RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 SNAP29O95721 258 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 MT-ND5P03915 603 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 HNRNPCP07910 306 aaKnown RBP eCLIP9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 PPIAL4FP0DN26 164 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 ARAFP10398 606 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 PRG2P13727 222 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 CREB1P16220 341 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 TUBA1BP68363 451 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 TUBA4AP68366 448 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 CAMK2DQ13557 499 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 MS4A18Q3C1V0 323 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 KRT71Q3SY84 523 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 GKAP1Q5VSY0 366 aaPredicted RBP9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 ACSM5Q6NUN0 579 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 TMEM53Q6P2H8 277 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 ZNF813Q6ZN06 617 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 TUBA1AQ71U36 451 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 HMGN2P46Q86SG4 172 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 SNX33Q8WV41 574 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 TAAR8Q969N4 342 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 FOXB1Q99853 325 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 CENPOQ9BU64 300 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 ULBP2Q9BZM5 246 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 LRMDAQ9H2I8 198 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 METTL17Q9H7H0 456 aaPredicted RBP9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 G6PC2Q9NQR9 355 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 STX18Q9P2W9 335 aaKnown RBP9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 A0A1B0GWA3 101 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 SERPINA5P05154 406 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 HOXB9P17482 250 aaPredicted RBP9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 BGNP21810 368 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 NCALDP61601 193 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 PUDPQ08623 228 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 BST1Q10588 318 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 NPRL3Q12980 569 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 ALG10BQ5I7T1 473 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 LRIF1Q5T3J3 769 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 UNQ6126/PRO20091Q6UXV3 157 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 OR6X1Q8NH79 312 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 PPP1R36Q96LQ0 422 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 OSBPL10Q9BXB5 764 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 BCL2L14Q9BZR8 327 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 TMEM38AQ9H6F2 299 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 PNPOQ9NVS9 261 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 HIF1ANQ9NWT6 349 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 ANK2Q01484 3957 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 IGKV1D-42A0A075B6H8 117 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 A0A0B4J203 849 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 A0A0B4J2E0 115 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 A0A1B0GX12 115 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 GMNCA6NCL1 334 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 FARS2O95363 451 aaKnown RBP9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 ZNF250P15622 560 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 CAPZA2P47755 286 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 CSNK1A1P48729 337 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 POLR2JP52435 117 aaKnown RBP9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 VSNL1P62760 191 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 ACTG1P63261 375 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 SLC3A1Q07837 685 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 GCNT6Q5T4J0 391 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 KRT80Q6KB66 452 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 RGS7BPQ6MZT1 257 aaPredicted RBP9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 ZNF613Q6PF04 617 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 FIP1L1Q6UN15 594 aaKnown RBP9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 MYPOPQ86VE0 399 aaPredicted RBP9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 RANBP3LQ86VV4 465 aaPredicted RBP9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 SLC30A8Q8IWU4 369 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 MIER2Q8N344 545 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 LILRB2Q8N423 598 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 ZNF519Q8TB69 540 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 FAM81AQ8TBF8 368 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 SUN5Q8TC36 379 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 LRRC37BQ96QE4 947 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 ZNF607Q96SK3 696 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 SLC19A3Q9BZV2 496 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 NTN4Q9HB63 628 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 SLCO1B3Q9NPD5 702 aa9.64□□□□□ -0.87
SMARCE1-214ENST00000578112 WDR91A4D1P6 747 aa9.63□□□□□ -0.87
SMARCE1-214ENST00000578112 CLIC1O00299 241 aa9.63□□□□□ -0.87
SMARCE1-214ENST00000578112 IGF2P01344 180 aa9.63□□□□□ -0.87
SMARCE1-214ENST00000578112 CD79AP11912 226 aa9.63□□□□□ -0.87
SMARCE1-214ENST00000578112 ADRA2CP18825 462 aa9.63□□□□□ -0.87
SMARCE1-214ENST00000578112 LIPAP38571 399 aa9.63□□□□□ -0.87
SMARCE1-214ENST00000578112 LMO4P61968 165 aa9.63□□□□□ -0.87
SMARCE1-214ENST00000578112 PMS2P3Q13401 168 aa9.63□□□□□ -0.87
SMARCE1-214ENST00000578112 TRIP10Q15642 601 aa9.63□□□□□ -0.87
SMARCE1-214ENST00000578112 REEP3Q6NUK4 255 aa9.63□□□□□ -0.87
SMARCE1-214ENST00000578112 CPEB3Q8NE35 698 aaKnown RBP9.63□□□□□ -0.87
SMARCE1-214ENST00000578112 OR6N1Q8NGY5 312 aa9.63□□□□□ -0.87
SMARCE1-214ENST00000578112 OR5J2Q8NH18 312 aa9.63□□□□□ -0.87
SMARCE1-214ENST00000578112 PAIP1Q9H074 479 aaKnown RBP9.63□□□□□ -0.87
SMARCE1-214ENST00000578112 ZNF696Q9H7X3 374 aa9.63□□□□□ -0.87
SMARCE1-214ENST00000578112 ZNF275Q9NSD4 429 aaPredicted RBP9.63□□□□□ -0.87
SMARCE1-214ENST00000578112 A0A0G2JMP0 313 aa9.63□□□□□ -0.87
SMARCE1-214ENST00000578112 A0A0X1KG70 313 aa9.63□□□□□ -0.87
SMARCE1-214ENST00000578112 ZNF503-AS2A6NEH8 195 aa9.63□□□□□ -0.87
SMARCE1-214ENST00000578112 C17orf100A8MU93 164 aa9.63□□□□□ -0.87
SMARCE1-214ENST00000578112 M0R3G1 203 aa9.63□□□□□ -0.87
SMARCE1-214ENST00000578112 PLPP3O14495 311 aa9.63□□□□□ -0.87
SMARCE1-214ENST00000578112 SERPINB7O75635 380 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms