RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 OMGP23515 440 aa10.8□□□□□ -0.68
SS18-219ENST00000581570 PCGF2P35227 344 aa10.8□□□□□ -0.68
SS18-219ENST00000581570 CLNS1AP54105 237 aaKnown RBP10.8□□□□□ -0.68
SS18-219ENST00000581570 ERVS71-1P61550 626 aa10.8□□□□□ -0.68
SS18-219ENST00000581570 SRSF4Q08170 494 aaKnown RBP10.8□□□□□ -0.68
SS18-219ENST00000581570 ZNF154Q13106 437 aa10.8□□□□□ -0.68
SS18-219ENST00000581570 DPY19L1Q2PZI1 675 aa10.8□□□□□ -0.68
SS18-219ENST00000581570 SKA3Q8IX90 412 aa10.8□□□□□ -0.68
SS18-219ENST00000581570 MIER2Q8N344 545 aa10.8□□□□□ -0.68
SS18-219ENST00000581570 SLC30A7Q8NEW0 376 aa10.8□□□□□ -0.68
SS18-219ENST00000581570 FGFBP3Q8TAT2 258 aa10.8□□□□□ -0.68
SS18-219ENST00000581570 GTF3AQ92664 365 aaKnown RBP10.8□□□□□ -0.68
SS18-219ENST00000581570 SLC38A4Q969I6 547 aa10.8□□□□□ -0.68
SS18-219ENST00000581570 TXNDC15Q96J42 360 aa10.8□□□□□ -0.68
SS18-219ENST00000581570 ZIM3Q96PE6 472 aa10.8□□□□□ -0.68
SS18-219ENST00000581570 PANX1Q96RD7 426 aa10.8□□□□□ -0.68
SS18-219ENST00000581570 CCT8L2Q96SF2 557 aa10.8□□□□□ -0.68
SS18-219ENST00000581570 SPATA9Q9BWV2 254 aa10.8□□□□□ -0.68
SS18-219ENST00000581570 MS4A7Q9GZW8 240 aaPredicted RBP10.8□□□□□ -0.68
SS18-219ENST00000581570 ARMC7Q9H6L4 198 aa10.8□□□□□ -0.68
SS18-219ENST00000581570 CDH20Q9HBT6 801 aa10.8□□□□□ -0.68
SS18-219ENST00000581570 CALML5Q9NZT1 146 aa10.8□□□□□ -0.68
SS18-219ENST00000581570 PDP1Q9P0J1 537 aaPredicted RBP10.8□□□□□ -0.68
SS18-219ENST00000581570 SLC17A7Q9P2U7 560 aa10.8□□□□□ -0.68
SS18-219ENST00000581570 RPS6KB2Q9UBS0 482 aa10.8□□□□□ -0.68
SS18-219ENST00000581570 TESQ9UGI8 421 aaKnown RBP10.8□□□□□ -0.68
SS18-219ENST00000581570 PURGQ9UJV8 347 aaKnown RBP10.8□□□□□ -0.68
SS18-219ENST00000581570 CHST2Q9Y4C5 530 aa10.8□□□□□ -0.68
SS18-219ENST00000581570 MMP24Q9Y5R2 645 aa10.8□□□□□ -0.68
SS18-219ENST00000581570 VWFP04275 2813 aa10.8□□□□□ -0.68
SS18-219ENST00000581570 HPRP00739 348 aa10.79□□□□□ -0.68
SS18-219ENST00000581570 OR8G3PP0DMU2 310 aa10.79□□□□□ -0.68
SS18-219ENST00000581570 CCL2P13500 99 aa10.79□□□□□ -0.68
SS18-219ENST00000581570 NQO1P15559 274 aaKnown RBP10.79□□□□□ -0.68
SS18-219ENST00000581570 DRD4P21917 467 aa10.79□□□□□ -0.68
SS18-219ENST00000581570 CDKN2CP42773 168 aa10.79□□□□□ -0.68
SS18-219ENST00000581570 MTNR1AP48039 350 aa10.79□□□□□ -0.68
SS18-219ENST00000581570 HOXC5Q00444 222 aa10.79□□□□□ -0.68
SS18-219ENST00000581570 SLC3A1Q07837 685 aa10.79□□□□□ -0.68
SS18-219ENST00000581570 SWT1Q5T5J6 900 aaKnown RBP10.79□□□□□ -0.68
SS18-219ENST00000581570 C16orf87Q6PH81 154 aa10.79□□□□□ -0.68
SS18-219ENST00000581570 C5orf46Q6UWT4 87 aa10.79□□□□□ -0.68
SS18-219ENST00000581570 C17orf107Q6ZR85 190 aa10.79□□□□□ -0.68
SS18-219ENST00000581570 SPATC1Q76KD6 591 aa10.79□□□□□ -0.68
SS18-219ENST00000581570 PIWIL3Q7Z3Z3 882 aaKnown RBP10.79□□□□□ -0.68
SS18-219ENST00000581570 PAQR4Q8N4S7 273 aaPredicted RBP10.79□□□□□ -0.68
SS18-219ENST00000581570 ICA1LQ8NDH6 482 aa10.79□□□□□ -0.68
SS18-219ENST00000581570 ADPRHL1Q8NDY3 354 aa10.79□□□□□ -0.68
SS18-219ENST00000581570 TRIM44Q96DX7 344 aaPredicted RBP10.79□□□□□ -0.68
SS18-219ENST00000581570 APOPT1Q96IL0 206 aa10.79□□□□□ -0.68
SS18-219ENST00000581570 MMP27Q9H306 513 aa10.79□□□□□ -0.68
SS18-219ENST00000581570 PPCSQ9HAB8 311 aa10.79□□□□□ -0.68
SS18-219ENST00000581570 CACYBPQ9HB71 228 aaKnown RBP10.79□□□□□ -0.68
SS18-219ENST00000581570 MKS1Q9NXB0 559 aa10.79□□□□□ -0.68
SS18-219ENST00000581570 P2RX2Q9UBL9 471 aa10.79□□□□□ -0.68
SS18-219ENST00000581570 TRAV36DV7A0A075B6V5 113 aa10.78□□□□□ -0.68
SS18-219ENST00000581570 A0A087WUJ7 227 aa10.78□□□□□ -0.68
SS18-219ENST00000581570 A0A1B0GUS0 222 aa10.78□□□□□ -0.68
SS18-219ENST00000581570 E9PBE3 544 aa10.78□□□□□ -0.68
SS18-219ENST00000581570 TRAPPC2LH3BP13 241 aa10.78□□□□□ -0.68
SS18-219ENST00000581570 M0QZ24 198 aa10.78□□□□□ -0.68
SS18-219ENST00000581570 ZNF500O60304 480 aaPredicted RBP10.78□□□□□ -0.68
SS18-219ENST00000581570 KRT75O95678 551 aa10.78□□□□□ -0.68
SS18-219ENST00000581570 GPANK1O95872 356 aa10.78□□□□□ -0.68
SS18-219ENST00000581570 BCHEP06276 602 aa10.78□□□□□ -0.68
SS18-219ENST00000581570 ZNF81P51508 661 aa10.78□□□□□ -0.68
SS18-219ENST00000581570 CRISP3P54108 245 aa10.78□□□□□ -0.68
SS18-219ENST00000581570 UCP2P55851 309 aa10.78□□□□□ -0.68
SS18-219ENST00000581570 GLO1Q04760 184 aa10.78□□□□□ -0.68
SS18-219ENST00000581570 FAM209AQ5JX71 171 aa10.78□□□□□ -0.68
SS18-219ENST00000581570 C6orf89Q6UWU4 347 aa10.78□□□□□ -0.68
SS18-219ENST00000581570 NHLRC1Q6VVB1 395 aa10.78□□□□□ -0.68
SS18-219ENST00000581570 SLC22A24Q8N4F4 322 aa10.78□□□□□ -0.68
SS18-219ENST00000581570 KIR3DL3Q8N743 410 aa10.78□□□□□ -0.68
SS18-219ENST00000581570 EPS8L3Q8TE67 593 aaKnown RBP10.78□□□□□ -0.68
SS18-219ENST00000581570 MRI1Q9BV20 369 aa10.78□□□□□ -0.68
SS18-219ENST00000581570 RNF121Q9H920 327 aa10.78□□□□□ -0.68
SS18-219ENST00000581570 C12orf10Q9HB07 376 aa10.78□□□□□ -0.68
SS18-219ENST00000581570 IFT52Q9Y366 437 aa10.78□□□□□ -0.68
SS18-219ENST00000581570 WNK2Q9Y3S1 2297 aa10.77□□□□□ -0.69
SS18-219ENST00000581570 SPRY3O43610 288 aa10.77□□□□□ -0.69
SS18-219ENST00000581570 UBOX5O94941 541 aa10.77□□□□□ -0.69
SS18-219ENST00000581570 IGHV1-46P01743 117 aa10.77□□□□□ -0.69
SS18-219ENST00000581570 IGHV3-13P01766 116 aa10.77□□□□□ -0.69
SS18-219ENST00000581570 IGHMP01871 453 aa10.77□□□□□ -0.69
SS18-219ENST00000581570 SBK2P0C263 348 aa10.77□□□□□ -0.69
SS18-219ENST00000581570 ETFAP13804 333 aa10.77□□□□□ -0.69
SS18-219ENST00000581570 ZNF12P17014 697 aa10.77□□□□□ -0.69
SS18-219ENST00000581570 CSNK1A1P48729 337 aa10.77□□□□□ -0.69
SS18-219ENST00000581570 NME5P56597 212 aa10.77□□□□□ -0.69
SS18-219ENST00000581570 TBC1D28Q2M2D7 210 aa10.77□□□□□ -0.69
SS18-219ENST00000581570 RPS26P11Q5JNZ5 115 aaPredicted RBP10.77□□□□□ -0.69
SS18-219ENST00000581570 TMEM53Q6P2H8 277 aa10.77□□□□□ -0.69
SS18-219ENST00000581570 JAZF1Q86VZ6 243 aa10.77□□□□□ -0.69
SS18-219ENST00000581570 OR1J2Q8NGS2 313 aa10.77□□□□□ -0.69
SS18-219ENST00000581570 SLC38A5Q8WUX1 472 aa10.77□□□□□ -0.69
SS18-219ENST00000581570 UBLCP1Q8WVY7 318 aaPredicted RBP10.77□□□□□ -0.69
SS18-219ENST00000581570 WFDC12Q8WWY7 111 aa10.77□□□□□ -0.69
SS18-219ENST00000581570 SLC41A3Q96GZ6 507 aa10.77□□□□□ -0.69
SS18-219ENST00000581570 SH3GL3Q99963 347 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms