RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 LRRN1Q6UXK5 716 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 ZNF620Q6ZNG0 422 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 JAZF1Q86VZ6 243 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 EPHX4Q8IUS5 362 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 PSMA8Q8TAA3 256 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 SSMEM1Q8WWF3 244 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 C11orf40Q8WZ69 217 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 DYRK2Q92630 601 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 L3HYPDHQ96EM0 354 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 SLC35G5Q96KT7 338 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 MAGEB18Q96M61 343 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 WWC2-AS2Q96NR7 200 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 SIKE1Q9BRV8 207 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 GATA5Q9BWX5 397 aaPredicted RBP4.98□□□□□ -1.61
SMG6-219ENST00000575663 CHIAQ9BZP6 476 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 EGLN1Q9GZT9 426 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 NSRP1Q9H0G5 558 aaKnown RBP4.98□□□□□ -1.61
SMG6-219ENST00000575663 C1orf198Q9H425 327 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 MARCH7Q9H992 704 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 KCNK9Q9NPC2 374 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 B3GAT2Q9NPZ5 323 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 B3GNT2Q9NY97 397 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 KIF17Q9P2E2 1029 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 KCNE5Q9UJ90 142 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 GPR45Q9Y5Y3 372 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 NPTNQ9Y639 398 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 CACNG2Q9Y698 323 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 POMT1Q9Y6A1 747 aa4.98□□□□□ -1.61
SMG6-219ENST00000575663 RYR2Q92736 4967 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 A0A096LPI6 279 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 RNF103-CHMP3A0A140T963 221 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 LOC100653049A0A140TA62 436 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 PLSCR5A0PG75 271 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 PRAMEF27A3QJZ7 478 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 CFAP73A6NFT4 308 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 SMIM23A6NLE4 172 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 A8MVM7 634 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 TRAPPC2LH3BP13 241 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 M0R3G1 203 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 FAAHO00519 579 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 AP3D1O14617 1153 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 BCAS1O75363 584 aaPredicted RBP4.97□□□□□ -1.61
SMG6-219ENST00000575663 KRT34O76011 436 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 AHSA1O95433 338 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 BPNT1O95861 308 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 C6orf47O95873 294 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 CLPTM1O96005 669 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 CHEK2O96017 543 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 LCKP06239 509 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 GUSBP08236 651 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 RPSAP08865 295 aaKnown RBP4.97□□□□□ -1.61
SMG6-219ENST00000575663 FAM157BP0CG42 384 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 OR8G3PP0DMU2 310 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 UROSP10746 265 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 B4GALT1P15291 398 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 ZNF250P15622 560 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 MAKP20794 623 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 MATN1P21941 496 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 MAPK1P28482 360 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 ALDH3A1P30838 453 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 GNALP38405 381 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 ETV4P43268 484 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 GIPRP48546 466 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 ZNF81P51508 661 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 P2RY4P51582 365 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 PROK1P58294 105 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 BPIFB3P59826 476 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 COPZ1P61923 177 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 RAB1AP62820 205 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 RPS26P62854 115 aaKnown RBP4.97□□□□□ -1.61
SMG6-219ENST00000575663 KCNJ10P78508 379 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 GLO1Q04760 184 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 PIGFQ07326 219 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 C1DQ13901 141 aaKnown RBP4.97□□□□□ -1.61
SMG6-219ENST00000575663 DOC2BQ14184 412 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 MAPK14Q16539 360 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 GSTA3Q16772 222 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 DEFB112Q30KQ8 113 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 TMEM155Q4W5P6 130 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 ZMAT1Q5H9K5 638 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 GPR157Q5UAW9 335 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 LIPMQ5VYY2 423 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 ATG16L1Q676U5 607 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 CCBE1Q6UXH8 406 aaPredicted RBP4.97□□□□□ -1.61
SMG6-219ENST00000575663 ZNF813Q6ZN06 617 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 CCNYL1Q8N7R7 359 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 ICA1LQ8NDH6 482 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 OR10S1Q8NGN2 331 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 LINC01006Q8NI28 216 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 ZNF519Q8TB69 540 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 TBC1D15Q8TC07 691 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 DYDC1Q8WWB3 177 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 STON2Q8WXE9 905 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 SGCDQ92629 289 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 UPRTQ96BW1 309 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 FAM71F1Q96KD3 344 aaPredicted RBP4.97□□□□□ -1.61
SMG6-219ENST00000575663 FCRL1Q96LA6 429 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 TSPAN32Q96QS1 320 aa4.97□□□□□ -1.61
SMG6-219ENST00000575663 PRPF18Q99633 342 aaKnown RBP4.97□□□□□ -1.61
SMG6-219ENST00000575663 BCL2L14Q9BZR8 327 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms