RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 EVPLLA8MZ36 301 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 UBL3O95164 117 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 RAB36O95755 333 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 TCN1P20061 433 aaPredicted RBP9.09□□□□□ -0.95
RFFL-209ENST00000581265 AHCYP23526 432 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 ALDH3B1P43353 468 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 GPR6P46095 362 aaPredicted RBP9.09□□□□□ -0.95
RFFL-209ENST00000581265 CSNK1A1P48729 337 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 IDH3AP50213 366 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 ACTG1P63261 375 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 DEFA6Q01524 100 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 ZP4Q12836 540 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 RAB39AQ14964 217 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 GKAP1Q5VSY0 366 aaPredicted RBP9.09□□□□□ -0.95
RFFL-209ENST00000581265 ZNF613Q6PF04 617 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 LRFN4Q6PJG9 635 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 WDR88Q6ZMY6 472 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 GLCCI1Q86VQ1 547 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 RANBP3LQ86VV4 465 aaPredicted RBP9.09□□□□□ -0.95
RFFL-209ENST00000581265 ARMC8Q8IUR7 673 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 ZNF584Q8IVC4 421 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 C10orf53Q8N6V4 93 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 HIPK4Q8NE63 616 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 OR5J2Q8NH18 312 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 OR6X1Q8NH79 312 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 CLDND2Q8NHS1 167 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 ZFAND2BQ8WV99 257 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 TMEM54Q969K7 222 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 TMEM186Q96B77 213 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 C7orf26Q96N11 449 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 IKZF5Q9H5V7 419 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 ZNF385DQ9H6B1 395 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 HIF1ANQ9NWT6 349 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 TAS2R5Q9NYW4 299 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 GLTPQ9NZD2 209 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 CCDC167Q9P0B6 97 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 MYEF2Q9P2K5 600 aaKnown RBP9.09□□□□□ -0.95
RFFL-209ENST00000581265 DUSP13Q9UII6 198 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 ZNF346Q9UL40 294 aaKnown RBP9.09□□□□□ -0.95
RFFL-209ENST00000581265 CORO2BQ9UQ03 480 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 MEGF8Q7Z7M0 2845 aa9.09□□□□□ -0.95
RFFL-209ENST00000581265 FAM157AC9JC47 383 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 WNT9BO14905 357 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 POLR3GO15318 223 aaPredicted RBP9.08□□□□□ -0.96
RFFL-209ENST00000581265 CHP2O43745 196 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 ENTPD5O75356 428 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 RP2O75695 350 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 VENTXO95231 258 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 TFP02787 698 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 MSMBP08118 114 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 PATE4P0C8F1 98 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 ADORA3P0DMS8 318 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 OR8G3PP0DMU2 310 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 SAGP10523 405 aaPredicted RBP9.08□□□□□ -0.96
RFFL-209ENST00000581265 AQP1P29972 269 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 LSP1P33241 339 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 BIDP55957 195 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 PCBP3P57721 371 aaKnown RBP9.08□□□□□ -0.96
RFFL-209ENST00000581265 LMO4P61968 165 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 MAD2L1BPQ15013 274 aaPredicted RBP9.08□□□□□ -0.96
RFFL-209ENST00000581265 DUSP7Q16829 419 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 DLEU7Q6UYE1 221 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 RINLQ6ZS11 566 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 SLC35D2Q76EJ3 337 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 SLC22A24Q8N4F4 322 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 FGFBP3Q8TAT2 258 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 YIPF5Q969M3 257 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 MCHR1Q99705 422 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 EBF4Q9BQW3 602 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 CCDC28BQ9BUN5 200 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 ZNF416Q9BWM5 594 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 OCEL1Q9H607 264 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 METTL17Q9H7H0 456 aaPredicted RBP9.08□□□□□ -0.96
RFFL-209ENST00000581265 TMBIM4Q9HC24 238 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 ZNF275Q9NSD4 429 aaPredicted RBP9.08□□□□□ -0.96
RFFL-209ENST00000581265 TREM2Q9NZC2 230 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 SLC7A8Q9UHI5 535 aa9.08□□□□□ -0.96
RFFL-209ENST00000581265 IGLV3-9A0A075B6K5 115 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 SLC22A23A1A5C7 686 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 M0QX08 132 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 DHHO43323 396 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 ERLIN1O75477 346 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 SERPINI2O75830 405 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 NCR1O76036 304 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 OR6A2O95222 327 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 LYPD3O95274 346 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 GAAP10253 952 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 NAT2P11245 290 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 ZNF250P15622 560 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 SELENOVP59797 346 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 RBBP4Q09028 425 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 SCGB2A2Q13296 93 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 ZNF74Q16587 644 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 MMEL1Q495T6 779 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 NRN1LQ496H8 165 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 RUNDC3AQ59EK9 446 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 DPPA2Q7Z7J5 298 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 PTOV1Q86YD1 416 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 SMYD1Q8NB12 490 aa9.07□□□□□ -0.96
RFFL-209ENST00000581265 C11orf65Q8NCR3 313 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms