOP3A-219ENST00000584887 BLOC1S5-TXNDC5H3BN57 136 aa17.58■□□□□ 0.4
TOP3A-219ENST00000584887 EDF1O60869 148 aaKnown RBP17.58■□□□□ 0.4
TOP3A-219ENST00000584887 LILRA1O75019 489 aa17.58■□□□□ 0.4
TOP3A-219ENST00000584887 ENTPD5O75356 428 aa17.58■□□□□ 0.4
TOP3A-219ENST00000584887 FARS2O95363 451 aaKnown RBP17.58■□□□□ 0.4
TOP3A-219ENST00000584887 BCL10O95999 233 aa17.58■□□□□ 0.4
TOP3A-219ENST00000584887 OR8G3PP0DMU2 310 aa17.58■□□□□ 0.4
TOP3A-219ENST00000584887 CLRN1P58418 232 aa17.58■□□□□ 0.4
TOP3A-219ENST00000584887 ZP4Q12836 540 aa17.58■□□□□ 0.4
TOP3A-219ENST00000584887 VMACQ2NL98 169 aa17.58■□□□□ 0.4
TOP3A-219ENST00000584887 LRP11Q86VZ4 500 aa17.58■□□□□ 0.4
TOP3A-219ENST00000584887 SLC22A24Q8N4F4 322 aa17.58■□□□□ 0.4
TOP3A-219ENST00000584887 SLC25A44Q96H78 314 aaPredicted RBP17.58■□□□□ 0.4
TOP3A-219ENST00000584887 OR51B6Q9H340 312 aa17.58■□□□□ 0.4
TOP3A-219ENST00000584887 NARFLQ9H6Q4 476 aa17.58■□□□□ 0.4
TOP3A-219ENST00000584887 RNF121Q9H920 327 aa17.58■□□□□ 0.4
TOP3A-219ENST00000584887 TMEM38BQ9NVV0 291 aa17.58■□□□□ 0.4
TOP3A-219ENST00000584887 MYEF2Q9P2K5 600 aaKnown RBP17.58■□□□□ 0.4
TOP3A-219ENST00000584887 DUSP13Q9UII6 198 aa17.58■□□□□ 0.4
TOP3A-219ENST00000584887 MCIDASD6RGH6 385 aa17.57■□□□□ 0.4
TOP3A-219ENST00000584887 DHHO43323 396 aa17.57■□□□□ 0.4
TOP3A-219ENST00000584887 IGHG1P01857 330 aa17.57■□□□□ 0.4
TOP3A-219ENST00000584887 QDPRP09417 244 aa17.57■□□□□ 0.4
TOP3A-219ENST00000584887 TACSTD2P09758 323 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms