RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 HINT3Q9NQE9 182 aaKnown RBP13.78□□□□□ -0.2
SREBF1-221ENST00000583080 THUMPD1Q9NXG2 353 aaKnown RBP13.78□□□□□ -0.2
SREBF1-221ENST00000583080 CORINQ9Y5Q5 1042 aa13.78□□□□□ -0.2
SREBF1-221ENST00000583080 CACNG2Q9Y698 323 aa13.78□□□□□ -0.2
SREBF1-221ENST00000583080 TRRAPQ9Y4A5 3859 aa13.77□□□□□ -0.2
SREBF1-221ENST00000583080 TMPRSS2O15393 492 aa13.77□□□□□ -0.21
SREBF1-221ENST00000583080 TPST1O60507 370 aa13.77□□□□□ -0.21
SREBF1-221ENST00000583080 IGHV2-5P01817 119 aa13.77□□□□□ -0.21
SREBF1-221ENST00000583080 SERPINA5P05154 406 aa13.77□□□□□ -0.21
SREBF1-221ENST00000583080 KITP10721 976 aa13.77□□□□□ -0.21
SREBF1-221ENST00000583080 BMP2P12643 396 aa13.77□□□□□ -0.21
SREBF1-221ENST00000583080 IDO1P14902 403 aa13.77□□□□□ -0.21
SREBF1-221ENST00000583080 HOXB9P17482 250 aaPredicted RBP13.77□□□□□ -0.21
SREBF1-221ENST00000583080 PRKAR1BP31321 381 aa13.77□□□□□ -0.21
SREBF1-221ENST00000583080 LSP1P33241 339 aa13.77□□□□□ -0.21
SREBF1-221ENST00000583080 CSNK1A1P48729 337 aa13.77□□□□□ -0.21
SREBF1-221ENST00000583080 UBA52P62987 128 aaKnown RBP13.77□□□□□ -0.21
SREBF1-221ENST00000583080 GLO1Q04760 184 aa13.77□□□□□ -0.21
SREBF1-221ENST00000583080 PMS2P3Q13401 168 aa13.77□□□□□ -0.21
SREBF1-221ENST00000583080 NXNQ6DKJ4 435 aa13.77□□□□□ -0.21
SREBF1-221ENST00000583080 WDR88Q6ZMY6 472 aa13.77□□□□□ -0.21
SREBF1-221ENST00000583080 C10orf111Q8N326 155 aa13.77□□□□□ -0.21
SREBF1-221ENST00000583080 BPIFB2Q8N4F0 458 aa13.77□□□□□ -0.21
SREBF1-221ENST00000583080 TEX29Q8N6K0 151 aa13.77□□□□□ -0.21
SREBF1-221ENST00000583080 WFDC6Q9BQY6 131 aa13.77□□□□□ -0.21
SREBF1-221ENST00000583080 PAIP1Q9H074 479 aaKnown RBP13.77□□□□□ -0.21
SREBF1-221ENST00000583080 RMND5AQ9H871 391 aa13.77□□□□□ -0.21
SREBF1-221ENST00000583080 MRPL39Q9NYK5 338 aaKnown RBP13.77□□□□□ -0.21
SREBF1-221ENST00000583080 WIPI2Q9Y4P8 454 aa13.77□□□□□ -0.21
SREBF1-221ENST00000583080 IGLV3-9A0A075B6K5 115 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 A0A0B4J2E0 115 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 A0A1B0GX12 115 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 ZNF726A6NNF4 738 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 C5orf58C9J3I9 102 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 PLPP3O14495 311 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 HDAC3O15379 428 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 RGS16O15492 202 aaPredicted RBP13.76□□□□□ -0.21
SREBF1-221ENST00000583080 FSHBP01225 129 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 ETS2P15036 469 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 ANPEPP15144 967 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 AHCYP23526 432 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 BIDP55957 195 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 KLF3P57682 345 aaPredicted RBP13.76□□□□□ -0.21
SREBF1-221ENST00000583080 FAM91A1Q658Y4 838 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 TMEM154Q6P9G4 183 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 ULK3Q6PHR2 472 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 SLC2A7Q6PXP3 512 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 MSANTD1Q6ZTZ1 278 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 MAVSQ7Z434 540 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 SLC30A7Q8NEW0 376 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 OR6S1Q8NH40 331 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 NFKBIDQ8NI38 313 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 GTF2H4Q92759 462 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 RAB39BQ96DA2 213 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 SLC47A1Q96FL8 570 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 EPYCQ99645 322 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 SH3GL3Q99963 347 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 PAIP2Q9BPZ3 127 aaKnown RBP13.76□□□□□ -0.21
SREBF1-221ENST00000583080 SDR39U1Q9NRG7 319 aaPredicted RBP13.76□□□□□ -0.21
SREBF1-221ENST00000583080 ZIM2Q9NZV7 527 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 TESQ9UGI8 421 aaKnown RBP13.76□□□□□ -0.21
SREBF1-221ENST00000583080 OPN4Q9UHM6 478 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 FBXL3Q9UKT7 428 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 PPIAL4AQ9Y536 164 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 ARHGAP32A7KAX9 2087 aa13.76□□□□□ -0.21
SREBF1-221ENST00000583080 IGHV1-69-2A0A0G2JMI3 117 aa13.75□□□□□ -0.21
SREBF1-221ENST00000583080 TRPC5OSA6NMA1 111 aa13.75□□□□□ -0.21
SREBF1-221ENST00000583080 C11orf98E9PRG8 122 aa13.75□□□□□ -0.21
SREBF1-221ENST00000583080 CLIC1O00299 241 aa13.75□□□□□ -0.21
SREBF1-221ENST00000583080 TPST2O60704 377 aa13.75□□□□□ -0.21
SREBF1-221ENST00000583080 ZNF250P15622 560 aa13.75□□□□□ -0.21
SREBF1-221ENST00000583080 CRYBB2P43320 205 aa13.75□□□□□ -0.21
SREBF1-221ENST00000583080 POLR2JP52435 117 aaKnown RBP13.75□□□□□ -0.21
SREBF1-221ENST00000583080 RBBP4Q09028 425 aa13.75□□□□□ -0.21
SREBF1-221ENST00000583080 ZP4Q12836 540 aa13.75□□□□□ -0.21
SREBF1-221ENST00000583080 FADDQ13158 208 aa13.75□□□□□ -0.21
SREBF1-221ENST00000583080 OR1Q1Q15612 314 aa13.75□□□□□ -0.21
SREBF1-221ENST00000583080 DCAF12L2Q5VW00 463 aa13.75□□□□□ -0.21
SREBF1-221ENST00000583080 DHRS4L2Q6PKH6 230 aa13.75□□□□□ -0.21
SREBF1-221ENST00000583080 USP51Q70EK9 711 aa13.75□□□□□ -0.21
SREBF1-221ENST00000583080 PXKQ7Z7A4 578 aa13.75□□□□□ -0.21
SREBF1-221ENST00000583080 SNX32Q86XE0 403 aa13.75□□□□□ -0.21
SREBF1-221ENST00000583080 SLC22A24Q8N4F4 322 aa13.75□□□□□ -0.21
SREBF1-221ENST00000583080 C10orf53Q8N6V4 93 aa13.75□□□□□ -0.21
SREBF1-221ENST00000583080 NANPQ8TBE9 248 aa13.75□□□□□ -0.21
SREBF1-221ENST00000583080 SYNPRQ8TBG9 265 aa13.75□□□□□ -0.21
SREBF1-221ENST00000583080 SNX33Q8WV41 574 aa13.75□□□□□ -0.21
SREBF1-221ENST00000583080 TMEM54Q969K7 222 aa13.75□□□□□ -0.21
SREBF1-221ENST00000583080 MAELQ96JY0 434 aaKnown RBP13.75□□□□□ -0.21
SREBF1-221ENST00000583080 ZNF747Q9BV97 191 aa13.75□□□□□ -0.21
SREBF1-221ENST00000583080 C1QTNF5Q9BXJ0 243 aa13.75□□□□□ -0.21
SREBF1-221ENST00000583080 TMEM38BQ9NVV0 291 aa13.75□□□□□ -0.21
SREBF1-221ENST00000583080 SLC25A37Q9NYZ2 338 aa13.75□□□□□ -0.21
SREBF1-221ENST00000583080 J3QLI3 93 aa13.74□□□□□ -0.21
SREBF1-221ENST00000583080 PRSS23O95084 383 aa13.74□□□□□ -0.21
SREBF1-221ENST00000583080 BCL10O95999 233 aa13.74□□□□□ -0.21
SREBF1-221ENST00000583080 LCKP06239 509 aa13.74□□□□□ -0.21
SREBF1-221ENST00000583080 ARAFP10398 606 aa13.74□□□□□ -0.21
SREBF1-221ENST00000583080 CDH12P55289 794 aa13.74□□□□□ -0.21
SREBF1-221ENST00000583080 RGS8P57771 180 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms