RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 KLF17Q5JT82 389 aaPredicted RBP1.75□□□□□ -2.13
COPS3-213ENST00000577210 CASC10Q5T4H9 136 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 PLCXD3Q63HM9 321 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 REEP3Q6NUK4 255 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 ZNF544Q6NX49 715 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 C1orf94Q6P1W5 598 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 TMIGD1Q6UXZ0 262 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 H2AFVQ71UI9 128 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 SSX9Q7RTT3 188 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 SLC16A14Q7RTX9 510 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 THOC6Q86W42 341 aaKnown RBP1.75□□□□□ -2.13
COPS3-213ENST00000577210 PLA2G4DQ86XP0 818 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 MMAAQ8IVH4 418 aaKnown RBP1.75□□□□□ -2.13
COPS3-213ENST00000577210 CMTM1Q8IZ96 169 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 PUSL1Q8N0Z8 303 aaKnown RBP1.75□□□□□ -2.13
COPS3-213ENST00000577210 GABRG1Q8N1C3 465 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 C6orf223Q8N319 242 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 LIX1Q8N485 282 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 PDCL2Q8N4E4 241 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 HSD17B11Q8NBQ5 300 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 OR4C5Q8NGB2 326 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 OR10G3Q8NGC4 313 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 OR52K1Q8NGK4 314 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 OR4A4PQ8NGN8 299 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 OR1S2Q8NGQ3 325 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 OR5B3Q8NH48 314 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 OR6X1Q8NH79 312 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 NEIL3Q8TAT5 605 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 SLC7A13Q8TCU3 470 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 CA5BP1Q8WTZ4 195 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 TSEN15Q8WW01 171 aaKnown RBP1.75□□□□□ -2.13
COPS3-213ENST00000577210 NRGNQ92686 78 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 ECHDC3Q96DC8 303 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 OR8B4Q96RC9 309 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 KCNA7Q96RP8 456 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 SORT1Q99523 831 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 SDHCQ99643 169 aaPredicted RBP1.75□□□□□ -2.13
COPS3-213ENST00000577210 TSG101Q99816 390 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 RIOK1Q9BRS2 568 aaKnown RBP1.75□□□□□ -2.13
COPS3-213ENST00000577210 PELOQ9BRX2 385 aaKnown RBP1.75□□□□□ -2.13
COPS3-213ENST00000577210 FAIM2Q9BWQ8 316 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 ANKRD60Q9BZ19 345 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 ROGDIQ9GZN7 287 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 MFFQ9GZY8 342 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 GBA3Q9H227 469 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 BLZF1Q9H2G9 400 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 OR51J1Q9H342 316 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 FANCEQ9HB96 536 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 AIG1Q9NVV5 245 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 GIN1Q9NXP7 522 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 KCNIP1Q9NZI2 227 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 UGT2A1Q9Y4X1 527 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 KIF27Q86VH2 1401 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 CNTNAP1P78357 1384 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 TP53BP1Q12888 1972 aaPredicted RBP1.74□□□□□ -2.13
COPS3-213ENST00000577210 IGHV1OR21-1A0A087WYE8 117 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 IGKV6D-21A0A0A0MT36 114 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 LOC100653049A0A140TA62 436 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 NKX2-6A6NCS4 301 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 A8MUA0 341 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 LOC110117498-PIK3R3F6TDL0 507 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 CCL21O00585 134 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 DYNC1I1O14576 645 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 AGPAT2O15120 278 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 HUS1O60921 280 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 ZNF780AO75290 641 aaPredicted RBP1.74□□□□□ -2.13
COPS3-213ENST00000577210 CA11O75493 328 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 FLOT1O75955 427 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 KRT34O76011 436 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 CCNB2O95067 398 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 KLF8O95600 359 aaPredicted RBP1.74□□□□□ -2.13
COPS3-213ENST00000577210 IGHV2-5P01817 119 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 MBP02144 154 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 IGHV4-34P06331 123 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 TPM1P09493 284 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 CCNB1P14635 433 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 ZNF250P15622 560 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 ZNF43P17038 809 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 TBPP20226 339 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 FUT3P21217 361 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 DCKP27707 260 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 RRM2P31350 389 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 NSG1P42857 185 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 VDAC2P45880 294 aaPredicted RBP1.74□□□□□ -2.13
COPS3-213ENST00000577210 CX3CR1P49238 355 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 KLK7P49862 253 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 RAB9AP51151 201 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 CCNHP51946 323 aaPredicted RBP1.74□□□□□ -2.13
COPS3-213ENST00000577210 APOC4P55056 127 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 TAS2R19P59542 299 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 YWHAGP61981 247 aaKnown RBP eCLIP1.74□□□□□ -2.13
COPS3-213ENST00000577210 ACTA2P62736 377 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 ERVK-25P63136 954 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 ACTG2P63267 376 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 ACTC1P68032 377 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 ACTA1P68133 377 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 PSG7Q13046 419 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 AGBL2Q5U5Z8 902 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 C9orf135Q5VTT2 229 aa1.74□□□□□ -2.13
COPS3-213ENST00000577210 C22orf42Q6IC83 251 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms