RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 ZNF566Q969W8 418 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 ZC3HAV1LQ96H79 300 aaKnown RBP9.7□□□□□ -0.86
CHD3-216ENST00000573936 FAM46AQ96IP4 442 aaKnown RBP9.7□□□□□ -0.86
CHD3-216ENST00000573936 TXNIPQ9H3M7 391 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 GPR35Q9HC97 309 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 CCM2LQ9NUG4 571 aaPredicted RBP9.7□□□□□ -0.86
CHD3-216ENST00000573936 AMDHD2Q9Y303 409 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 TRAV27A0A087WT01 109 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 FAM221AA4D161 298 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 OR5H1A6NKK0 313 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 M0R3G1 203 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 CDC42EP2O14613 210 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 PTP4A3O75365 173 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 RAD51DO75771 328 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 NDUFB2O95178 105 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 WNT11O96014 354 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 IGHMP01871 453 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 FLNAP21333 2647 aaKnown RBP9.69□□□□□ -0.86
CHD3-216ENST00000573936 FPR3P25089 353 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 RPL4P36578 427 aaKnown RBP9.69□□□□□ -0.86
CHD3-216ENST00000573936 NR1H2P55055 460 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 CLRN1P58418 232 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 RPL27P61353 136 aaKnown RBP9.69□□□□□ -0.86
CHD3-216ENST00000573936 TSPAN31Q12999 210 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 MELKQ14680 651 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 PPA1Q15181 289 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 ACKR1Q16570 336 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 BEX5Q5H9J7 111 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 C9orf135Q5VTT2 229 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 C1orf94Q6P1W5 598 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 ANKRD16Q6P6B7 361 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 KLHL24Q6TFL4 600 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 ZER1Q7Z7L7 766 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 WFDC8Q8IUA0 241 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 CCDC36Q8IYA8 594 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 C10orf67Q8IYJ2 551 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 OR4C15Q8NGM1 316 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 OR1K1Q8NGR3 316 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 OR13C2Q8NGS9 318 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 FNDC8Q8TC99 324 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 MAGEE2Q8TD90 523 aaPredicted RBP9.69□□□□□ -0.86
CHD3-216ENST00000573936 ASB10Q8WXI3 467 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 TMEM54Q969K7 222 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 SLCO4A1Q96BD0 722 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 ALKBH3Q96Q83 286 aaPredicted RBP9.69□□□□□ -0.86
CHD3-216ENST00000573936 ULBP2Q9BZM5 246 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 CRLF2Q9HC73 371 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 MOV10Q9HCE1 1003 aaKnown RBP9.69□□□□□ -0.86
CHD3-216ENST00000573936 OBP2BQ9NPH6 170 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 SLC17A5Q9NRA2 495 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 RASSF1Q9NS23 344 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 GLTPQ9NZD2 209 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 ZNF346Q9UL40 294 aaKnown RBP9.69□□□□□ -0.86
CHD3-216ENST00000573936 SIGLEC7Q9Y286 467 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 POFUT2Q9Y2G5 429 aa9.69□□□□□ -0.86
CHD3-216ENST00000573936 RRP15Q9Y3B9 282 aaKnown RBP9.69□□□□□ -0.86
CHD3-216ENST00000573936 SAMHD1Q9Y3Z3 626 aaKnown RBP9.69□□□□□ -0.86
CHD3-216ENST00000573936 MAGED1Q9Y5V3 778 aaPredicted RBP9.69□□□□□ -0.86
CHD3-216ENST00000573936 MPDZO75970 2070 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 A6NIZ1 184 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 ZNF99A8MXY4 864 aaPredicted RBP9.68□□□□□ -0.86
CHD3-216ENST00000573936 KLF4O43474 513 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 FKBP6O75344 327 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 CTAG2O75638 210 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 TRMUO75648 421 aaKnown RBP9.68□□□□□ -0.86
CHD3-216ENST00000573936 THBDP07204 575 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 CD14P08571 375 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 PGA4P0DJD7 388 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 PGA3P0DJD8 388 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 ACADSP16219 412 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 CDH2P19022 906 aaPredicted RBP9.68□□□□□ -0.86
CHD3-216ENST00000573936 GSSP48637 474 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 ARHGDIAP52565 204 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 FOXG1P55316 489 aaPredicted RBP9.68□□□□□ -0.86
CHD3-216ENST00000573936 RAP1BP61224 184 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 RAP1AP62834 184 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 LGALS3BPQ08380 585 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 FHL1Q13642 323 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 TAB1Q15750 504 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 MICAQ29983 383 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 CEACAM16Q2WEN9 425 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 ARMC4Q5T2S8 1044 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 RPL13AP3Q6NVV1 102 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 PGBD2Q6P3X8 592 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 SMARCD3Q6STE5 483 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 DPY19L2P2Q6ZN68 376 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 LINGO2Q7L985 606 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 MEX3DQ86XN8 651 aaKnown RBP9.68□□□□□ -0.86
CHD3-216ENST00000573936 LRRC75AQ8NAA5 344 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 DUS3LQ96G46 650 aaKnown RBP9.68□□□□□ -0.86
CHD3-216ENST00000573936 GPX7Q96SL4 187 aaPredicted RBP9.68□□□□□ -0.86
CHD3-216ENST00000573936 ALG12Q9BV10 488 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 POLDIP3Q9BY77 421 aaKnown RBP9.68□□□□□ -0.86
CHD3-216ENST00000573936 GRHPRQ9UBQ7 328 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 DNAJB9Q9UBS3 223 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 EDARQ9UNE0 448 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 MGAT4BQ9UQ53 548 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 ACANP16112 2415 aa9.68□□□□□ -0.86
CHD3-216ENST00000573936 ARPC4-TTLL3A0A0A6YYG9 625 aa9.67□□□□□ -0.86
CHD3-216ENST00000573936 ARRDC5A6NEK1 342 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms