RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 ANKRD34AQ69YU3 496 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 DNM1P34Q6PK57 102 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 FAM122BQ7Z309 247 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 NUFIP2Q7Z417 695 aaKnown RBP12.66□□□□□ -0.38
SKA2-205ENST00000580541 MRGPRGQ86SM5 289 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 DEPDC4Q8N2C3 294 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 MARVELD2Q8N4S9 558 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 CA5BP1Q8WTZ4 195 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 TRUB1Q8WWH5 349 aaKnown RBP12.66□□□□□ -0.38
SKA2-205ENST00000580541 STARD4Q96DR4 205 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 Q96M85 177 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 TSPAN32Q96QS1 320 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 OR2M2Q96R28 347 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 APOL4Q9BPW4 351 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 EMC6Q9BV81 110 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 PLA2G12AQ9BZM1 189 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 GRIP2Q9C0E4 1043 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 TOR3AQ9H497 397 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 C12orf49Q9H741 205 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 ASB6Q9NWX5 421 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 RNF6Q9Y252 685 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 ADAM18Q9Y3Q7 739 aa12.66□□□□□ -0.38
SKA2-205ENST00000580541 TEX13CA0A0J9YWL9 993 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 LOC100130705A0A1B0GUX0 176 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 PRSS37A4D1T9 235 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 ZNF587BE7ETH6 402 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 H0YAE9 185 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 J3QKU1 62 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 SLC16A6O15403 523 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 MPZL2O60487 215 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 TRMUO75648 421 aaKnown RBP12.65□□□□□ -0.38
SKA2-205ENST00000580541 SNAP29O95721 258 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 BMP5P22003 454 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 CRABP1P29762 137 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 SELENOPP49908 381 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 TGFBR3Q03167 851 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 CD47Q08722 323 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 FOXF2Q12947 444 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 MELKQ14680 651 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 STK11Q15831 433 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 SNAPC1Q16533 368 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 SLC35F1Q5T1Q4 408 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 SLX4IPQ5VYV7 408 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 BTLAQ7Z6A9 289 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 C20orf196Q8IYI0 205 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 OR52E2Q8NGJ4 325 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 OR8D4Q8NGM9 314 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 LILRB4Q8NHJ6 448 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 ZNF519Q8TB69 540 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 CCDC120Q96HB5 630 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 HRASLS5Q96KN8 279 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 USB1Q9BQ65 265 aaKnown RBP12.65□□□□□ -0.38
SKA2-205ENST00000580541 HDHD5Q9BXW7 423 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 CMC2Q9NRP2 79 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 FAM118AQ9NWS6 357 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 IMPAD1Q9NX62 359 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 ELOVL5Q9NYP7 299 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 TVP23BQ9NYZ1 205 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 GLTPQ9NZD2 209 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 H2AFY2Q9P0M6 372 aaPredicted RBP12.65□□□□□ -0.38
SKA2-205ENST00000580541 RALYQ9UKM9 306 aaKnown RBP12.65□□□□□ -0.38
SKA2-205ENST00000580541 GMPPBQ9Y5P6 360 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 CHD6Q8TD26 2715 aa12.65□□□□□ -0.38
SKA2-205ENST00000580541 IGFBP1P08833 259 aaPredicted RBP12.64□□□□□ -0.39
SKA2-205ENST00000580541 PGA4P0DJD7 388 aa12.64□□□□□ -0.39
SKA2-205ENST00000580541 PGA3P0DJD8 388 aa12.64□□□□□ -0.39
SKA2-205ENST00000580541 HIST1H1CP16403 213 aaKnown RBP12.64□□□□□ -0.39
SKA2-205ENST00000580541 CENPAP49450 140 aa12.64□□□□□ -0.39
SKA2-205ENST00000580541 ZNF84P51523 738 aa12.64□□□□□ -0.39
SKA2-205ENST00000580541 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.64□□□□□ -0.39
SKA2-205ENST00000580541 IL18R1Q13478 541 aa12.64□□□□□ -0.39
SKA2-205ENST00000580541 KEAP1Q14145 624 aa12.64□□□□□ -0.39
SKA2-205ENST00000580541 P2RY6Q15077 328 aa12.64□□□□□ -0.39
SKA2-205ENST00000580541 CARD17Q5XLA6 110 aa12.64□□□□□ -0.39
SKA2-205ENST00000580541 ACSM5Q6NUN0 579 aa12.64□□□□□ -0.39
SKA2-205ENST00000580541 VWA1Q6PCB0 445 aa12.64□□□□□ -0.39
SKA2-205ENST00000580541 TFAP2EQ6VUC0 442 aa12.64□□□□□ -0.39
SKA2-205ENST00000580541 Q6ZT83 130 aa12.64□□□□□ -0.39
SKA2-205ENST00000580541 TMEM123Q8N131 208 aa12.64□□□□□ -0.39
SKA2-205ENST00000580541 ZNF808Q8N4W9 903 aaPredicted RBP12.64□□□□□ -0.39
SKA2-205ENST00000580541 NAXEQ8NCW5 288 aa12.64□□□□□ -0.39
SKA2-205ENST00000580541 SETD9Q8NE22 299 aa12.64□□□□□ -0.39
SKA2-205ENST00000580541 NOXO1Q8NFA2 376 aa12.64□□□□□ -0.39
SKA2-205ENST00000580541 OR4K13Q8NH42 304 aa12.64□□□□□ -0.39
SKA2-205ENST00000580541 NRG4Q8WWG1 115 aa12.64□□□□□ -0.39
SKA2-205ENST00000580541 CYGBQ8WWM9 190 aa12.64□□□□□ -0.39
SKA2-205ENST00000580541 TMEM54Q969K7 222 aa12.64□□□□□ -0.39
SKA2-205ENST00000580541 RASD2Q96D21 266 aa12.64□□□□□ -0.39
SKA2-205ENST00000580541 KCNK17Q96T54 332 aa12.64□□□□□ -0.39
SKA2-205ENST00000580541 MRPL13Q9BYD1 178 aaKnown RBP12.64□□□□□ -0.39
SKA2-205ENST00000580541 ULBP2Q9BZM5 246 aa12.64□□□□□ -0.39
SKA2-205ENST00000580541 FN3KQ9H479 309 aa12.64□□□□□ -0.39
SKA2-205ENST00000580541 KCNJ16Q9NPI9 418 aa12.64□□□□□ -0.39
SKA2-205ENST00000580541 FOXD3Q9UJU5 478 aaPredicted RBP12.64□□□□□ -0.39
SKA2-205ENST00000580541 SLC22A23A1A5C7 686 aa12.63□□□□□ -0.39
SKA2-205ENST00000580541 SNTNA6NMZ2 147 aa12.63□□□□□ -0.39
SKA2-205ENST00000580541 EEF1E1-BLOC1S5C9J1V9 151 aa12.63□□□□□ -0.39
SKA2-205ENST00000580541 PRR23D1E9PI22 279 aaPredicted RBP12.63□□□□□ -0.39
SKA2-205ENST00000580541 RPL36A-HNRNPH2H7BZ11 118 aa12.63□□□□□ -0.39
SKA2-205ENST00000580541 SURF4O15260 269 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms