RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 RUNX2Q13950 521 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 ZNF628Q5EBL2 1059 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 CORO6Q6QEF8 472 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 MCEMP1Q8IX19 187 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 MED18Q9BUE0 208 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 VN1R3Q9BXE9 311 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 POFUT1Q9H488 388 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 ARRDC5A6NEK1 342 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 MED6O75586 246 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 BDKRB2P30411 391 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 SFTPA1Q8IWL2 248 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 LINC01555Q8NAE3 123 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 SMIM19Q96E16 107 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 EMC6Q9BV81 110 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 OR10A5Q9H207 317 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 ANKRD19PQ9H560 264 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 ZNF346Q9UL40 294 aaKnown RBP16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 HRH3Q9Y5N1 445 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 PYCARD-AS1I3L0S3 204 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 SERPINA5P05154 406 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 NPY4RP50391 375 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 SFRP5Q5T4F7 317 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 NHLRC1Q6VVB1 395 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 CMIPQ8IY22 773 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 OR5B2Q96R09 309 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 DEFB126Q9BYW3 111 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 PTGES2Q9H7Z7 377 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 ZNF318Q5VUA4 2279 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 COL24A1Q17RW2 1714 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 PMP2P02689 132 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 MSL3P1P0C860 447 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 SERPINA2P20848 420 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 RBM39Q14498 530 aaKnown RBP16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 GNMTQ14749 295 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 FXNQ16595 210 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 MAMSTRQ6ZN01 415 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 TMED6Q8WW62 240 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 FGGYQ96C11 551 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 MIA3Q5JRA6 1907 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 PHYHO14832 338 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 GMDSO60547 372 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 SNAPC5O75971 98 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 IFNGR1P15260 489 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 ZNF43P17038 809 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 BTG2P78543 158 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 GPNMBQ14956 572 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 SLC36A2Q495M3 483 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 RAET1LQ5VY80 246 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 BEND4Q6ZU67 534 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 SVBPQ8N300 66 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 SCARB1Q8WTV0 552 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 MAP3K3Q99759 626 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 SIRT3Q9NTG7 399 aaPredicted RBP16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 GLS2Q9UI32 602 aa16.4■□□□□ 0.22
ATPAF1-214ENST00000576409 CFIP05156 583 aa16.39■□□□□ 0.21
ATPAF1-214ENST00000576409 ELOCQ15369 112 aa16.39■□□□□ 0.21
ATPAF1-214ENST00000576409 ZNF77Q15935 545 aa16.39■□□□□ 0.21
ATPAF1-214ENST00000576409 GKN2Q86XP6 184 aa16.39■□□□□ 0.21
ATPAF1-214ENST00000576409 ZDHHC12Q96GR4 267 aa16.39■□□□□ 0.21
ATPAF1-214ENST00000576409 SENP5Q96HI0 755 aaPredicted RBP16.39■□□□□ 0.21
ATPAF1-214ENST00000576409 LMF2Q9BU23 707 aaKnown RBP16.39■□□□□ 0.21
ATPAF1-214ENST00000576409 MRI1Q9BV20 369 aa16.39■□□□□ 0.21
ATPAF1-214ENST00000576409 EHFQ9NZC4 300 aa16.39■□□□□ 0.21
ATPAF1-214ENST00000576409 C19orf53Q9UNZ5 99 aaPredicted RBP16.39■□□□□ 0.21
ATPAF1-214ENST00000576409 MED12Q93074 2177 aa16.39■□□□□ 0.21
ATPAF1-214ENST00000576409 NUDT21O43809 227 aaKnown RBP16.39■□□□□ 0.21
ATPAF1-214ENST00000576409 ACSM4P0C7M7 580 aa16.39■□□□□ 0.21
ATPAF1-214ENST00000576409 FOSL2P15408 326 aa16.39■□□□□ 0.21
ATPAF1-214ENST00000576409 FAM209AQ5JX71 171 aa16.39■□□□□ 0.21
ATPAF1-214ENST00000576409 C20orf24Q9BUV8 137 aa16.39■□□□□ 0.21
ATPAF1-214ENST00000576409 PLEKHJ1Q9NW61 149 aa16.39■□□□□ 0.21
ATPAF1-214ENST00000576409 GLCEO94923 617 aa16.39■□□□□ 0.21
ATPAF1-214ENST00000576409 HPXP02790 462 aa16.39■□□□□ 0.21
ATPAF1-214ENST00000576409 OMGP23515 440 aa16.39■□□□□ 0.21
ATPAF1-214ENST00000576409 KIRREL2Q6UWL6 708 aa16.39■□□□□ 0.21
ATPAF1-214ENST00000576409 DPY19L2P2Q6ZN68 376 aa16.39■□□□□ 0.21
ATPAF1-214ENST00000576409 RSC1A1Q92681 617 aa16.39■□□□□ 0.21
ATPAF1-214ENST00000576409 BANF2Q9H503 90 aa16.39■□□□□ 0.21
ATPAF1-214ENST00000576409 UBE2J1Q9Y385 318 aaPredicted RBP16.39■□□□□ 0.21
ATPAF1-214ENST00000576409 COL5A3P25940 1745 aaPredicted RBP16.39■□□□□ 0.21
ATPAF1-214ENST00000576409 RAB3AP20336 220 aa16.38■□□□□ 0.21
ATPAF1-214ENST00000576409 CRABP1P29762 137 aa16.38■□□□□ 0.21
ATPAF1-214ENST00000576409 H3F3CQ6NXT2 135 aa16.38■□□□□ 0.21
ATPAF1-214ENST00000576409 PRSS41Q7RTY9 318 aa16.38■□□□□ 0.21
ATPAF1-214ENST00000576409 OR51Q1Q8NH59 317 aa16.38■□□□□ 0.21
ATPAF1-214ENST00000576409 PELI1Q96FA3 418 aa16.38■□□□□ 0.21
ATPAF1-214ENST00000576409 CCDC86Q9H6F5 360 aaKnown RBP16.38■□□□□ 0.21
ATPAF1-214ENST00000576409 WDR76Q9H967 626 aa16.38■□□□□ 0.21
ATPAF1-214ENST00000576409 ERVMER34-1Q9H9K5 563 aa16.38■□□□□ 0.21
ATPAF1-214ENST00000576409 ENTPD2Q9Y5L3 495 aa16.38■□□□□ 0.21
ATPAF1-214ENST00000576409 TMEM212A6NML5 194 aa16.38■□□□□ 0.21
ATPAF1-214ENST00000576409 TPOP07202 933 aa16.38■□□□□ 0.21
ATPAF1-214ENST00000576409 CYCSP99999 105 aaKnown RBP16.38■□□□□ 0.21
ATPAF1-214ENST00000576409 CAMK2DQ13557 499 aa16.38■□□□□ 0.21
ATPAF1-214ENST00000576409 GLYR1Q49A26 553 aaPredicted RBP16.38■□□□□ 0.21
ATPAF1-214ENST00000576409 GPR157Q5UAW9 335 aa16.38■□□□□ 0.21
ATPAF1-214ENST00000576409 OR4K15Q8NH41 348 aa16.38■□□□□ 0.21
ATPAF1-214ENST00000576409 HOXB13Q92826 284 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms