RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 HPRP00739 348 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 VSIG10L2P0DP72 767 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 RPS2P15880 293 aaKnown RBP9.13□□□□□ -0.95
GGA3-206ENST00000578773 CD33P20138 364 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 DRD4P21917 467 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 SLC6A2P23975 617 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 FKBP2P26885 142 aaKnown RBP9.13□□□□□ -0.95
GGA3-206ENST00000578773 ANP32AP39687 249 aaKnown RBP9.13□□□□□ -0.95
GGA3-206ENST00000578773 MAGEA12P43365 314 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 UCP2P55851 309 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 HOXA4Q00056 320 aaPredicted RBP9.13□□□□□ -0.95
GGA3-206ENST00000578773 DR1Q01658 176 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 PMS2P3Q13401 168 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 SPDYE7PQ495Y7 208 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 FAM201AQ5SY85 155 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 TEX35Q5T0J7 233 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 THEM4Q5T1C6 240 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 LIPMQ5VYY2 423 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 ZFAND6Q6FIF0 208 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 LYPD2Q6UXB3 125 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 ZNF627Q7L945 461 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 RNF144BQ7Z419 303 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 C20orf196Q8IYI0 205 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 ZNF101Q8IZC7 436 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 OR56A1Q8NGH5 318 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 OR1J1Q8NGS3 322 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 FAM76AQ8TAV0 307 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 SLC25A36Q96CQ1 311 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 MAP6Q96JE9 813 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 SH3GL3Q99963 347 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 GSTO2Q9H4Y5 243 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 CDH20Q9HBT6 801 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 EXOSC3Q9NQT5 275 aaKnown RBP9.13□□□□□ -0.95
GGA3-206ENST00000578773 VPREB3Q9UKI3 123 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 SLC35A3Q9Y2D2 325 aa9.13□□□□□ -0.95
GGA3-206ENST00000578773 IGHV1-69DA0A0B4J2H0 117 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 MFN2O95140 757 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 IGHV1-69P01742 117 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 OPN1SWP03999 348 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 ENO1P06733 434 aaKnown RBP9.12□□□□□ -0.95
GGA3-206ENST00000578773 GKN3PP0CG01 181 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 ZNF43P17038 809 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 WNT5AP41221 380 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 ETV4P43268 484 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 HTR3AP46098 478 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 ETF1P62495 437 aaKnown RBP9.12□□□□□ -0.95
GGA3-206ENST00000578773 KCNJ10P78508 379 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 TNFAIP6P98066 277 aaPredicted RBP9.12□□□□□ -0.95
GGA3-206ENST00000578773 C2orf54Q08AI8 447 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 EPS8Q12929 822 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 CAMK2DQ13557 499 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 RUNDC3AQ59EK9 446 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 COX20Q5RI15 118 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 C1orf140Q5VVS0 124 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 AP1ARQ63HQ0 302 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 TRIM46Q7Z4K8 759 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 CCDC91Q7Z6B0 441 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 SPC24Q8NBT2 197 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 PIK3C3Q8NEB9 887 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 GATAD2BQ8WXI9 593 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 LHX4Q969G2 390 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 TXNDC15Q96J42 360 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 FCRL1Q96LA6 429 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 FOXB1Q99853 325 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 TAPBPLQ9BX59 468 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 EGLN1Q9GZT9 426 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 DPH5Q9H2P9 285 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 MRPL46Q9H2W6 279 aaKnown RBP9.12□□□□□ -0.95
GGA3-206ENST00000578773 NANOGQ9H9S0 305 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 MID1IP1Q9NPA3 183 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 TCF7L2Q9NQB0 619 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 GIMAP2Q9UG22 337 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 POFUT2Q9Y2G5 429 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 USH1CQ9Y6N9 552 aa9.12□□□□□ -0.95
GGA3-206ENST00000578773 NPIPB7O75200 414 aa9.11□□□□□ -0.95
GGA3-206ENST00000578773 UBL3O95164 117 aa9.11□□□□□ -0.95
GGA3-206ENST00000578773 VAMP5O95183 116 aa9.11□□□□□ -0.95
GGA3-206ENST00000578773 CD55P08174 381 aa9.11□□□□□ -0.95
GGA3-206ENST00000578773 ADH4P08319 380 aa9.11□□□□□ -0.95
GGA3-206ENST00000578773 MATN1P21941 496 aa9.11□□□□□ -0.95
GGA3-206ENST00000578773 CBLP22681 906 aa9.11□□□□□ -0.95
GGA3-206ENST00000578773 LSP1P33241 339 aa9.11□□□□□ -0.95
GGA3-206ENST00000578773 SOAT1P35610 550 aa9.11□□□□□ -0.95
GGA3-206ENST00000578773 MDH2P40926 338 aaKnown RBP9.11□□□□□ -0.95
GGA3-206ENST00000578773 RPS5P46782 204 aaKnown RBP9.11□□□□□ -0.95
GGA3-206ENST00000578773 DLX1P56177 255 aa9.11□□□□□ -0.95
GGA3-206ENST00000578773 SMU1Q2TAY7 513 aa9.11□□□□□ -0.95
GGA3-206ENST00000578773 FAM153CQ494X1 144 aa9.11□□□□□ -0.95
GGA3-206ENST00000578773 TTMPQ5BVD1 217 aa9.11□□□□□ -0.95
GGA3-206ENST00000578773 ATG16L1Q676U5 607 aa9.11□□□□□ -0.95
GGA3-206ENST00000578773 PSMA8Q8TAA3 256 aa9.11□□□□□ -0.95
GGA3-206ENST00000578773 ZNF420Q8TAQ5 688 aaPredicted RBP9.11□□□□□ -0.95
GGA3-206ENST00000578773 SLC25A40Q8TBP6 338 aa9.11□□□□□ -0.95
GGA3-206ENST00000578773 ITLN1Q8WWA0 313 aa9.11□□□□□ -0.95
GGA3-206ENST00000578773 CITED2Q99967 270 aaPredicted RBP9.11□□□□□ -0.95
GGA3-206ENST00000578773 MRPL57Q9BQC6 102 aaKnown RBP9.11□□□□□ -0.95
GGA3-206ENST00000578773 TMEM246Q9BRR3 403 aa9.11□□□□□ -0.95
GGA3-206ENST00000578773 IQCGQ9H095 443 aaKnown RBP9.11□□□□□ -0.95
GGA3-206ENST00000578773 OR51I1Q9H343 314 aa9.11□□□□□ -0.95
GGA3-206ENST00000578773 ZNRD1Q9P1U0 126 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms