RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 ARR3P36575 388 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 MPV17P39210 176 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 ERFP50548 548 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 ATP4BP51164 291 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 ARFIP2P53365 341 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 UGT2B15P54855 530 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 SH3BGRP55822 239 aaPredicted RBP3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 BIDP55957 195 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 SNRPD2P62316 118 aaKnown RBP3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 HPCAP84074 193 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 CHRNB3Q05901 458 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 FMODQ06828 376 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 PUDPQ08623 228 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 LRRC74AQ0VAA2 488 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 ZP4Q12836 540 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 NPRL3Q12980 569 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 DAG1Q14118 895 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 LARS2Q15031 903 aaKnown RBP3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 IQCCQ4KMZ1 466 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 AGKQ53H12 422 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 RABL3Q5HYI8 236 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 ENTPD8Q5MY95 495 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 OTPQ5XKR4 325 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 FAM166AQ6J272 317 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 ULK3Q6PHR2 472 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 ZNF813Q6ZN06 617 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 CCDC80Q76M96 950 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 PXKQ7Z7A4 578 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 DEPDC4Q8N2C3 294 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 SCAIQ8N9R8 606 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 OR4F15Q8NGB8 312 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 OR6X1Q8NH79 312 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 MOSPD2Q8NHP6 518 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 PFN4Q8NHR9 129 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 ADAMTS16Q8TE57 1224 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 UBASH3BQ8TF42 649 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 TMEM158Q8WZ71 300 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 HDAC2Q92769 488 aaKnown RBP3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 DACT3Q96B18 629 aaPredicted RBP3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 ZNF583Q96ND8 569 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 ANKRD27Q96NW4 1050 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 ZNF347Q96SE7 839 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 CGREF1Q99674 301 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 MCHR1Q99705 422 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 FOXB1Q99853 325 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 PIMREGQ9BSJ6 248 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 CCDC28BQ9BUN5 200 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 TAPBPLQ9BX59 468 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 TMPRSS13Q9BYE2 586 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 SHARPINQ9H0F6 387 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 ZNF275Q9NSD4 429 aaPredicted RBP3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 TREM2Q9NZC2 230 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 GLTPQ9NZD2 209 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 CALML5Q9NZT1 146 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 TESQ9UGI8 421 aaKnown RBP3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 KLHL21Q9UJP4 597 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 IFT52Q9Y366 437 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 SPEF1Q9Y4P9 236 aa3.79□□□□□ -1.8
PPP4R1-209ENST00000578329 ZSCAN5BA6NJL1 495 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 CPSF4LA6NMK7 179 aaKnown RBP3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 C11orf98E9PRG8 122 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 SLCO1B7G3V0H7 640 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 DHHO43323 396 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 KCNAB3O43448 404 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 CHP2O43745 196 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 SYNGR3O43761 229 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 OR2T1O43869 369 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 ICMTO60725 284 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 FMO6PO60774 539 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 FCN3O75636 299 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 TRMUO75648 421 aaKnown RBP3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 RGS9O75916 674 aaPredicted RBP3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 UBOX5O94941 541 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 TGDSO95455 350 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 SLC2A10O95528 541 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 NGFP01138 241 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 SERPINA5P05154 406 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 F13BP05160 661 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 FAM157BP0CG42 384 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 GAAP10253 952 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 CD79AP11912 226 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 MAKP20794 623 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 ZFP36P26651 326 aaKnown RBP3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 APEX1P27695 318 aaKnown RBP3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 CFPP27918 469 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 CDAP32320 146 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 AQP2P41181 271 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 PTDSS1P48651 473 aaKnown RBP3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 EVX1P49640 407 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 MMP15P51511 669 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 DVL1P1P54792 670 aaPredicted RBP3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 RGS8P57771 180 aaPredicted RBP3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 FXYD6P3P58550 94 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 UBE2NP61088 152 aaKnown RBP3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 SEC61A1P61619 476 aaKnown RBP3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 COPZ1P61923 177 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 RAB1AP62820 205 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 HOXA4Q00056 320 aaPredicted RBP3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 MYBPC1Q00872 1141 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 PAX2Q02962 417 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms