RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 KRTAP24-1Q3LI83 254 aa13.66□□□□□ -0.22
SKA2-209ENST00000583976 IQCCQ4KMZ1 466 aa13.66□□□□□ -0.22
SKA2-209ENST00000583976 TMEM225Q6GV28 225 aa13.66□□□□□ -0.22
SKA2-209ENST00000583976 ASRGL1Q7L266 308 aa13.66□□□□□ -0.22
SKA2-209ENST00000583976 GPAT4Q86UL3 456 aa13.66□□□□□ -0.22
SKA2-209ENST00000583976 KDM8Q8N371 416 aa13.66□□□□□ -0.22
SKA2-209ENST00000583976 OR52J3Q8NH60 311 aa13.66□□□□□ -0.22
SKA2-209ENST00000583976 ZNF417Q8TAU3 575 aa13.66□□□□□ -0.22
SKA2-209ENST00000583976 C10orf105Q8TEF2 133 aa13.66□□□□□ -0.22
SKA2-209ENST00000583976 MUS81Q96NY9 551 aa13.66□□□□□ -0.22
SKA2-209ENST00000583976 MOGAT1Q96PD6 335 aa13.66□□□□□ -0.22
SKA2-209ENST00000583976 ZNF587Q96SQ5 575 aaPredicted RBP13.66□□□□□ -0.22
SKA2-209ENST00000583976 ZNF426Q9BUY5 554 aa13.66□□□□□ -0.22
SKA2-209ENST00000583976 MMADHCQ9H3L0 296 aaPredicted RBP13.66□□□□□ -0.22
SKA2-209ENST00000583976 NMNAT1Q9HAN9 279 aaPredicted RBP13.66□□□□□ -0.22
SKA2-209ENST00000583976 IL1RAPQ9NPH3 570 aa13.66□□□□□ -0.22
SKA2-209ENST00000583976 MEPEQ9NQ76 525 aaPredicted RBP13.66□□□□□ -0.22
SKA2-209ENST00000583976 MAN2C1Q9NTJ4 1040 aa13.66□□□□□ -0.22
SKA2-209ENST00000583976 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.65□□□□□ -0.226e-8■■■□□ 16
SKA2-209ENST00000583976 AQP7P3A6NL99 342 aa13.65□□□□□ -0.22
SKA2-209ENST00000583976 GPR171O14626 319 aa13.65□□□□□ -0.22
SKA2-209ENST00000583976 H1F0P07305 194 aaKnown RBP13.65□□□□□ -0.22
SKA2-209ENST00000583976 SLC25A16P16260 332 aa13.65□□□□□ -0.22
SKA2-209ENST00000583976 IGFBP5P24593 272 aa13.65□□□□□ -0.22
SKA2-209ENST00000583976 RBM34P42696 430 aaKnown RBP13.65□□□□□ -0.22
SKA2-209ENST00000583976 IL1RL1Q01638 556 aa13.65□□□□□ -0.22
SKA2-209ENST00000583976 CHRNB3Q05901 458 aa13.65□□□□□ -0.22
SKA2-209ENST00000583976 LGALS3BPQ08380 585 aa13.65□□□□□ -0.22
SKA2-209ENST00000583976 RAB35Q15286 201 aa13.65□□□□□ -0.22
SKA2-209ENST00000583976 HIKESHIQ53FT3 197 aa13.65□□□□□ -0.22
SKA2-209ENST00000583976 FGD3Q5JSP0 725 aa13.65□□□□□ -0.22
SKA2-209ENST00000583976 ZNF544Q6NX49 715 aa13.65□□□□□ -0.22
SKA2-209ENST00000583976 TBPL2Q6SJ96 375 aa13.65□□□□□ -0.22
SKA2-209ENST00000583976 SSX8Q7RTT4 187 aa13.65□□□□□ -0.22
SKA2-209ENST00000583976 MEX3DQ86XN8 651 aaKnown RBP13.65□□□□□ -0.22
SKA2-209ENST00000583976 LRRC17Q8N6Y2 441 aa13.65□□□□□ -0.22
SKA2-209ENST00000583976 PIK3C3Q8NEB9 887 aa13.65□□□□□ -0.22
SKA2-209ENST00000583976 FAM168AQ92567 244 aa13.65□□□□□ -0.22
SKA2-209ENST00000583976 ASPNQ9BXN1 380 aa13.65□□□□□ -0.22
SKA2-209ENST00000583976 SLC17A5Q9NRA2 495 aa13.65□□□□□ -0.22
SKA2-209ENST00000583976 C20orf141Q9NUB4 165 aa13.65□□□□□ -0.22
SKA2-209ENST00000583976 CDC42EP3Q9UKI2 254 aa13.65□□□□□ -0.22
SKA2-209ENST00000583976 AURKCQ9UQB9 309 aa13.65□□□□□ -0.22
SKA2-209ENST00000583976 MED31Q9Y3C7 131 aa13.65□□□□□ -0.22
SKA2-209ENST00000583976 HEATR1Q9H583 2144 aaKnown RBP13.64□□□□□ -0.23
SKA2-209ENST00000583976 A0A087WUU8 490 aa13.64□□□□□ -0.23
SKA2-209ENST00000583976 AQP12BA6NM10 295 aa13.64□□□□□ -0.23
SKA2-209ENST00000583976 UMPSP11172 480 aa13.64□□□□□ -0.23
SKA2-209ENST00000583976 NQO1P15559 274 aaKnown RBP13.64□□□□□ -0.23
SKA2-209ENST00000583976 CDH2P19022 906 aaPredicted RBP13.64□□□□□ -0.23
SKA2-209ENST00000583976 P2RY4P51582 365 aa13.64□□□□□ -0.23
SKA2-209ENST00000583976 SPIBQ01892 262 aa13.64□□□□□ -0.23
SKA2-209ENST00000583976 PMS2P3Q13401 168 aa13.64□□□□□ -0.23
SKA2-209ENST00000583976 ZNF74Q16587 644 aa13.64□□□□□ -0.23
SKA2-209ENST00000583976 FAM98BQ52LJ0 330 aaKnown RBP13.64□□□□□ -0.23
SKA2-209ENST00000583976 ZNF730Q6ZMV8 503 aa13.64□□□□□ -0.23
SKA2-209ENST00000583976 H1FNTQ75WM6 255 aaPredicted RBP13.64□□□□□ -0.23
SKA2-209ENST00000583976 RRM2BQ7LG56 351 aa13.64□□□□□ -0.23
SKA2-209ENST00000583976 AQP12AQ8IXF9 295 aa13.64□□□□□ -0.23
SKA2-209ENST00000583976 C1orf162Q8NEQ5 155 aaPredicted RBP13.64□□□□□ -0.23
SKA2-209ENST00000583976 OR6S1Q8NH40 331 aa13.64□□□□□ -0.23
SKA2-209ENST00000583976 CANT1Q8WVQ1 401 aa13.64□□□□□ -0.23
SKA2-209ENST00000583976 TMEM158Q8WZ71 300 aa13.64□□□□□ -0.23
SKA2-209ENST00000583976 ZNF385AQ96PM9 386 aaKnown RBP13.64□□□□□ -0.23
SKA2-209ENST00000583976 SORCS2Q96PQ0 1159 aa13.64□□□□□ -0.23
SKA2-209ENST00000583976 ALKBH3Q96Q83 286 aaPredicted RBP13.64□□□□□ -0.23
SKA2-209ENST00000583976 KCNK17Q96T54 332 aa13.64□□□□□ -0.23
SKA2-209ENST00000583976 SLC19A3Q9BZV2 496 aa13.64□□□□□ -0.23
SKA2-209ENST00000583976 CHODLQ9H9P2 273 aa13.64□□□□□ -0.23
SKA2-209ENST00000583976 UPB1Q9UBR1 384 aa13.64□□□□□ -0.23
SKA2-209ENST00000583976 MOKQ9UQ07 419 aa13.64□□□□□ -0.23
SKA2-209ENST00000583976 DHRS12A0PJE2 317 aa13.63□□□□□ -0.23
SKA2-209ENST00000583976 GADD45GO95257 159 aa13.63□□□□□ -0.23
SKA2-209ENST00000583976 MT-ATP6P00846 226 aa13.63□□□□□ -0.23
SKA2-209ENST00000583976 IFI30P13284 250 aa13.63□□□□□ -0.23
SKA2-209ENST00000583976 RRM2P31350 389 aa13.63□□□□□ -0.23
SKA2-209ENST00000583976 DSCR9P59020 149 aa13.63□□□□□ -0.23
SKA2-209ENST00000583976 GGTLC2Q14390 218 aa13.63□□□□□ -0.23
SKA2-209ENST00000583976 SLC17A1Q14916 467 aa13.63□□□□□ -0.23
SKA2-209ENST00000583976 MFSD13AQ14CX5 517 aa13.63□□□□□ -0.23
SKA2-209ENST00000583976 C1orf146Q5VVC0 180 aa13.63□□□□□ -0.23
SKA2-209ENST00000583976 OR7E24Q6IFN5 339 aa13.63□□□□□ -0.23
SKA2-209ENST00000583976 NRMQ8IXM6 262 aa13.63□□□□□ -0.23
SKA2-209ENST00000583976 ADGRG5Q8IZF4 528 aa13.63□□□□□ -0.23
SKA2-209ENST00000583976 C17orf78Q8N4C9 275 aa13.63□□□□□ -0.23
SKA2-209ENST00000583976 OR9K2Q8NGE7 335 aa13.63□□□□□ -0.23
SKA2-209ENST00000583976 SLC7A13Q8TCU3 470 aa13.63□□□□□ -0.23
SKA2-209ENST00000583976 ACOT11Q8WXI4 607 aaPredicted RBP13.63□□□□□ -0.23
SKA2-209ENST00000583976 UTP4Q969X6 686 aaKnown RBP13.63□□□□□ -0.23
SKA2-209ENST00000583976 FBXO17Q96EF6 278 aa13.63□□□□□ -0.23
SKA2-209ENST00000583976 SGTBQ96EQ0 304 aa13.63□□□□□ -0.23
SKA2-209ENST00000583976 ZNF347Q96SE7 839 aa13.63□□□□□ -0.23
SKA2-209ENST00000583976 MAGIXQ9H6Y5 334 aa13.63□□□□□ -0.23
SKA2-209ENST00000583976 SEC61A2Q9H9S3 476 aa13.63□□□□□ -0.23
SKA2-209ENST00000583976 NANSQ9NR45 359 aa13.63□□□□□ -0.23
SKA2-209ENST00000583976 RASD1Q9Y272 281 aa13.63□□□□□ -0.23
SKA2-209ENST00000583976 AMDHD2Q9Y303 409 aa13.63□□□□□ -0.23
SKA2-209ENST00000583976 CORINQ9Y5Q5 1042 aa13.63□□□□□ -0.23
SKA2-209ENST00000583976 TRBV4-1A0A0J9YWV2 114 aa13.62□□□□□ -0.23
SKA2-209ENST00000583976 A0A1W2PRQ8 180 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms