RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 CHI3L2Q15782 390 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 ZBTB6Q15916 424 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 NRF1Q16656 503 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 PIGGQ5H8A4 983 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 OR6B2Q6IFH4 312 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 CATSPER4Q7RTX7 472 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 RALGPS2Q86X27 583 aaPredicted RBP2.05□□□□□ -2.08
COPS3-217ENST00000583160 ZNF615Q8N8J6 731 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 OR8H1Q8NGG4 311 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 PIBF1Q8WXW3 757 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 FGF13Q92913 245 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 FGF14Q92915 247 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 TCEANC2Q96MN5 208 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 CCDC43Q96MW1 224 aaKnown RBP2.05□□□□□ -2.08
COPS3-217ENST00000583160 GAL3ST1Q99999 423 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 SLC30A2Q9BRI3 323 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 LXNQ9BS40 222 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 TIPINQ9BVW5 301 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 SYTL2Q9HCH5 934 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 LHX9Q9NQ69 397 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 INPP5EQ9NRR6 644 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 MTRRQ9UBK8 725 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 KIF25Q9UIL4 384 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 PIN4Q9Y237 131 aaKnown RBP2.05□□□□□ -2.08
COPS3-217ENST00000583160 GINS2Q9Y248 185 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 RNF6Q9Y252 685 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 SF3B1O75533 1304 aaKnown RBP eCLIP2.05□□□□□ -2.08
COPS3-217ENST00000583160 TNRC6BQ9UPQ9 1833 aaKnown RBP2.05□□□□□ -2.08
COPS3-217ENST00000583160 SCN1AP35498 2009 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 CACNA1EQ15878 2313 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 MYBPHLA2RUH7 354 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 CFAP73A6NFT4 308 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 SLC9B1P1A6NJY1 282 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 CHADO15335 359 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 HCRTR1O43613 425 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 TRAPPC3O43617 180 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 ERLIN2O94905 339 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 P04436 131 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 ALPPP05187 535 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 CHTF8P0CG12 524 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 PNMA6AP0CW24 399 aaPredicted RBP2.04□□□□□ -2.08
COPS3-217ENST00000583160 PSMC3P17980 439 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 U2AF2P26368 475 aaKnown RBP eCLIP2.04□□□□□ -2.08
COPS3-217ENST00000583160 CYLC1P35663 651 aaPredicted RBP2.04□□□□□ -2.08
COPS3-217ENST00000583160 PRPHP41219 470 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 HELZP42694 1942 aaKnown RBP2.04□□□□□ -2.08
COPS3-217ENST00000583160 NAMPTP43490 491 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 ATXN3P54252 364 aaPredicted RBP2.04□□□□□ -2.08
COPS3-217ENST00000583160 NCBP1Q09161 790 aaKnown RBP2.04□□□□□ -2.08
COPS3-217ENST00000583160 SMARCB1Q12824 385 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 PSMD5Q16401 504 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 MAPK6Q16659 721 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 FAM83EQ2M2I3 478 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 CCDC40Q4G0X9 1142 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 FAHD2BQ6P2I3 314 aaPredicted RBP2.04□□□□□ -2.08
COPS3-217ENST00000583160 UNC5DQ6UXZ4 953 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 CFAP47Q6ZTR5 3102 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 ACOT7LQ6ZUV0 252 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 APTXQ7Z2E3 356 aaKnown RBP2.04□□□□□ -2.08
COPS3-217ENST00000583160 ANKRD37Q7Z713 158 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 MFSD6LQ8IWD5 586 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 CD302Q8IX05 232 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 GCNT2Q8N0V5 402 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 DAW1Q8N136 415 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 OR10G2Q8NGC3 310 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 CEP192Q8TEP8 1941 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 KIFAP3Q92845 792 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 FAHD2AQ96GK7 314 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 NSMCE2Q96MF7 247 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 VSTM2LQ96N03 204 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 ZNF578Q96N58 590 aaPredicted RBP2.04□□□□□ -2.08
COPS3-217ENST00000583160 TSG101Q99816 390 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 SPIN2AQ99865 258 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 SPIN2BQ9BPZ2 258 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 LLPHQ9BRT6 129 aaKnown RBP2.04□□□□□ -2.08
COPS3-217ENST00000583160 TBCDQ9BTW9 1192 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 MFSD1Q9H3U5 465 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 C8orf33Q9H7E9 229 aaPredicted RBP2.04□□□□□ -2.08
COPS3-217ENST00000583160 EPG5Q9HCE0 2579 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 WARS2Q9UGM6 360 aaKnown RBP2.04□□□□□ -2.08
COPS3-217ENST00000583160 OARD1Q9Y530 152 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 ASB3Q9Y575 518 aa2.04□□□□□ -2.08
COPS3-217ENST00000583160 NCOR2Q9Y618 2525 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 MAP1BP46821 2468 aaKnown RBP2.03□□□□□ -2.08
COPS3-217ENST00000583160 ASCC3Q8N3C0 2202 aaKnown RBP2.03□□□□□ -2.08
COPS3-217ENST00000583160 TCHHQ07283 1943 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 IGHV3OR16-13A0A075B7E8 117 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 KIF2AO00139 706 aaPredicted RBP2.03□□□□□ -2.08
COPS3-217ENST00000583160 PIRO00625 290 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 TRDMT1O14717 391 aaKnown RBP2.03□□□□□ -2.08
COPS3-217ENST00000583160 CPLX1O14810 134 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 B4GALT5O43286 388 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 NEMFO60524 1076 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 TOM1L1O75674 476 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 GNA14O95837 355 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 ZNF806P0C7X5 589 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 MCF2P10911 925 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 UQCRC2P22695 453 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 CCR2P41597 374 aa2.03□□□□□ -2.08
COPS3-217ENST00000583160 OR1G1P47890 313 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms