RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 TLE3Q04726 772 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 C1orf61Q13536 156 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 RSU1Q15404 277 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 ADGRE4PQ86SQ3 457 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 NAXDQ8IW45 347 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 STARD5Q9NSY2 213 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 CLDND1Q9NY35 253 aa12.07□□□□□ -0.48
PCDHGB3-201ENST00000576222 SERTM1A2A2V5 107 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 H3BNC9 293 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 PEX12O00623 359 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 MAN2B1O00754 1011 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 AQP8O94778 261 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 IRS1P35568 1242 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 CSRP3P50461 194 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 NDUFA6P56556 154 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 SLC22A25Q6T423 547 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 ABHD12BQ7Z5M8 362 aaPredicted RBP12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 RTN4RL1Q86UN2 441 aaPredicted RBP12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 APOOQ9BUR5 198 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 PTGES2Q9H7Z7 377 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 ELF5Q9UKW6 265 aaPredicted RBP12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 SLC7A11Q9UPY5 501 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 CSAG2Q9Y5P2 127 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 HNRNPA1P09651 372 aaKnown RBP eCLIP12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 ACSM1Q08AH1 577 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 SERTAD2Q14140 314 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 LGALSLQ3ZCW2 172 aaPredicted RBP12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 BAP18Q8IXM2 172 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 PRR22Q8IZ63 422 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 FRMD1Q8N878 549 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 ARRDC3Q96B67 414 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 EID2BQ96D98 161 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 MS4A6EQ96DS6 147 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 SCPEP1Q9HB40 452 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 UBQLN4Q9NRR5 601 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 ENTPD2Q9Y5L3 495 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 MCRIP1C9JLW8 97 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 CLUP10909 449 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 PVRP15151 417 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 GPNMBQ14956 572 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 RNLSQ5VYX0 342 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 CD300LDQ6UXZ3 194 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 STAC2Q6ZMT1 411 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 NAA40Q86UY6 237 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 KDM8Q8N371 416 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 OR11H7Q8NGC8 314 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 OR13C9Q8NGT0 318 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 ZFPM2Q8WW38 1151 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 RNF170Q96K19 258 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 ADOQ96SZ5 270 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 REV1Q9UBZ9 1251 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 FBXL4Q9UKA2 621 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 ADAM18Q9Y3Q7 739 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 AHDC1Q5TGY3 1603 aaPredicted RBP12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 SLC33A1O00400 549 aaPredicted RBP12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 NAGAP17050 411 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 PSMB6P28072 239 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 TSFMP43897 325 aaKnown RBP12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 ARRB1P49407 418 aaPredicted RBP12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 KIAA0141Q14154 515 aaPredicted RBP12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 MRPL58Q14197 206 aaKnown RBP12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 CHRDL2Q6WN34 429 aa12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 ZNF761Q86XN6 746 aaPredicted RBP12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 THAP3Q8WTV1 239 aaPredicted RBP12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 TSPAN10Q9H1Z9 355 aaPredicted RBP12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 CGGBP1Q9UFW8 167 aaPredicted RBP12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.06□□□□□ -0.48
PCDHGB3-201ENST00000576222 SERINC4A6NH21 518 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 YY2O15391 372 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 ATG12O94817 140 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 NDUFB6O95139 128 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 MEX3BQ6ZN04 569 aaKnown RBP12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 TMEM151BQ8IW70 566 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 SLC30A7Q8NEW0 376 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 RAB3CQ96E17 227 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 LURAP1Q96LR2 239 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 C1QTNF6Q9BXI9 259 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 SPHK1Q9NYA1 384 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 RFPL4AA6NLU0 287 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 RFPL4AL1F8VTS6 287 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 TO15178 435 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 PLPP2O43688 288 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 TAS2R46P59540 309 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 IAH1Q2TAA2 248 aaPredicted RBP12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 ARHGAP11BQ3KRB8 267 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 TRMT12Q53H54 448 aaKnown RBP12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 MCEMP1Q8IX19 187 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 SPICQ8N5J4 248 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 C12orf76Q8N812 135 aaPredicted RBP12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 OR5T1Q8NG75 326 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 GLYATL2Q8WU03 294 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 RNF32Q9H0A6 362 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 PDE7BQ9NP56 450 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 POLMQ9NP87 494 aaPredicted RBP12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 DUSP22Q9NRW4 184 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 TM7SF3Q9NS93 570 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 C17orf105B2RV13 164 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 K7ESM1 405 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 DOK2O60496 412 aa12.05□□□□□ -0.48
PCDHGB3-201ENST00000576222 APBB3O95704 486 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms