RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 STK11Q15831 433 aa16.93■□□□□ 0.3
LIMD2-209ENST00000580222 ZNF239Q16600 458 aaKnown RBP16.93■□□□□ 0.3
LIMD2-209ENST00000580222 CR1LQ2VPA4 569 aa16.93■□□□□ 0.3
LIMD2-209ENST00000580222 ZNF730Q6ZMV8 503 aa16.93■□□□□ 0.3
LIMD2-209ENST00000580222 RRM2BQ7LG56 351 aa16.93■□□□□ 0.3
LIMD2-209ENST00000580222 C10orf67Q8IYJ2 551 aa16.93■□□□□ 0.3
LIMD2-209ENST00000580222 C10orf53Q8N6V4 93 aa16.93■□□□□ 0.3
LIMD2-209ENST00000580222 PFN4Q8NHR9 129 aa16.93■□□□□ 0.3
LIMD2-209ENST00000580222 RNF128Q8TEB7 428 aa16.93■□□□□ 0.3
LIMD2-209ENST00000580222 PYDC1Q8WXC3 89 aa16.93■□□□□ 0.3
LIMD2-209ENST00000580222 ACOT11Q8WXI4 607 aaPredicted RBP16.93■□□□□ 0.3
LIMD2-209ENST00000580222 SLC25A36Q96CQ1 311 aa16.93■□□□□ 0.3
LIMD2-209ENST00000580222 DUS3LQ96G46 650 aaKnown RBP16.93■□□□□ 0.3
LIMD2-209ENST00000580222 PTDSS2Q9BVG9 487 aa16.93■□□□□ 0.3
LIMD2-209ENST00000580222 REEP1Q9H902 201 aa16.93■□□□□ 0.3
LIMD2-209ENST00000580222 AP4S1Q9Y587 144 aa16.93■□□□□ 0.3
LIMD2-209ENST00000580222 A0A087WUU8 490 aa16.92■□□□□ 0.3
LIMD2-209ENST00000580222 IGHV4-61A0A0C4DH41 118 aa16.92■□□□□ 0.3
LIMD2-209ENST00000580222 TRBV4-1A0A0J9YWV2 114 aa16.92■□□□□ 0.3
LIMD2-209ENST00000580222 LIPT2A6NK58 231 aa16.92■□□□□ 0.3
LIMD2-209ENST00000580222 TNFRSF11BO00300 401 aa16.92■□□□□ 0.3
LIMD2-209ENST00000580222 OR2T1O43869 369 aa16.92■□□□□ 0.3
LIMD2-209ENST00000580222 PIP5K1CO60331 668 aa16.92■□□□□ 0.3
LIMD2-209ENST00000580222 RAC3P60763 192 aa16.92■□□□□ 0.3
LIMD2-209ENST00000580222 SLC35A1P78382 337 aa16.92■□□□□ 0.3
LIMD2-209ENST00000580222 PPA1Q15181 289 aa16.92■□□□□ 0.3
LIMD2-209ENST00000580222 RFLNBQ8N5W9 214 aa16.92■□□□□ 0.3
LIMD2-209ENST00000580222 MFSD8Q8NHS3 518 aa16.92■□□□□ 0.3
LIMD2-209ENST00000580222 SLC7A13Q8TCU3 470 aa16.92■□□□□ 0.3
LIMD2-209ENST00000580222 TAAR8Q969N4 342 aa16.92■□□□□ 0.3
LIMD2-209ENST00000580222 DHRS9Q9BPW9 319 aa16.92■□□□□ 0.3
LIMD2-209ENST00000580222 KRCC1Q9NPI7 259 aaPredicted RBP16.92■□□□□ 0.3
LIMD2-209ENST00000580222 ARMC1Q9NVT9 282 aa16.92■□□□□ 0.3
LIMD2-209ENST00000580222 PRSS50Q9UI38 385 aa16.92■□□□□ 0.3
LIMD2-209ENST00000580222 TMCC3Q9ULS5 477 aa16.92■□□□□ 0.3
LIMD2-209ENST00000580222 TRAPPC4Q9Y296 219 aa16.92■□□□□ 0.3
LIMD2-209ENST00000580222 SAMHD1Q9Y3Z3 626 aaKnown RBP16.92■□□□□ 0.3
LIMD2-209ENST00000580222 LYVE1Q9Y5Y7 322 aa16.92■□□□□ 0.3
LIMD2-209ENST00000580222 PLCE1Q9P212 2302 aa16.91■□□□□ 0.3
LIMD2-209ENST00000580222 IGHV3-15A0A0B4J1V0 119 aa16.91■□□□□ 0.3
LIMD2-209ENST00000580222 H7C417 338 aa16.91■□□□□ 0.3
LIMD2-209ENST00000580222 DNPH1O43598 174 aa16.91■□□□□ 0.3
LIMD2-209ENST00000580222 KRT36O76013 467 aa16.91■□□□□ 0.3
LIMD2-209ENST00000580222 ENPP1P22413 925 aa16.91■□□□□ 0.3
LIMD2-209ENST00000580222 CBLP22681 906 aa16.91■□□□□ 0.3
LIMD2-209ENST00000580222 TMEM201Q5SNT2 666 aa16.91■□□□□ 0.3
LIMD2-209ENST00000580222 ZFP1Q6P2D0 407 aa16.91■□□□□ 0.3
LIMD2-209ENST00000580222 MBOAT2Q6ZWT7 520 aa16.91■□□□□ 0.3
LIMD2-209ENST00000580222 NRMQ8IXM6 262 aa16.91■□□□□ 0.3
LIMD2-209ENST00000580222 PIAS4Q8N2W9 510 aaPredicted RBP16.91■□□□□ 0.3
LIMD2-209ENST00000580222 MUC15Q8N387 334 aa16.91■□□□□ 0.3
LIMD2-209ENST00000580222 OR6S1Q8NH40 331 aa16.91■□□□□ 0.3
LIMD2-209ENST00000580222 STMN2Q93045 179 aa16.91■□□□□ 0.3
LIMD2-209ENST00000580222 SGTBQ96EQ0 304 aa16.91■□□□□ 0.3
LIMD2-209ENST00000580222 MEPEQ9NQ76 525 aaPredicted RBP16.91■□□□□ 0.3
LIMD2-209ENST00000580222 VNN3Q9NY84 501 aa16.91■□□□□ 0.3
LIMD2-209ENST00000580222 KLHL13Q9P2N7 655 aa16.91■□□□□ 0.3
LIMD2-209ENST00000580222 ING1Q9UK53 422 aaPredicted RBP16.91■□□□□ 0.3
LIMD2-209ENST00000580222 U3KQV3 271 aa16.91■□□□□ 0.3
LIMD2-209ENST00000580222 FTCDNL1E5RQL4 147 aa16.9■□□□□ 0.3
LIMD2-209ENST00000580222 LRRN3E7EW58 273 aa16.9■□□□□ 0.3
LIMD2-209ENST00000580222 EIF1BO60739 113 aaKnown RBP16.9■□□□□ 0.3
LIMD2-209ENST00000580222 ENTPD5O75356 428 aa16.9■□□□□ 0.3
LIMD2-209ENST00000580222 DEAF1O75398 565 aaPredicted RBP16.9■□□□□ 0.3
LIMD2-209ENST00000580222 VENTXO95231 258 aa16.9■□□□□ 0.3
LIMD2-209ENST00000580222 CH25HO95992 272 aa16.9■□□□□ 0.3
LIMD2-209ENST00000580222 TGFAP01135 160 aa16.9■□□□□ 0.3
LIMD2-209ENST00000580222 BGLAPP02818 100 aa16.9■□□□□ 0.3
LIMD2-209ENST00000580222 FCGR1AP12314 374 aa16.9■□□□□ 0.3
LIMD2-209ENST00000580222 IFI30P13284 250 aa16.9■□□□□ 0.3
LIMD2-209ENST00000580222 HNF1AP20823 631 aa16.9■□□□□ 0.3
LIMD2-209ENST00000580222 EFNA4P52798 201 aa16.9■□□□□ 0.3
LIMD2-209ENST00000580222 PPP1R8Q12972 351 aaKnown RBP16.9■□□□□ 0.3
LIMD2-209ENST00000580222 MFSD13AQ14CX5 517 aa16.9■□□□□ 0.3
LIMD2-209ENST00000580222 TBPL2Q6SJ96 375 aa16.9■□□□□ 0.3
LIMD2-209ENST00000580222 FCRLAQ7L513 359 aa16.9■□□□□ 0.3
LIMD2-209ENST00000580222 RNF113BQ8IZP6 322 aaKnown RBP16.9■□□□□ 0.3
LIMD2-209ENST00000580222 OR4K5Q8NGD3 323 aa16.9■□□□□ 0.3
LIMD2-209ENST00000580222 PIGXQ8TBF5 258 aa16.9■□□□□ 0.3
LIMD2-209ENST00000580222 NAA11Q9BSU3 229 aaPredicted RBP16.9■□□□□ 0.3
LIMD2-209ENST00000580222 ASPNQ9BXN1 380 aa16.9■□□□□ 0.3
LIMD2-209ENST00000580222 DNAJB9Q9UBS3 223 aa16.9■□□□□ 0.3
LIMD2-209ENST00000580222 TRRAPQ9Y4A5 3859 aa16.89■□□□□ 0.29
LIMD2-209ENST00000580222 SH3PXD2BA1X283 911 aa16.89■□□□□ 0.29
LIMD2-209ENST00000580222 SMAD9O15198 467 aaKnown RBP16.89■□□□□ 0.29
LIMD2-209ENST00000580222 E2F6O75461 281 aa16.89■□□□□ 0.29
LIMD2-209ENST00000580222 AKR7A3O95154 331 aa16.89■□□□□ 0.29
LIMD2-209ENST00000580222 MT-ATP6P00846 226 aa16.89■□□□□ 0.29
LIMD2-209ENST00000580222 FASP25445 335 aa16.89■□□□□ 0.29
LIMD2-209ENST00000580222 GRPRP30550 384 aa16.89■□□□□ 0.29
LIMD2-209ENST00000580222 NR4A2P43354 598 aa16.89■□□□□ 0.29
LIMD2-209ENST00000580222 FABP6P51161 128 aa16.89■□□□□ 0.29
LIMD2-209ENST00000580222 SEC23BQ15437 767 aa16.89■□□□□ 0.29
LIMD2-209ENST00000580222 ZNF74Q16587 644 aa16.89■□□□□ 0.29
LIMD2-209ENST00000580222 OTUD3Q5T2D3 398 aaPredicted RBP16.89■□□□□ 0.29
LIMD2-209ENST00000580222 GTF2IRD2BQ6EKJ0 949 aa16.89■□□□□ 0.29
LIMD2-209ENST00000580222 GTF2IRD2Q86UP8 949 aa16.89■□□□□ 0.29
LIMD2-209ENST00000580222 CDK20Q8IZL9 346 aa16.89■□□□□ 0.29
LIMD2-209ENST00000580222 MOGAT1Q96PD6 335 aa16.89■□□□□ 0.29
LIMD2-209ENST00000580222 FUZQ9BT04 418 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms