RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 FAM107BQ9H098 131 aa17.51■□□□□ 0.39
SMG8-204ENST00000580498 KCNN2Q9H2S1 579 aa17.51■□□□□ 0.39
SMG8-204ENST00000580498 ZNF442Q9H7R0 627 aa17.51■□□□□ 0.39
SMG8-204ENST00000580498 MYOZ1Q9NP98 299 aaPredicted RBP17.51■□□□□ 0.39
SMG8-204ENST00000580498 INIPQ9NRY2 104 aa17.51■□□□□ 0.39
SMG8-204ENST00000580498 TAS2R5Q9NYW4 299 aa17.51■□□□□ 0.39
SMG8-204ENST00000580498 CXCR6O00574 342 aa17.5■□□□□ 0.39
SMG8-204ENST00000580498 MGRN1O60291 552 aa17.5■□□□□ 0.39
SMG8-204ENST00000580498 SHOX2O60902 331 aaPredicted RBP17.5■□□□□ 0.39
SMG8-204ENST00000580498 LYPD3O95274 346 aa17.5■□□□□ 0.39
SMG8-204ENST00000580498 THY1P04216 161 aa17.5■□□□□ 0.39
SMG8-204ENST00000580498 OR8G3PP0DMU2 310 aa17.5■□□□□ 0.39
SMG8-204ENST00000580498 B4GALT1P15291 398 aa17.5■□□□□ 0.39
SMG8-204ENST00000580498 TNFRSF1BP20333 461 aa17.5■□□□□ 0.39
SMG8-204ENST00000580498 SLC7A2P52569 658 aa17.5■□□□□ 0.39
SMG8-204ENST00000580498 CRYBA2P53672 197 aa17.5■□□□□ 0.39
SMG8-204ENST00000580498 RPS23P62266 143 aaKnown RBP17.5■□□□□ 0.39
SMG8-204ENST00000580498 TAF11Q15544 211 aa17.5■□□□□ 0.39
SMG8-204ENST00000580498 IFI44LQ53G44 452 aa17.5■□□□□ 0.39
SMG8-204ENST00000580498 ZNF627Q7L945 461 aa17.5■□□□□ 0.39
SMG8-204ENST00000580498 SLC15A3Q8IY34 581 aa17.5■□□□□ 0.39
SMG8-204ENST00000580498 TMEM255BQ8WV15 326 aa17.5■□□□□ 0.39
SMG8-204ENST00000580498 FAM162AQ96A26 154 aa17.5■□□□□ 0.39
SMG8-204ENST00000580498 VRK1Q99986 396 aaPredicted RBP17.5■□□□□ 0.39
SMG8-204ENST00000580498 KCTD14Q9BQ13 255 aaPredicted RBP17.5■□□□□ 0.39
SMG8-204ENST00000580498 PRSS27Q9BQR3 290 aa17.5■□□□□ 0.39
SMG8-204ENST00000580498 RAB1BQ9H0U4 201 aa17.5■□□□□ 0.39
SMG8-204ENST00000580498 RPS6KA6Q9UK32 745 aa17.5■□□□□ 0.39
SMG8-204ENST00000580498 NDUFS7O75251 213 aa17.49■□□□□ 0.39
SMG8-204ENST00000580498 PTHP01270 115 aa17.49■□□□□ 0.39
SMG8-204ENST00000580498 OR4A8P0C604 315 aa17.49■□□□□ 0.39
SMG8-204ENST00000580498 NPR2P20594 1047 aa17.49■□□□□ 0.39
SMG8-204ENST00000580498 GUCA1AP43080 201 aaPredicted RBP17.49■□□□□ 0.39
SMG8-204ENST00000580498 PTDSS1P48651 473 aaKnown RBP17.49■□□□□ 0.39
SMG8-204ENST00000580498 DAG1Q14118 895 aa17.49■□□□□ 0.39
SMG8-204ENST00000580498 PHYHD1Q5SRE7 291 aa17.49■□□□□ 0.39
SMG8-204ENST00000580498 GKAP1Q5VSY0 366 aaPredicted RBP17.49■□□□□ 0.39
SMG8-204ENST00000580498 TMEM53Q6P2H8 277 aa17.49■□□□□ 0.39
SMG8-204ENST00000580498 NKAIN4Q8IVV8 208 aa17.49■□□□□ 0.39
SMG8-204ENST00000580498 LRRC17Q8N6Y2 441 aa17.49■□□□□ 0.39
SMG8-204ENST00000580498 TMEM54Q969K7 222 aa17.49■□□□□ 0.39
SMG8-204ENST00000580498 ZNF837Q96EG3 531 aaPredicted RBP17.49■□□□□ 0.39
SMG8-204ENST00000580498 MEPEQ9NQ76 525 aaPredicted RBP17.49■□□□□ 0.39
SMG8-204ENST00000580498 CMTM6Q9NX76 183 aa17.49■□□□□ 0.39
SMG8-204ENST00000580498 HIVEP2P31629 2446 aa17.48■□□□□ 0.39
SMG8-204ENST00000580498 DHHO43323 396 aa17.48■□□□□ 0.39
SMG8-204ENST00000580498 F12P00748 615 aaPredicted RBP17.48■□□□□ 0.39
SMG8-204ENST00000580498 HLA-HP01893 362 aa17.48■□□□□ 0.39
SMG8-204ENST00000580498 SAGP10523 405 aaPredicted RBP17.48■□□□□ 0.39
SMG8-204ENST00000580498 PRDX6P30041 224 aa17.48■□□□□ 0.39
SMG8-204ENST00000580498 PDLIM4P50479 330 aa17.48■□□□□ 0.39
SMG8-204ENST00000580498 UGT2B15P54855 530 aa17.48■□□□□ 0.39
SMG8-204ENST00000580498 RAB1AP62820 205 aa17.48■□□□□ 0.39
SMG8-204ENST00000580498 RPL18Q07020 188 aaKnown RBP17.48■□□□□ 0.39
SMG8-204ENST00000580498 PIGFQ07326 219 aa17.48■□□□□ 0.39
SMG8-204ENST00000580498 MELKQ14680 651 aa17.48■□□□□ 0.39
SMG8-204ENST00000580498 TRAM2Q15035 370 aa17.48■□□□□ 0.39
SMG8-204ENST00000580498 EFNB3Q15768 340 aa17.48■□□□□ 0.39
SMG8-204ENST00000580498 ANKDD1AQ495B1 522 aa17.48■□□□□ 0.39
SMG8-204ENST00000580498 SLC36A2Q495M3 483 aa17.48■□□□□ 0.39
SMG8-204ENST00000580498 PFN4Q8NHR9 129 aa17.48■□□□□ 0.39
SMG8-204ENST00000580498 FNDC8Q8TC99 324 aa17.48■□□□□ 0.39
SMG8-204ENST00000580498 LRMDAQ9H2I8 198 aa17.48■□□□□ 0.39
SMG8-204ENST00000580498 C1orf198Q9H425 327 aa17.48■□□□□ 0.39
SMG8-204ENST00000580498 PLK3Q9H4B4 646 aa17.48■□□□□ 0.39
SMG8-204ENST00000580498 RNF121Q9H920 327 aa17.48■□□□□ 0.39
SMG8-204ENST00000580498 DYNLRB1Q9NP97 96 aa17.48■□□□□ 0.39
SMG8-204ENST00000580498 FAM32AQ9Y421 112 aaKnown RBP17.48■□□□□ 0.39
SMG8-204ENST00000580498 CMAHPQ9Y471 501 aa17.48■□□□□ 0.39
SMG8-204ENST00000580498 IGHV2OR16-5A0A0B4J2B6 119 aa17.47■□□□□ 0.39
SMG8-204ENST00000580498 QDPRP09417 244 aa17.47■□□□□ 0.39
SMG8-204ENST00000580498 IFI30P13284 250 aa17.47■□□□□ 0.39
SMG8-204ENST00000580498 HOXB4P17483 251 aaPredicted RBP17.47■□□□□ 0.39
SMG8-204ENST00000580498 PCSK6P29122 969 aa17.47■□□□□ 0.39
SMG8-204ENST00000580498 PPOXP50336 477 aa17.47■□□□□ 0.39
SMG8-204ENST00000580498 PLP2Q04941 152 aa17.47■□□□□ 0.39
SMG8-204ENST00000580498 SNTB2Q13425 540 aaKnown RBP17.47■□□□□ 0.39
SMG8-204ENST00000580498 SWI5Q1ZZU3 235 aa17.47■□□□□ 0.39
SMG8-204ENST00000580498 NRN1LQ496H8 165 aa17.47■□□□□ 0.39
SMG8-204ENST00000580498 OFCC1Q8IZS5 231 aa17.47■□□□□ 0.39
SMG8-204ENST00000580498 SLC22A24Q8N4F4 322 aa17.47■□□□□ 0.39
SMG8-204ENST00000580498 NOXO1Q8NFA2 376 aa17.47■□□□□ 0.39
SMG8-204ENST00000580498 LIPHQ8WWY8 451 aa17.47■□□□□ 0.39
SMG8-204ENST00000580498 BPIFA2Q96DR5 249 aa17.47■□□□□ 0.39
SMG8-204ENST00000580498 SPAG4Q9NPE6 437 aa17.47■□□□□ 0.39
SMG8-204ENST00000580498 KRCC1Q9NPI7 259 aaPredicted RBP17.47■□□□□ 0.39
SMG8-204ENST00000580498 ZNF469Q96JG9 3925 aaPredicted RBP17.46■□□□□ 0.39
SMG8-204ENST00000580498 SLC22A23A1A5C7 686 aa17.46■□□□□ 0.39
SMG8-204ENST00000580498 hCG_2039718K7EN88 272 aa17.46■□□□□ 0.39
SMG8-204ENST00000580498 NDUFS8O00217 210 aa17.46■□□□□ 0.39
SMG8-204ENST00000580498 TLX2O43763 284 aaPredicted RBP17.46■□□□□ 0.39
SMG8-204ENST00000580498 SERPINA1P01009 418 aa17.46■□□□□ 0.39
SMG8-204ENST00000580498 F13BP05160 661 aa17.46■□□□□ 0.39
SMG8-204ENST00000580498 CELA3BP08861 270 aa17.46■□□□□ 0.39
SMG8-204ENST00000580498 PGA4P0DJD7 388 aa17.46■□□□□ 0.39
SMG8-204ENST00000580498 PGA3P0DJD8 388 aa17.46■□□□□ 0.39
SMG8-204ENST00000580498 ACADSP16219 412 aa17.46■□□□□ 0.39
SMG8-204ENST00000580498 CALCRP30988 508 aa17.46■□□□□ 0.39
SMG8-204ENST00000580498 GIPRP48546 466 aa17.46■□□□□ 0.39
SMG8-204ENST00000580498 GSK3BP49841 420 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms